Scleropages formosus (Asian bonytongue): 108932404
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Entry
108932404 CDS
T04919
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108932404 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108932404 (trip12)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108932404 (trip12)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
HECT type E3
108932404 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
Motif
Other DBs
NCBI-GeneID:
108932404
NCBI-ProteinID:
XP_029111260
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All DBs
Position
10:complement(29440172..29461888)
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AA seq
2037 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNSAAAQPHDDAVAGRLQSEQVKGKANSPPESRRPISKASKAQ
PTGHRSRRSGLSLSVASLVLQDDPVGAGTSEPEHTGQAKREGTRGLKRSSAPEQNNSSPS
PAKKPKALAPSDSSSEARRAPAKSKKRGLAPEQATSSSRVQNRKSGAAGASPTQKRKRAD
ASAGPLPAGTEGRPVKPTKLASKPAGSARAGCSTVTDTSSSASSSSSSSATACSAASQGA
RLKQGKDQSKARRSRSASSPSPRRSSRDKEQPKTAGTSKFDWAARFSPKVNLPKPKLSLP
GSSKPETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRSARQKTTGSCASTSRRGS
GLGKRGAADARRQEKMADADNSQDGANPSSTRTDEVPQGASASGSVAGAVGMTSGESESD
DSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQ
LQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPR
SSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFS
INAQRNALAIAANCCQSITPDEFHFVSDSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQ
HEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFSLMCSNCPSLAVQLMKQNI
AETLRFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDTMLKKGS
AQMTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNAMQQIN
EDTGTARAIQRKPNPLASPNASGHAEVRKEDARALLMKEDPELARCFIKTLFGVLYEVYS
SSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAE
ILMQKLPDVFSVYFRREGVMHQVKNLAESETFLTSPPKACSSGSTSLCAPPVGTVTTATS
ATSDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKS
PTATQSPKSSFLASLNPKTWGKLGAQSNSAASEPSRTAGASGLPRPTPKDSISNNREKIK
AWIKEQASKFVEHHFNSENVDCSNPALNVLQRLCTATEQLDLQVDSGTECLVEIRSIVSE
SDVSSFEIQHSGFVRQLLLYLTSNSEKDAVSRDVRLKRFLHVFYGCSVPGTETMARLDPS
ENGPLLALVHKMNSCLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPD
CTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFL
SSGNVRHRLQFCMGDQPLPYSMTVYQAVRQFSLQAEDERESTDDESNPLGRAGIWTKTHT
IWYKPVREEEDGNKDVVGGKRGRAQTAPTKTSPRNAKKQDELWHDGVCPSVTNPLEAYLI
SEPPEGITFEDPSLDVILLLRVLHSISRYWFYLYDNAACKEIVPTSEFINSKLTAKANRQ
LQDPLVIMTGNIPSWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQS
DSQDSRVAPRLDRKKRTINRDELLKQAESLMQDLGSSRAMLEIQYENEVGTGLGPTLEFY
ALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIFSSRGLFAVPFGRTTKPAHMAKVKM
KFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEASISSHDLVNIDPAVARSIQHLEDI
IRQKKQLERDRSQTRESLQLALESLSMNGCSVEDLGLDFTLPGFPHIELKKGGKDVPVTI
HNLEEYLRLVVYWTLNEGVSKQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWD
VKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPP
LTIVRKTCEATENPDDFLPSVMTCVNYLKLPDYSSMEIMRQKLLIAAREGQQSFHLS
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgacgttcacagaggaacagt
gctgcggcccagccacacgacgacgcagtcgcaggaaggttgcagtcagagcaggtaaaa
ggtaaagcaaattccccacctgaaagtagaagacctatttctaaggcttcaaaagcccaa
cctacagggcatcgctcgagaagaagcggcctttctctgtcagtggcttcacttgtactg
caagacgacccagttggtgcagggacatcagaaccagagcacacaggccaggcaaagaga
gaggggacccgcggactgaagcgcagctcggccccagagcaaaacaattcttcccccagc
cctgccaaaaagcccaaagcacttgcaccttcggacagctcctctgaggccagacgagct
ccagccaaatccaagaagagaggtttggcgcctgagcaggccacctccagcagccgggtc
cagaacaggaagagtggagcagctggggcgtccccgacccagaaacggaaaagggctgac
gcttccgcgggtccactccctgctggtaccgagggcagacctgtaaaaccaaccaagctg
gcttctaaaccggccggctcagccagagctgggtgcagcaccgtgacggatacctcctct
tcggcctcctcctcatcctcctcgtccgccacagcctgtagtgcagcatcacagggagcg
cgactcaagcaggggaaggaccagagcaaggctcgccggtcccgctccgcatccagcccc
agtccacgccgtagcagtcgggataaggaacagcccaagacagccggaacttccaagttt
gactgggctgcacgcttcagcccaaaggtcaacctgcctaaacccaagctgtctcttccg
gggtcctccaagccagagacgtctaaaccagggccctctggtctgcaggccaagctagcc
agcctaaggaagtccaccaagaagcgtagcgagtcgccccctgcagagctccccagtttc
cggcggagcgcacggcagaagaccacgggctcctgcgccagtaccagtcggcgaggctca
ggcctgggcaagcgcggtgcagccgacgctcgccgacaggagaagatggccgacgctgac
aacagccaggatggggccaacccttccagcacgcgcacggacgaggtgccgcagggggcc
tctgcctctggctcggtggctggagcagtaggcatgacgtcaggggagagtgaatctgac
gactctgaaatgggccgactgcaagccctcctggaggccagaggcctgcctccacacctg
tttgggcccctgggaccccgcatgtcacaactgttccacaggacgataggtagtggcgcc
agttccaaggctcagcagctgctccaaggcctacaggccacaggcgatgaatcgcagcag
ctgcaagcagccatcgagatgtgccagctcctggtgatgggcaatgaggagacgctggga
ggcttccctgtgaaaagtgttgttcctgctctaattacactgttacagatggagcacaac
tttgacattatgaaccatgcttcccgtgcactcacctacatgatggaggctctgcctcgt
tcctcagctgtcgtcgtggatgccattcccgtttttctcgagaagctgcaagtgatccag
ttcatcgatgtggccgagcaggctttgactgcgctggagatgctgtcccgtcgacacagc
aaagctatcttgcaggctggtgggctggctgactgcctgctgtacctggagttcttcagc
atcaatgcccagaggaatgcccttgccattgctgccaactgctgccagagcatcacccct
gatgaattccactttgtctcagattcgttgcccttactcacccagagactcacacatcag
gacaagaagtctgttgagagcacttgcctctgctttgccagacttgtggataactttcaa
catgaagagaacctgctgcagcaggtggcatcccgggacttgctgacaaacatccagcag
ctgctcgtggtcactccacctgtgttgagctcaggaatgttcatcatggtggtgcgcatg
ttctcgctcatgtgctccaactgcccctccctggctgtgcagctgatgaagcagaacatt
gcagagactcttcgcttcctcctgtgtggagcgtctaatggcagctgccaggagcagata
gaccttgtgcccaggagcccgcaggaactgtacgagctgacttccctcatatgtgagctg
atgccctgcctgcccagggagggcatctttgctgtggacaccatgctgaagaagggcagt
gcccaaatgactgagggtgctatctggcagtggagagatgaccgaggcttgtggcacccc
tacaatcgcattgatagccgcatcattgagacagcacaccagaatggtgaggatgagatc
agtttgtccactctgggccgtgtctacaccattgacttcaatgccatgcagcagatcaat
gaagacacgggcacagcgcgagccattcagaggaagccgaatcccctggccagccccaat
gccagtgggcatgcagaggtgagaaaggaggatgccagggcactgctgatgaaggaggac
cctgaactggctagatgcttcatcaaaacgctgtttggtgttctgtacgaggtgtacagc
tcctcggctggcccagccgtcagacacaagtgccttcgagccatacttaggattatttat
tttgcggatgccgagctgctgaaggatgtgttgaagaaccatgctgtgtccagtcacatt
gcctccatgctgtccagtcaggacctgaaaattgtggtgggagctctgcagatggcagag
attctcatgcagaagcttccagatgtgttcagcgtttacttcaggagggaaggtgtgatg
caccaggttaaaaacctagctgaatcagagacctttctcacaagcccaccaaaggcatgc
tctagtggatccacgagtctatgtgcccctcctgttggcactgttaccactgcaactagt
gccacctctgacctgggttcacccagcttccagcacagcatggatgattcgctagatctg
agtccacagggccggctgagcgacgtgctgaagaggaagcgcttgcccaaacgggggcca
cggaggccaaaatactctcccccgagggatgatgacaaagtcgacaatcaggctaagagt
cccactgccacccagtcccccaaatcttcattcttggccagcttgaacccaaagacatgg
ggcaagctgggtgcccagagtaacagcgcagcatcggagccctcacgcacagcgggggcc
agtggtcttccaagaccaacccccaaagactctatctccaataacagagagaagataaag
gcctggatcaaggaacaggccagtaaatttgttgaacaccacttcaactctgagaatgtt
gactgtagcaatccagcgctgaatgtactccagaggctttgcaccgctacagaacagctc
gacctgcaagtggacagtgggactgagtgccttgtggagatccggagcatcgtgtcggag
tctgatgtctcttcatttgagattcagcacagtggctttgtcagacagcttcttctctat
ctaacgtccaacagtgagaaggatgctgtcagtagagacgtgaggctgaaacgtttcctg
cacgtgttctatggctgttcggttccaggcacagagaccatggcgcgtctggatcccagt
gagaatggacctctgctggcgctcgtgcacaagatgaatagctgccttagtcagatggag
cagttccctgtcaaagtgcacgacttccccagtggcaacggcaccggtagcagaggctca
caggccttgaaattcttcaacacacaccagctgaagtgccagctgcagagacatccagac
tgtaccaatgtcaagcagtggaaggggggacctgtcaagattgaccctctggcactggta
caagccatcgagagatacctcgtagtgagagggtatgggcgtattcgagaggaggatgaa
gacagtgatgatgatggttctgatgatgaaattgacgaatcactggcggcacagttcctg
agctcagggaacgtgaggcacagactgcagttctgcatgggggaccagccgctgccctac
agcatgactgtttaccaggctgtgaggcagttcagccttcaggcagaggatgagcgtgag
tccactgatgatgagtccaaccctcttggtcgagctggcatctggaccaagacgcacact
atttggtacaaacctgtgagggaagaggaggatggcaataaggatgtggtaggaggcaag
agaggccgtgcccagactgcacccacaaaaacttcacctcgcaacgccaagaaacaggac
gagctgtggcatgatggcgtgtgccccagtgtaaccaacccattggaggcgtacctcatt
tctgagcccccggagggcatcacgtttgaggacccttcactggatgtcatcttgctcctc
agggttctccactccattagtagatactggttctacctatatgataatgctgcatgcaaa
gagattgttcccaccagcgagttcatcaacagcaaactgacagccaaggccaacaggcag
cttcaggaccccctagttatcatgactggcaacatcccctcttggcttacagagcttggc
aaaacttgccccttcttcttccccttcgacacaaggcagatgctgttttatgtgacagcg
tttgaccgcgaccgtgccatgcagcgcctgttggataccaaccctgaaatcaatcagtct
gactcgcaagacagccgtgtggcaccacgactcgatcggaaaaagcgcactataaaccgg
gatgagttattgaagcaggctgaatctttgatgcaggatctgggaagctccagagccatg
ttggagatacagtatgagaatgaggtgggtactggactgggccccaccctggagttctat
gccctcgtgtcccaggagctgcagcgagctgacctcgggctgtggaggggtgaggaggtc
acactagctaaccctaaaggaagccaggagggaacaaagtacatttttagttccagggga
ctgtttgctgttccatttggtaggaccaccaaaccagcacatatggccaaggtcaagatg
aaattccgcttcctaggcaagctcatggctaaagccatcatggactttaggctgctggac
ctgccacttggactcccattctataaatggatgcttcgtcacgaggcgtctatcagctcc
catgacctggtgaatattgaccctgccgtggccaggtctatccagcatctggaggacatc
atccgtcaaaagaagcagctggagcgggacagatcgcagacacgagagagcctgcaactt
gctctggagagccttagcatgaacggctgctccgtggaggacttgggcctggatttcacc
ttgcctggcttcccacacattgagctgaagaagggtggcaaggatgtgccagttacaatc
cataatctggaggagtacctcaggctggtggtatactggaccctgaatgaaggggtgtcc
aagcagtttgagtcatttcgggaaggatttgagtcagtcttccctctacatcacctgcag
tatttttatcctgaagagctggaccagctgctgtgtggcagtaagtctgagacttgggat
gtgaagacgttgatggaatgctgccggcctgaccatggctacacgcacgacagtcgtgcc
gtgcggttcctcttcgaggtgctcagtagtttcgatgcagagcagcaaaggctcttccta
cagtttgttactgggagccccagattgcctgttggagggttccgaagcctcaacccaccg
ctgaccattgttcgcaagacatgcgaggcgacagagaatcccgatgacttccttccctca
gtcatgacctgcgtcaactacctaaagctgcccgactactcgagcatggagataatgcgt
cagaaactgctgatcgcagctcgtgaaggacaacagtccttccacctctcctga
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integrated database retrieval system
