Scleropages formosus (Asian bonytongue): 108933055
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Entry
108933055 CDS
T04919
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108933055 (chd1l)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108933055 (chd1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
AAA_22
SWI2_SNF2
LBD_receptor
CSNKA2IP
Motif
Other DBs
NCBI-GeneID:
108933055
NCBI-ProteinID:
XP_018605380
LinkDB
All DBs
Position
1:20727347..20744258
Genome browser
AA seq
1006 aa
AA seq
DB search
MSKFLCEVRKNIPEKKESKLSETQLRTWGLKGLQLRPYQLGGVRWLSQCLKNQEGCILGD
EMGLGKTCQTVSLLVYIRGSQGHEGPFLILSPLSVLENWREEMERFSPGLSVICYRGDKE
KRAELQSELKTGRRFHVLLTTYELCLKDASFLRRWQWRVLVVDEAHRLKNQNSVLHNMLS
EFSFGFKVLLTGTPIQNNLQEVYALLSFIQPSIFPKSEVDDFVSTYSQVETQPVLASELH
SILKPFLLRRVKAEVAAELPRKIELVVYHGMSALQKRYYKAILMKDIDAFENEQGSKTRL
LNILMELRKCVNHPYLFDGVEPEPFEMGEHLIEASGKLCLLDSMLRFLHQGGHRVLLFSQ
MTRVLDILQDYMEYRGYSYERLDGSVRGEERNLAIKNFSSKDVFVFLLSTKAGGVGMNLT
SADTVIFMDSDFNPQNDLQAAARAHRIGQKRAVKVIRLLGRDTVEEIIYSRAASKLQLTN
TIIEEGRFSLLDQAQSAEAGLQLSEILKFGVDKLLASEESSVQDVDLGLILGRTEGGQWL
VDEEPCLPSKEEDTSLINSQNHMYIYEGRDYSRDPSSEDQRCFDQLVEELQTYLEAAQEG
RALRYKAGVSLSGPLVAPLRRKRVLTEAELELRREKRREAAAKKARLQEDRKRQREEQQY
RRKIAWWESCGYHSLCLPLADSDEDDEEAGEEGDDISISSVASEHTDIHYILGDVTHPQA
NQEDAIIVHCVDDSGHWGRGGLFTALEVRSDEPRKQYELAGKMKDLALGHVLLFPIDDKQ
SRLDGQDELALIVAQERDQSNNLSGIKLPALEEGLKKIHRVAKQKKASVHLPRIGHSTKG
FNWYGTERLIRKHLASRSILTYIYYFPRKASSRALAIPSSSSSPSVFSAAPSSSSSTSGV
GKDTMPVRNKMPDFMGGVHVFFYNIAASDRKSLARYLITYDGDEEEVMGSEVTHIVADVE
SPVHKRELQNLLNEHPQALPVQKTWLESCFSKQKRVSTTEFLLELH
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttcctttgtgaggttcggaaaaacatcccagagaaaaaggagtcgaagctg
tcggagactcagctgaggacgtggggcctgaaaggactccagttgaggccctaccagttg
gggggagttcgttggctctcccagtgcctaaagaaccaggagggatgcatccttggtgat
gagatgggcctgggaaagacatgccaaactgtttctttgctggtgtatataagggggagc
caagggcacgaaggacccttcttgatccttagccctctctctgtcttggagaactggagg
gaggagatggaacggttctctcccggcttgtcagtgatctgttacaggggggacaaagaa
aagagggctgagctgcagagtgaactaaaaacagggaggcgctttcatgtgctgctcacc
acttacgaactatgtctcaaagatgcatcattcttgagaaggtggcagtggagggttctg
gtggtggatgaggctcacagactgaagaaccagaactctgtactacataacatgctgtct
gagttttcatttggcttcaaggtgttgctcacagggacgcccatccaaaacaacctgcag
gaggtctatgcccttctgagcttcattcaaccctccatctttcctaagagtgaggtggat
gactttgtcagcacttattcacaggtggaaactcaaccagttcttgctagtgaactacac
agcatccttaagcccttcctgctgcgcagggtgaaggcagaggtggcagctgagctgcca
aggaaaatagagctggtggtctaccatggcatgtctgccctgcaaaagagatactacaaa
gccatcctcatgaaggacattgatgcatttgaaaacgaacagggcagcaaaaccaggctg
ctaaatatcttaatggaactgagaaaatgtgtcaatcatccgtatctgtttgatggggta
gaaccagagccttttgaaatgggggagcatctcattgaggccagtgggaagctgtgcctc
ctagacagcatgctgagattcctgcaccaggggggtcaccgagtgttgctgttctctcag
atgacaagagtgttggacattctgcaggactacatggagtatagaggctacagctatgag
cggttggatggctctgtccgaggtgaggagcggaaccttgccatcaagaacttcagcagc
aaagatgtgtttgtcttccttctgagcaccaaagcaggaggtgttgggatgaacctgaca
tcagcagacactgtgattttcatggacagcgatttcaacccccagaatgacctgcaagct
gctgctcgtgcccacaggattggtcagaaaagggctgtgaaggttatcaggctactggga
agggacacagtggaagagattatatactcgcgagctgcgtccaagctgcaactgaccaac
acgatcatcgaggagggccgcttctctctgcttgaccaggcccaatctgcagaagctgga
ctccagctgagtgagatccttaagtttggggtggacaagcttttggcttcagaggaaagc
tctgtgcaggatgtggacctggggctcatcctgggacggacagaggggggtcagtggttg
gttgatgaggagccctgccttccaagcaaggaagaggacacatcgctcattaacagtcag
aaccacatgtatatctatgagggacgggactactccagggacccaagctcagaggaccag
agatgttttgatcagctggtggaagaattgcaaacctatcttgaggctgcacaagagggg
cgagcccttcgctacaaggctggtgtctctctctccgggcccctggtagccccattgcgc
agaaagagggtactgactgaagctgagctggagctgagacgtgagaagagaagggaggca
gccgctaagaaagctaggctacaggaggacaggaagcggcagcgggaggagcagcagtac
aggaggaagattgcatggtgggaatcatgtgggtaccactctctgtgcctgcctcttgct
gacagtgatgaggatgacgaggaagcaggggaagagggtgatgacatcagcatcagctcc
gtggcttcggagcacacagacatccactacatcctgggggatgttactcacccacaggcc
aaccaggaggatgctattattgtacactgtgtcgatgactctggtcactggggacgaggt
ggattattcaccgcgctggaggtgaggtcagatgagcctcggaagcagtatgagcttgct
ggcaaaatgaaagatttggctcttggtcacgtgctgctgtttccgattgatgacaaacag
tccaggctggatggccaagatgaactagccttgatcgtggctcaggagagagatcaatcc
aacaatctgtcaggaataaagctccctgccttggaggagggtttgaagaagatccacagg
gtggctaaacagaagaaagcaagtgtacacctcccaaggataggtcactccaccaagggc
ttcaactggtatggcacagagaggctcattcgcaagcacctagcctccaggagcattctc
acttacatatattactttcctagaaaggcatcctcccgagcattggccataccttcatct
tcatcgtccccatctgtattttcagcagctccctcatcttccagcagcactagtggagtg
ggcaaggacacaatgccagtccgcaataaaatgcccgatttcatgggtggagtccatgtc
ttcttctacaacattgctgcctcggacaggaagagtcttgcacgctacctcatcacttat
gatggtgatgaagaagaggtcatgggttcagaagtcacgcacatagtggctgacgtggaa
agccctgtccacaaacgggagctccagaacctcttgaatgaacatcctcaggcgcttcct
gtccagaagacatggttggagtcctgtttttctaaacaaaagagagtcagcactactgag
ttcctccttgagctgcactga
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