Scleropages formosus (Asian bonytongue): 108933128
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Entry
108933128 CDS
T04919
Symbol
sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108933128 (sox1)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108933128 (sox1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108933128
NCBI-ProteinID:
XP_018605476
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Position
1:complement(23045586..23047272)
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AA seq
343 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNSGQTGPNSGNKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAGAGSGGGVGGLGVGMSPAGVGQRLESPGGHGGTASAGYAHMNGWANGTYSG
QVAAAAAAAAMMQEAQLAYSQHPGGGAHHHHPHHHHPHNPQPMHRYDMTALQYSPISNSQ
SYMSASPSGYGGISYAQHQNSSVASSGTIGTLGSLVKSEPSVSPPVTTHSRAPCPGDLRE
MISMYLPTGEAGDPSVQSRLHTLPQHYQSPAAGVNGTVPLTHI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacctgcattccccaggaccccagactaacacgaat
tcgggtcaaacggggccgaacagcgggaacaaagctaaccaggatcgcgtaaagagaccg
atgaacgcgtttatggtttggtcccggggccagcggaggaagatggcccaggagaacccc
aaaatgcacaactccgaaatcagcaagaggctgggcgccgagtggaaggtcatgtccgag
gcggagaagagacccttcatcgacgaggcgaagcgattgcgggcgatgcacatgaaagag
cacccggattacaagtaccgacccaggaggaagaccaagaccctgctgaagaaggacaaa
tactccttagccgggggtcttcttgccggggccggtagtggtggcggagttgggggtctg
ggggtcggcatgagccccgcgggggtcggacagaggttggagagccccgggggtcacggc
ggcacggccagcgcgggctacgcgcacatgaacggctgggcgaacggcacctactcggga
caggtggccgcggcggctgcggctgccgcgatgatgcaggaggcgcagctcgcgtacagc
cagcacccgggcggcggcgcgcaccaccaccacccgcaccaccaccacccgcacaacccc
cagcccatgcaccgctacgacatgaccgccctgcagtacagtcccatctcgaactcgcag
agctacatgagcgcctctccctcgggctacgggggcatctcctacgctcagcaccagaac
tccagcgtggcttcttctggcaccatcggcaccttgggctcgctggtgaaatcggagcca
agtgtaagccctcctgttaccactcactccagagctccgtgtccgggggatctgagggag
atgataagcatgtatttacccacgggggaagcgggcgacccgtcagtgcagagtagactc
cacacactgccgcagcactaccagagtccggcggctggggtgaacggaacagttcctctg
acacacatctaa
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integrated database retrieval system
