KEGG   Scleropages formosus (Asian bonytongue): 108933153
Entry
108933153         CDS       T04919                                 
Name
(RefSeq) collagen alpha-1(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04382  Cornified envelope formation
sfm04510  Focal adhesion
sfm04512  ECM-receptor interaction
sfm04518  Integrin signaling
sfm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108933153
   04518 Integrin signaling
    108933153
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108933153
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108933153
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108933153
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfm04147]
    108933153
   00536 Glycosaminoglycan binding proteins [BR:sfm00536]
    108933153
Exosome [BR:sfm04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   108933153
Glycosaminoglycan binding proteins [BR:sfm00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108933153
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 108933153
NCBI-ProteinID: XP_018605505
LinkDB
Position
1:complement(24369630..24414538)
AA seq 1640 aa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NT seq 4923 nt   +upstreamnt  +downstreamnt
atggtgcccgtgaagagcttctggcttcttctctccatacttctctgcaagacagactgg
tccggggctgcgggctgctcaggatcatcgtgcggcagttgcgattgcagcggcgtgaag
gggtcaaagggtgaacgaggacttcccggcctgcagggcaacatgggatttcctggaatg
caagggcctgaaggaccgccaggacagattggaccaaagggtgaccgcggagaaccaggc
gcatctggacacaaaggaacaaggggtcctcctggtgctgcagggttcccaggaaatcca
ggacttccaggaatcccaggtcaagacggccccccaggaccaccgggcatcccaggctgc
aatgggacaaagggagaacatggattacctggaatctcgggagaacctggcttgcggggc
ccacctggtatccctggaattccaggaatgaagggtgatcctggtggtttaattggaggc
ttcatccctctgaagggtgagaaaggatcgcctggaaatccaggtctgttggggcaacct
gggatgccagggacctctggtccatttggaccaccagggccagcgggagtccaagggcct
ccaggaccgccgggtccaccaggagagccgtacaacgtgacgttcagtggggagaagggg
cagaagggtgagagaggagttacaggaccccccggacccccaggacagtttgatggcaca
gaaacaccggggccaatctacataagaccgggacccaagggtgacacaggtgaacgtggc
gagaaaggagagaagggctactgtttgccatatgcaaatggcgtcaaaggtgaacctggc
ccacaaggacccaggggcaaacctggtaaagatggagagaagggcagcaaaggggatcaa
ggttttcatggtgatcctggatatgacggacggccgggtgaaaaaggagaaaaaggtctc
cctggatatggtggtggtgctccaggtcctgcaggacctcctggacccccaggcttgaaa
ggagagcgaggtttccctggttttccaggagaccctggtcctccagggagacacattgaa
ggacctcctggagaaattggattccctggggagattggacagaagggtgacaagggtgct
gccggtttaccactacgtggcccaggaggtcaacctggacttcctggacaacctggccct
cctggacctccaggggacggagagtgtgatattcaacacggaccaccagggcccccaggt
ccaccaggtctccagggagaggtgggacaaaaaggggaccaaggagatgtttgtgtggat
tgtgtagcttttggacctcctggacctcctggccctccagggccatctggaaagcaaggt
tatcctggaacccccggatcaaaaggagagaggggccaatcggggcctcgtggtcctcaa
ggcaatcctggattagatggtgccccaggcttaatgggtcaaccaggtgcccaaggagaa
ccaggcgacatctatgtcgccccagggctgaaaggagacaagggcaggccaggcatccct
ggagatagaggactaccaggagtagatggagtcccggggcgacacggcttacccggtgtg
ccaggactcaaaggagaagcggcaacttttggtattaaaggagaaaaaggtgaagttgga
cgacctggttatagtggacccccaggagagagaggtcctccaggtgttccagggaatggt
cttcctggtgcacctggagaaaaaggcagtcgtggtgagccaggaagaccaggagtacca
ggaataataggtcccaaaggggaaccggggaaaggtgtcagtataccaggtccacaaggt
accccaggacccagaggagacacaggaaggcctgggatacagggtgaccgaggacctcag
ggtaccccaggctttcctggccttcaaggaaagaaaggtgagataggccacccaggcatc
ggactgcctggccttcctggaccgaaaggacactcgggaatcccaggggcacctggcctg
cctggtgagccaggtctgcctgggattgatggtgcatctggatatccaggtcgtcctggg
caaaagggtgaaccagggaggggtcttcctgggcctaagggctctatggggccaaagggg
gtaactggctttccaggagataaaggcaacaccggtcatcctggcatcccaggacaggag
gggctgacaggtcttcctggacctcagggaaatagaggtgatcctggaccccctgggtca
catggattaccaggcccaccaggcccaccaggactaggagcgcctggaccacaaggaccc
atgggacccccgggttttccaggacccttcggaccatctggagagaagggcgtgaagggg
gaccctggcttccctggcctggacatgcctggaccacagggagagaaaggtgacgcagga
ctccctggatttcctggagcaaaggggataaagggtcaaccaggccctgttggccaagat
ggggtgccaggccagaaaggttccaaaggagagataggattcattggaacaccaggattt
cctggacctccgggctccactggagatcctggcgttcctggaccaagaggtgaccctggt
ttgattggaatacggggtgaaactggtcatcaggggcccaaaggagatcgaggagatcct
ggcctacagggacctgcaggaaacatgactgatgcagacatggaacacctgaaaggcgat
aaaggtgacagtggtgacagaggtgatcctggactaacgggagagaaaggatttcctggg
gaatctggaaaacctggaatgccaggaaaggatggaatgccaggtttacctggtcaacaa
ggtgagaaaggtgacataggagaccctggagaacctggaagaactggatatcctggacag
aaaggcatcataggagaaatgggaattccaggttctgttggaccaaagggctctaaaggg
gtaggtggtaccccaggtcaccctggttttccagggtccaccggggtgaagggggagaag
ggagtccctggcagtccaggtgttgggatacagggacctccaggagagaagggtaatatc
ggtctaccaggcatcactgggacccaaggagagaaaggccaaaaaggtgtaatgggtgtc
ccaggaaagccaggcacatttggacttaagggcgatagaggctatgatggttttcaaggt
agccctggacaaccaggtggcaaaggagaccctgggctgcatgggctgccgggagatccg
ggtttaccaggcagaccaggtgaaccaggtctacagggcccacctggtcctcaaggggag
aagggtcaggctggtatagatggaataccagggtcctcaggggaacggggtgaaccaggt
gcacctggaagaggcttccctggatcacccggtcagcctggcagtaaaggtgacaaaggc
agtgatgggcttccaggggccccaggcattcctggtgttcctggattgaaaggtgataag
ggcttggcgggagatcagggtcgccagggtccaccaggggagaggggcctaccagggcag
tcaatggaagggcccaagggtgacagaggagtcccaggaggggcaggagaaagaggtgca
cccggagccccaggcctacctggagttcctggaagcaccggagccaaaggtgaaaaagga
ggcgagggcttccaggggcccacagggcaaccggggtacaagggggaaaaaggacctcct
ggacttcctggaatacctggcctgccggggtacaatggaggaaagggggagacgggattg
caaggtcctcctggattcccaggaatgaagggtgactctggttttatgggaaacaaagga
gagcaaggagacagaggtttccctggaatcaaaggtaatgatgggcctccaggaccacct
ggtcccacagtgttaattaagggggatatcggcttcccagggcatcaagggccacagggt
ccccaaggacttccgggactttcgggagttaagggcctgcaaggtgtgaccggaccaaag
ggcataaaaggagaagaagggcagcctggatatgatggccgacccgggatgaagggcgag
ccagggcccattgggccttctggtcccaggggctatcccggccccccagggccagatggt
cagcctgggcaggtggggcccccaggaccctcatccatggatcatggcttcctggtgaca
cggcatagccagtcagtggaagtgcccttctgcccagagggaacgaggttgatctatgat
gggtattccctcttgtacgtgcagggcaacgagcgttcacatggacaggacttgggaaca
gcagggagctgcctgagaaagttcagccccatgcctttcctgttctgcaacatcaacaac
gtgtgcaactttgcatcaaggaatgactactcctactggctgacttctcctgaacccatg
cctatgagcatggcacccatcactggcgaaagcattaagcccttcattagcaggtgtgct
gtatgtgaggcccctgccatggtgattgcagtacacagccagtctattcgtatccctccc
tgccctcagggatgggactccctgtggattggctactcctttgtcatgcacaccagtgca
ggagcagagggttctggtcaggcactggcctctcctggctcgtgtctggaggaattccgc
agcgcccccttcatcgagtgccacggacgcggtacctgcaactactacgccaactcctac
agcttctggctggccaccatcgaggaccatgacatgtttacgaaacctgtccccgcaacg
ctaaaagcaggaagcttacgaacccacatcagcaggtgccaggtctgcatgaagaggaca
taa

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