Scleropages formosus (Asian bonytongue): 108932418
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Entry
108932418 CDS
T04919
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108932418 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108932418 (prpf8)
Spliceosome [BR:
sfm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108932418 (prpf8)
Complex C
U5 SnRNP specific factors
108932418 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
108932418
NCBI-ProteinID:
XP_018604323
LinkDB
All DBs
Position
10:26152092..26167653
Genome browser
AA seq
2354 aa
AA seq
DB search
MATAFPYRPVPGAVPGGVPAGIPPGIPGGIPTGIPPPAQVPDYMSEEKLQEKARKWQQLQ
AKRYSEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLK
LLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHF
KRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDPEEDSSVVDWMYEHQPLKDNPKFVN
GTTYRHWQFTLPMMSTLYRLANQLLTDLVDSNYFYLFDLKAFFTSKALNMAIPGGPKFEP
LVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIK
TEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEYMEPFLKDTPLYTDNTANG
IALLWAPRPFNLRSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKH
RPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYN
FNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYI
FAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFM
RGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGI
KQNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERI
RRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRR
FSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRI
KRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIK
PADTEPPPLLVYKWCQGINNLQDVWETVEGECNVMLESRYEKMYEKIDLTLLNRLLRLIV
DHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEM
AGPPQMPNDFLSFQDIVTETAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPN
NENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKD
NPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFH
NRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKI
GLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEE
DQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINT
LFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGV
EGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPT
INRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQEL
DALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYW
IDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPG
SKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVD
DTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKT
AEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEK
FGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTI
TEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQ
QRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAA
NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKE
IRCIVMVPQWGTHQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMA
DNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQM
LLSDRFLGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQ
EGEIYNADREDMFA
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcgttcccttacaggcctgttcctggggctgttcccggaggtgtccctgca
ggcattcccccaggcattcctggagggattcctaccggcatccctcctccggcccaggtc
cccgactacatgtctgaagagaaactgcaagagaaagctcgcaaatggcaacaattacag
gccaagcgctactcggagaagcgaaagtttggttttgtggatgcccagaaggaggacatg
ccccctgagcatgtgcgcaaaattatcagggaccatggagacatgaccaacaggaaattt
cgccacgacaagagggtctaccttggtgccctgaagtacatgcctcatgctgtgttgaaa
ctactggagaacatgcccatgccttgggagcagattcgggatgtcccagtactgtaccac
atcactggagcaatctcctttgtcaatgaaatcccatgggtcattgagccagtctacatt
gcccagtggggctccatgtggattatgatgcgtcgggagaagagagaccggcggcacttc
aagcgcatgagattccctccatttgatgacgaggagccccctctggactatgccgacaac
atcttggatgtggaacccctggaagccattcagatggagctggatcctgaggaggattca
tctgtggtggactggatgtatgaacaccagccactcaaagacaaccccaagtttgtgaat
ggaacaacgtacagacattggcagtttaccctgcccatgatgtccacattgtaccgcctg
gctaaccagttgctcacagatctggtggatagcaattacttctacctgtttgacttgaaa
gccttcttcacctctaaggctcttaacatggccatcccaggagggcccaaatttgagccc
cttgtgagggacatcaatctgcaggatgaagactggaatgagttcaatgacatcaacaag
atcatcatcaggcagcccataaggacagagtacaagattgcattcccttatttgtacaac
aacttgccacaccacgttcaccttacctggtaccacacacccaacgtggttttcattaag
acagaagatccagatttgcctgccttctactttgaccctctcatcaacccaatctctcat
aggcactcggtgaagagccaggagcctcttcctgatgatgatgaggagtttgagttgcct
gagtatatggagcccttcctgaaggacacaccactttacactgacaacacagcgaatggg
attgctctcctctgggcccctcgccctttcaacctgagatcaggaagaacccgccgagct
attgatgtcccactcatcaagaactggtatcgtgagcactgcccggctggacagcctgtg
aaagtgcgtgtctcctaccagaagctgctcaaatattatgtgctaaatgccctcaagcac
agaccaccaaaagctcagaagaaaagatacctgttccgctccttcaaggccaccaaattc
ttccagtcaacaaagctggactgggtggaggtgggccttcaagtgtgccgacagggctac
aacatgctcaacctgctcattcacagaaaaaaccttaactacctgcatctggactacaac
ttcaacctgaagcctgtcaagaccctcaccacgaaggaacgtaagaagtcaagatttggc
aatgcgttccatctgtgtcgagaggttcttcgcctcagcaagctggtggtggatagccat
gtgcagtaccgactgggaaatgttgatgcgttccagcttgctgatgggctgcagtacatc
tttgcccacgtggggcagctcacaggcatgtacaggtacaaatacaagctgatgcgacag
atccgaatgtgcaaagaccttaagcatctcatctactaccgcttcaacactgggccggtg
ggaaagggcccaggatgtgggttctgggcaccagggtggagagtttggctgttcttcatg
aggggcatcacccctttgctggagaggtggctggggaatctgttggctaggcagtttgaa
ggtcgacactctaagggagttgccaagactgtcacaaagcaacgtgtggagtcccacttt
gacctggagttgcgagcggctgtgatgcacgatatcctggacatgatgcctgagggaatc
aaacagaacaaggctaggacaatccttcagcacttgagcgaatcctggaggtgttggaaa
gctaacattccctggaaggttcctggacttcctaccccaatcgagaacatgatcctccgc
tatgtgaaggccaaagctgactggtggaccaacacagctcactacaatcgggagcgaatc
aggcgtggtgccaccgtggataagacggtgtgcaagaagaacctgggccggctgacccga
ctctacctgaaggctgagcaggaaaggcagcacaactacctgaaggatggtccttacatc
actgcagaggaggctgttgccatctacaccaccactgtacactggttggagagcaggcgg
ttttcacccatccctttcccaccactgtcgtacaaacacgacaccaagctgctcattctg
gccctggagaggcttaaggaagcctacagtgtgaagtccaggctgaaccagtcacagcgt
gaggagctgggtctaattgagcaggcctatgacaaccctcacgaggcactgtccaggatc
aagcgtcacctccttacccagagagctttcaaagaggttggcatcgaattcatggacctg
tacagtcacctggttcctgtgtacgatgtggagcccctggagaagatcaccgacgcctac
cttgatcagtatctgtggtacgaggcggacaagcgcagactctttcccccatggataaaa
ccagctgacacagagccgcctccactgcttgtgtacaagtggtgccaagggatcaacaat
ctacaggatgtgtgggaaactgtggagggcgagtgcaacgtcatgctggagtcacgctat
gagaaaatgtatgagaagattgacttgacactgttgaacaggctacttcgtcttattgtg
gatcacaacattgctgactacatgacggccaagaataacgtggtcatcaactacaaggat
atgaaccacacaaattcctacggcatcatccgtggcctgcagtttgcttcgttcatcgtc
cagtactacggactggtgatggacctgctggttctgggtctccaccgggccagcgagatg
gctggaccccctcaaatgcccaacgacttcctgagctttcaggacattgtcacagagacc
gcccaccccattcgcctgtactgcagatacattgaccgcattcacatctttttcaggttc
tctgcagatgaggccagggacttgatccagaggtacctcactgagcacccagaccccaac
aatgagaatattgtgggctacaacaacaagaagtgctggcccagagatgcaaggatgagg
ctgatgaagcatgatgtcaacctgggtcgtgctgtcttctgggacatcaagaaccggctg
ccacggtctgtaaccacagtgcagtgggagaacagctttgtgtccgtctacagcaaggac
aaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcctgccaaagtgtcgc
accagctatgaggagttcacccataaggatggcgtgtggaacctgcaaaacgaggtgacc
aaagagaggacagcgcagtgctttctgcgtgtggatgatgagtccatgcagaggttccac
aacagggtcagacagatcctgatggcttctgggtctacgacttttaccaagattgtgaac
aagtggaacacagctctcattggtctaatgacctacttccgtgaggctgtggtcaacaca
caggaacttctggacctgttggtcaagtgtgagaacaagattcagacccgtatcaagatt
gggctgaactctaagatgcccagccgttttcctcctgttgttttttacacccctaaagag
ctgggaggacttggcatgctgtctatgggacacgtgctcattccccagtcagacctgagg
tggtccaagcagacagatgtgggtatcacacacttccgctctggtatgagccatgaagag
gaccaactgattcccaatctatatcgctacatccagccatgggagagcgagtttatcgat
tcccagagggtttgggctgaatacgctctgaaaagacaggaggccattgctcagaacagg
cggctgactcttgaggacttggaggactcttgggacaggggcatcccacgtatcaacacc
cttttccagaaagaccggcacacgttggcctacgacaagggctggagagtgaggacagac
tttaagcagtaccaggtcctgaagcaaaatcccttctggtggacccaccagaggcatgat
ggaaagctgtggaacttgaacaactaccgcacagacatgatccaggcactcggtggtgtg
gaaggcatcctggagcacacactcttcaagggaacctatttccccacctgggaaggtctc
ttctgggagaaggctagtggttttgaggaatccatgaagtggaagaaactcactaatgca
cagagatctggtttgaatcagattcccaaccgacgatttacactctggtggtcgcctaca
atcaacagggccaatgtgtatgtaggattccaggtgcaactggatcttactggcatcttc
atgcatggcaagatcccaaccctgaagatctccctaattcagatcttcagagctcacttg
tggcagaagattcatgagagcatcgtcatggatctttgtcaggtgtttgaccaagagctg
gatgcgctggagattgagactgtacaaaaggagacaattcaccccaggaagtcctacaag
atgaattcctcctgtgctgacatcctgctctttgcctcctacaagtggaatgtctcacgg
ccttctctgcttgcagactcaaaggatgtaatggatagcactaccactcagaagtactgg
attgacatccagctgcgatggggtgactatgactctcatgacattgaacgatacgccagg
gccaagtttctggactacaccacagacaacatgagtatctacccatctccaactggagtg
ttaattgccattgacctggcctacaatttgcacagtgcttatgggaactggtttcctggg
agcaagcccttgattcagcaggccatggcaaagatcatgaaggccaaccctgccctgtat
gtgctcagggagaggatccgcaaaggcttgcagctgtactcctctgagccaactgagccg
tacctgtcttcccagaactacggagaactcttctccaatcagatcatctggtttgtggat
gataccaatgtgtacagagtcaccatccacaagacctttgagggcaacttgaccacaaaa
cccatcaatggagccattttcatcttcaacccaaggactggacagctgttcttgaagatt
attcacacatctgtgtgggctgggcagaaacgtctaggacagctggcaaagtggaagaca
gctgaagaagtggctgctctcattcgctcacttccagtggaagagcagcccaagcagatc
attgttaccaggaaaggcatgctggacccactggaggtccacttgcttgatttccccaac
attgtgatcaagggctctgagctgcagttgccattccaggcctgtctgaaggttgagaaa
tttggagatctcattttgaaggctactgagccccagatggtcctgttcaatctctatgat
gactggctgaagactatctcctcctacacagcattctctcgactgatcttgattctgaga
gctctccatgtgaacaatgatcgggccaaggtgatcctgaaaccagacaagaccacaatc
acagagccccaccacatctggcccacccttaccgatgaggaatggatcaaggtggaggtg
cagctcaaagatctcatcttggctgattatggcaagaagaacaatgtaaatgtggcatca
ctgacccagtctgagatcagagacatcattctggggatggagatctctgctccatcgcaa
cagaggcagcagattgctgagattgagaaacagaccaaagaacagtcccagctgactgcc
acacagacccgcacggtcaacaagcatggtgatgagatcattacctctaccaccagcaac
tatgagacgcagaccttctcctccaagacagaatggagagtgcgagcaatttctgctgcc
aatttgcatctgcgcacaaaccacatctacgtgtcatccgacgatatcaaggagacggga
tacacttacatcctccccaagaacgtcctgaagaagttcatttgtatctcagatctccgt
gcacagattgctgggtacctgtatggaacgagccctccagataacccccaggtaaaggag
atccgctgcattgttatggtaccccagtggggaacacaccagaccgttcacctgccaaac
cagcttccccagcatgagtatctgaaggaaatggagccgcttggctggatccacactcag
cccaatgagtcgcctcagctttccccgcaagatgttactacccacgctaagattatggca
gacaacccatcctgggatggagagaagaccatcatcatcacctgcagttttacaccaggt
tcatgcactctgacagcctacaagctcacccctagcgggtatgagtggggaaggcagaac
acagacaagggcaacaatccgaagggttacctaccgtcccattacgagagggtgcagatg
ctgctatctgatcgcttccttggatttttcatggttcctggacaagtctcctggaactac
aactttatgggtgttcgccacgacccgaacatgaagtacgacctgcaactcgccaatccc
aaggagttttaccatgaggtccaccggccctcgcacttcttgaacttcgcctcgctgcag
gagggcgagatctacaacgctgaccgtgaagacatgtttgcttaa
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integrated database retrieval system
