Scleropages formosus (Asian bonytongue): 108932471
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Entry
108932471 CDS
T04919
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108932471 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108932471 (dhx36)
03012 Translation factors [BR:
sfm03012
]
108932471 (dhx36)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108932471 (dhx36)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108932471 (dhx36)
Translation factors [BR:
sfm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108932471 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
NB-ARC
ATPase
AAA_19
nSTAND3
TsaE
NACHT
Motif
Other DBs
NCBI-GeneID:
108932471
NCBI-ProteinID:
XP_029111621
UniProt:
A0A8C9SCT2
LinkDB
All DBs
Position
10:complement(30150541..30163631)
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AA seq
1019 aa
AA seq
DB search
MSYGYGSRRGRRGGRSFGDGGDDERWDRHRGTTWAGAGAGGAGPGASGGGGGGAAQRNLG
WEEQGASAGRGGGSRGRHPAHLKGREIGLWYAKRGGMKRKEEERKSRAVVQMDESREEHI
TQLLNKVQRDTPAAASSGAAGATPVKQHSYFDGEEPPKEAPPAERKEVKETPKDRSLEFL
FQELVRNSTLDQELKRDLQSKRSDQKYLEMLKFREKLPSYGMKEELVQLIRANQVMVVSG
ETGCGKTTQVTQFILDDSIQRGMGSICRVVCTQPRRISAISVAERVAAERAEAVGEGNSC
GYQIRLQSRLPRKQGSMLYCTTGIILQWLRSDPHLSSVSHLVLDEIHERNLQSDVLITII
KDLLRVREDIKVILMSATLNAEKFSRYFGNCPMIHIPGFTYPVKEYLLEDVVQMLRYRPQ
SQDRRPKWKRRFMQGQMSRPEKEQKEEEYQESWPCYARTLRDRYSDSTIEVLEMMDDDDK
VDLSLIVELIKYIVLQEEDGAILVFLPGWDNISGLNDLLMAQQMLKSDKFIIIPLHSLMP
TVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAE
WVSLANAKQRKGRAGRVSPGKCYHLYNGLRASLLDAYQLPEIQRTPLEELCLQIKILKLG
RIASFLQKAMDPPSEQAVQLAITHLMELNALDHHEELTPLGFHLARLPVEPHIGKMILFG
ALLGCLDPVLTIAASLSFKDPFFIPLGKEKLADMRRKALSKNSKSDHLTVVNAFWGWEEA
KRRGYKCEREYCWDNFLSANTLQMLHNMKGQFAEHLLCAGFVSSKDPKDPASNINSDNEK
LLKAVIVAGLYPKVAKIRPSFSKKRPGVKVYTKADGKVNIHPKSVNAEETEFHYTWLIYH
LKMKTSSIFLYDCTEVSPFSLLFFGGDISIQKDQEQDTIAVDEWIVFQSPARIAHLVKNL
KTELDSLLEEKIKNPQPVDWSNSKSKDCAVILAIIDLITTQESNAGSSGGTQAGGRYYD
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggttacgggagtcggaggggccggaggggcggccggagcttcggggatgga
ggtgacgatgagcgctgggaccgtcaccgtggaaccacctgggccggggccggggccggc
ggagctgggcctggggcgagcggcggcggcggcggcggcgcggcccagaggaacctcggc
tgggaggagcagggagcctcagccgggcgaggcggggggtctcggggccgccatccggca
catctgaaaggccgggagatcggcctgtggtacgcgaagaggggcggcatgaagcgaaaa
gaggaggagaggaagtcgagggctgtggttcagatggacgagtccagagaggagcacatc
actcagctgctgaacaaggtccagagagacacacctgctgctgcttcctcaggggctgca
ggggcgacaccagtgaagcagcacagctacttcgatggtgaggaacctccaaaggaagcg
cctcccgctgagcggaaggaggtgaaagaaacgccgaaggacagaagcctggaatttctg
ttccaggagctggtgcgcaattccactctcgaccaagagctcaagagggacctgcagtca
aaaaggagcgaccaaaagtacctggagatgctgaaattccgagagaagctgccttcgtat
gggatgaaggaggagctggtccagctgatccgggccaaccaggtcatggtggtgagcggc
gagacgggctgtgggaagactacacaggtcacccagttcatcctggatgacagcatccag
cgtggaatgggttccatctgcagggtggtgtgcacccagccgcggcgcatcagtgccatc
tctgtggcagagcgggtggcggcagagcgggctgaagccgtgggggaggggaattcctgc
gggtaccagatccgactgcagagccggttaccacggaaacagggttccatgctgtattgt
accacaggcattatcctgcagtggcttcgctctgatcctcacctgtcgagcgtcagtcac
ctggttctggacgagatccacgagcgcaacctgcagtcagacgttctcatcaccatcatt
aaagacctgctgcgcgtccgcgaagatatcaaagtgatcctcatgagtgccactctcaac
gctgagaagttctccagatactttggtaactgtccaatgatccacatccctggctttacc
tacccagtgaaggagtacctgctggaggacgtggtacagatgcttagatatcggcctcag
tcgcaggaccgccgacctaagtggaagcgacgcttcatgcaaggccagatgtctcggccc
gagaaggagcagaaggaggaggagtatcaggagagctggccttgttacgcgcgcacgctg
cgagacagatactctgacagcaccattgaggtcctggagatgatggacgatgacgacaag
gttgacctgtcactcatcgtggagctcatcaaatacatcgtgctgcaggaagaggatggt
gccatcctggtcttcctgcctggttgggacaacatcagtggtcttaatgatcttctcatg
gcccagcagatgttaaagtcagacaagttcatcatcattccactgcattccttgatgcca
acagtcagtcagacgcaggtgtttaagaagcccccaccaggagtgcggaaaatcgtgatc
gctaccaacatcgctgagaccagcatcaccatcgatgatgtcgtctatgtgattgatggg
ggaaagatcaaggagacacattttgacacccagaacaacatcagcaccatgacagctgag
tgggtgagcctggccaatgccaagcagaggaaaggccgtgccggcagggtctccccaggg
aagtgctaccacctgtacaatggccttcgagctagtcttctggatgcctaccagctgcct
gagatccagcgcacaccactggaggagctctgtctgcagatcaagatcctgaagttgggc
agaatcgcctcattcctgcagaaggccatggacccgccctcagaacaagcggtgcagctg
gccatcactcacctgatggaactgaatgccctggaccaccacgaggagctgaccccccta
gggttccacctggcccggctgccagttgagccccacattgggaagatgatcttgttcggg
gcacttctgggctgtctggaccctgtgctcaccatcgcagccagcctgagcttcaaggac
ccattcttcatccccctgggcaaagagaagctggcagacatgaggagaaaagccctgtcc
aagaactccaagagcgaccatctcaccgtggtcaatgccttctggggctgggaggaagcc
aagagacggggctacaagtgcgagcgcgagtattgctgggacaactttctgtcagccaac
acgcttcagatgttacacaacatgaagggtcagtttgcagaacacctgctctgtgcagga
tttgtcagcagcaaggacccaaaagatcctgcctccaacatcaactcagataatgagaag
ctcctcaaagcagtcatcgtggccggcctgtaccctaaagtcgccaagatccggccaagt
ttcagcaagaagcggcccggcgtgaaggtttacaccaaggccgatggaaaggtgaacatc
cacccaaagtcagtgaatgcagaggagaccgagttccactacacctggctcatctaccac
ttgaagatgaagaccagcagtattttcctctatgactgcacagaagtgtctccattctca
ctgctcttctttgggggagatatttccatccaaaaggatcaggagcaggacaccatagct
gtggatgagtggatcgtgttccagtccccagcccgcattgcccacctcgtcaagaatctg
aagacagagctggactccctccttgaggagaagatcaagaacccccagcccgtggactgg
agcaactcaaagtccaaggactgtgctgtcattctggccatcattgacctcatcacgacg
caggagagcaacgcaggctcttctggtggaacccaggctggaggcaggtactacgactaa
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