Scleropages formosus (Asian bonytongue): 108932480
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Entry
108932480 CDS
T04919
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108932480 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108932480 (copb2)
Membrane trafficking [BR:
sfm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108932480 (copb2)
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108932480 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
108932480
NCBI-ProteinID:
XP_018604439
UniProt:
A0A8C9S2G7
LinkDB
All DBs
Position
10:27240568..27250548
Genome browser
AA seq
943 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERAWCVAGLRGSNSVALGYDEGSIIIKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPEFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSDKVAAAQESNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAVARCQFGLAQECLHHAQDYGGLLLLATASGNAGMVSRLAEGAE
RDGKNNVAFMTYFLQGKLDCCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLRESFLAEQYLKETTGKLRPARDYPLVMPNEDRNVLEEAK
DYEPKGVPETTEEVAEVNKEAQPAAAFFEAAAAVVSVVATASGVGRDKEEGREDKAAPPA
QQSSPEDKSTEADLDDLDEDLDNLDLEDVDTADVNLDDDFLDD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgactagacatcaagcggaagctgacggcccgctcggaccgcgtgaaaagc
gtggacctgcatcccactgagccatggatgctggccagtctctacaatggcagcgtgtgt
gtgtggaaccatgagacacagacactggtgaaaacatttgaagtgtgcgatctccccgtg
agggcctccaagtttgtagcgaggaagaactgggtcatcacaggagcagacgacatgcag
atccgcgtgttcaactacaacacgctggaacgtgtgcatatgttcgaggcccattccgac
tacattcgctgcattgctgtgcacccgacgcagcccttcattcttacaagcagtgatgac
atgctcatcaagctgtgggactgggacaaaaagtggtcctgcagccaagtttttgagggc
catacccactacgtgatgcagatagtgatcaaccccaaggacaacaaccagtttgctagc
gcctctctcgacagaaccatcaaggtctggcagcttggctcatcttcgcccaacttcacc
ctggagggtcatgagaagggtgtcaactgcattgactactacagcgggggagacaagccg
tacctcatttctggtgcggacgaccgactggtgaagatctgggactaccagaataagaca
tgtgtccaaacattggagggacacgcccagaatgtgtcctgtgtgagcttccacccagaa
ctgcctatcattatcaccggctcagaggacggcaccgtgcggatctggcactcaagcacg
taccgcctggagagcacgctcaactatggcatggagcgagcgtggtgtgtggcgggtctg
cgcggctccaacagcgtggcactcggctacgacgagggcagcatcatcatcaagcttggc
cgcgaggagccggccatgtccatggacgccaacgggaagatcatctgggcaaagcattca
gaggtgcagcaggccaacctgaaggccatgggtgatgccgagatcaaagacggggagcgc
ttgcccctggcagtcaaagacatgggcagctgcgagatctaccctcagactatccagcac
aaccccaacggcaggtttgtggtggtgtgtggagacggagagtatatcatctacacggcc
atggcgctgaggaacaagagctttggctccgcacaggagtttgtctgggcccacgactcc
tctgagtacgccatccgggagagcaatagcgtggtgaaaattttcaagaactttaaagag
aagaagtccttcaaaccagagtttggggcagaaggtatctacggcgggttcttgctgggt
gtgaggtccgtgaacggtttggccttttacgactgggagaacacagagctgatccgacgt
atcgagattcagcccaaacatatattctggtcggactcaggcgagctggtgtgcattgcc
actgaggagtcctttttcatcctgcggtatctgtcagataaggtagcagcagcgcaggag
tccaacgagggtgtgacagaggatggcatcgaggacgcctttgaggtccagggcgagatc
caggagattgtgaagacaggcctctgggtaggagactgcttcatatacaccagctccgtc
aacagactcaactacttcgtaggtggagagatcgttaccatcgctcacctcgacaggacc
atgtacctgctgggctacatcccaaaggatgatcgtctctacctgggagacaaggagctg
aacatcgtcagctactcgttgctggtttccgtcctggagtaccagacagccgtcatgcgc
agggacttcagcatggccgacaaggtgctgcccactatccccaaggagcagaggactcga
gttgcccacttcctggaaaagcagggcttcaagcagcaagcgctggcggtctcaacggac
cccgagcaccgcttcgaactggcgttgcagcttggggagctcaaaattgcctaccagctg
gctgtggaagcagagtcggagcagaagtggaagcagctggcggagctggccgtcgcgcgg
tgccagtttggcctggcacaagagtgtctccaccacgcccaggactacggaggactcctc
ctgctggccactgcctccggcaacgctggcatggtgagccgcttggctgagggcgccgag
cgcgacggcaagaataatgtggccttcatgacctacttcctgcagggaaagctggattgc
tgcctcgagctcctgatccgcaccaaccgcctgccggaggcggctttcctggcccgcacc
tacctgcccagccaggtgtccagggtggtgaagctgtggagggagagtctgtccaaagtg
aaccagaaggcggccgagtctctggcggaccccacggagtacgagaacctgtttcctggc
ctgagggagtccttcctggctgagcagtacctcaaggagaccactgggaagttgaggccg
gccagagactaccccctcgtcatgcccaatgaggacaggaatgtgctggaggaggccaag
gactacgagcccaaaggagtccctgagaccacagaggaagtggcggaggtcaataaggag
gctcagccggccgcagcattttttgaggcagctgcggctgtcgtttcggttgtggcgact
gcctcgggagtgggcagagacaaggaagagggcagggaggacaaagctgcaccaccagct
caacagtcttcacccgaagacaaaagcacagaggcggaccttgacgatctggacgaagat
ctggacaaccttgatttggaggatgtcgacacggcggatgtcaacctagacgatgatttc
ctagacgactaa
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