Scleropages formosus (Asian bonytongue): 108932882
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Entry
108932882 CDS
T04919
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfm03009
]
108932882 (ddx21)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108932882 (ddx21)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108932882 (ddx21)
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
Pre-60S particles
Helicases
108932882 (ddx21)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108932882 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108932882
NCBI-ProteinID:
XP_018605094
UniProt:
A0A8C9SED0
LinkDB
All DBs
Position
4:complement(6713235..6723777)
Genome browser
AA seq
739 aa
AA seq
DB search
MPAKIVLETNDAEMDDSEETTVKEKKALKKLKKEKVKDKRKKKPADEETDEHEPPSPKKK
KTEHGANGKLPKKKKKSSSTSETPLMKTPSHSSESECNSSGPEERTKKQRKKAAVNGDTV
QTPSKLNGCSTESSSLHSSNDSESDKEVEETPEQKEGAFSNFRISKETIRLLQARGVTYL
FDIQAKTFNSVFDGKDVVAQARTGTGKTFSFAIPLIERLTATVDRKRGRPPKVLVLTPTR
ELAIQVAKDFKDITKRLSVACFYGGSPYNPQMDSIRNGIDILVGTPGRIKDLYQNSKLNL
SELKHVVLDEVDQMLDMGFAEQVEEILAASYKKGSESNPQTLLFSATCPHWVYDVAKKYM
RPQCEHVDLIGKKTQKTATTVEHLAISCHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKE
ATELSLNTSIKQNTQSLHGDIPQKQREITLKGFRNGAFEVLVATNVAARGLDIPEVDLVI
QCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEQQLRYVENKAGIKFKRVGVPTAND
IIKSSSKDAVRYLDGIPSTVIEYFRSAAEKLIEERGAVPALAAALAHISGATTLEERSLL
NSDVGYKTIVLKCSQEMHSIGYAWRALKEQLGEEIDDQIQRMTFLKGKTGVCFDVAAAKA
KDIEEVWQNGRRWQLSIPTELPELEESNWKGGDRPAGGNSRSFRGDRRGAGRRGQGRSFG
NNNRRGGGVKRSHSRAFDY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaaaaatagtgcttgaaaccaacgacgctgagatggatgacagcgaggaaacc
accgtaaaggagaaaaaagcacttaagaaactaaaaaaagagaaggtcaaggataagaga
aagaagaagccagctgatgaagagaccgatgagcatgaaccaccgagcccaaagaagaaa
aagacggaacacggagccaatggcaagttgccgaagaagaagaagaaatcgagtagtacc
agtgaaacacctttaatgaaaacaccatcacattcatcagaatctgagtgcaatagctca
ggccctgaagaaagaacaaagaaacaacgtaagaaggcagcagtcaatggagacacagtg
cagactcccagtaagctcaacggctgttctacagagtcgtcctctcttcattcaagcaac
gacagcgaaagcgacaaagaagttgaagagacgccagagcagaaagagggtgccttctct
aattttcgaatttcgaaggagaccatcagattacttcaagcccgaggtgtgacatacctg
tttgacatccaagccaagacattcaactctgtgtttgatgggaaggatgtggtggcccaa
gcgaggaccggcactggaaagactttctcttttgccatccccctcattgagaggctgaca
gccactgtggacaggaaaagagggcgacctccaaaggtccttgttcttactcctactaga
gaacttgctattcaggttgccaaggatttcaaagatatcacaaaaagattgtctgttgcc
tgtttctatggtggcagcccctacaatccccaaatggacagcattcgcaatggcatcgat
attctagtaggtaccccaggccgaattaaagacttgtatcagaacagcaaactgaatctc
tctgagctgaagcacgtggttctggatgaagtggaccagatgctggacatgggcttcgcg
gaacaagtggaggagatcttggcagcttcctacaaaaaaggctcagaaagcaacccccag
acgctgctcttctctgccacgtgcccccactgggtgtacgatgtggccaagaagtacatg
cggccgcaatgcgagcacgtcgacctcatcggaaagaagacacagaagactgccactacc
gtggaacacctggccatttcatgtcactggtcccagagggcagcggtcatcggagatgtg
atccaggtctatagcggtagccacggacgcaccatcgtcttttgcgaaaccaagaaagag
gccactgagctgtcactcaacacctccataaagcagaacacccagtctttgcatggagac
attcctcagaagcagagggagatcacgctcaaaggcttcaggaatggggcctttgaggta
ctggtggctaccaatgtggcagcccgtggcttggacattccagaggttgatctggtcata
cagtgttcacccccaaaggatgtggaatcctacatccatcgatcaggtcgaacaggcagg
gctggccggacaggtgtatgcatctgcttctaccagcgcaaagaagaacagcaactccga
tatgtggagaacaaagctggcattaaatttaagcgagttggagtaccaactgccaacgat
atcatcaagtcctccagtaaagatgcagtacgatacctggatggtataccatctacagtg
attgagtacttccgctcggcggcggaaaagctgattgaggaacggggggccgttccagcc
ctggcagctgccctcgcccatatttctggggccaccacccttgaggagcgctctctcctt
aactctgatgtgggatacaagaccattgtgctgaaatgttctcaagaaatgcacagcatc
ggctatgcatggagggccctgaaggagcaactgggagaggagattgatgatcagattcag
aggatgacgttccttaaggggaagactggtgtctgctttgatgttgcggcagctaaagcg
aaagacattgaggaggtctggcagaacggtcgacgctggcagctgtcgatacccacagag
ctcccggagctggaagaaagcaattggaagggtggggaccggccagctggtgggaacagc
cgttccttccgtggcgacagacgcggagccggacgcagaggtcagggccgtagctttgga
aacaataatcgaagaggaggcggtgtgaaacggagccacagcagggctttcgattactaa
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