Scleropages formosus (Asian bonytongue): 108933239
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Entry
108933239 CDS
T04919
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
sfm03083
Polycomb repressive complex
sfm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108933239
03083 Polycomb repressive complex
108933239
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108933239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108933239
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108933239
Histone modification proteins
HAT complexes
HATB complex
108933239
HDAC complexes
Sin3A-HDAC complex
108933239
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108933239
PRC2.2
108933239
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108933239
Heterochromatin formation proteins
Other heterochromatin formation proteins
108933239
Chromatin remodeling factors
NuRD complex
108933239
NuRF complex
108933239
NuRF complex (fruit fly)
108933239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108933239
NCBI-ProteinID:
XP_018605685
UniProt:
A0A8C9R5R4
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All DBs
Position
1:complement(20900009..20906706)
Genome browser
AA seq
465 aa
AA seq
DB search
MADKEEELRGARCPPNSLPTNPPHPRRGQCALLTCDAPGCLSRAVYDDAVEERVINEEYK
IWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYAVHRLVLGTHTSDEQNHLVIA
SVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIA
TKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHT
ICLWDISGVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN
TAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF
QVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFS
WNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASELEGQGS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaagaggagctgcggggcgcgcggtgcccaccgaacagcctgccaacc
aaccccccccatccccgccggggtcaatgcgcgctcttgacttgtgacgcccctggctgt
ctgtctcgcgcagtgtacgacgacgccgtggaggagcgagtcatcaacgaggagtacaag
atctggaagaagaacacgccgttcctgtacgacctggtcatgacgcacgcgctcgagtgg
ccgagcctcacggtgcagtggctgcccgacgtgaacagaccagaaggcaaagactacgcc
gtgcacagactggtgctgggaacacacacctcagatgagcagaaccatctggtcatcgcc
agcgttcagatccccaatgatgacgcgcagtttgatgcctcgcactacgacagcgagaag
ggagcagaatttggcggcttcggctcagtcagcgggaagattgaaattgagatcaagatc
aaccacgaaggtgaagtgaaccgggcccggtacatgccgcaaaacccgtgcatcatcgcc
acgaagactcccacctccgacgtgctggtgttcgactacaccaagcacccctcgaagcca
gaccccagcggagagtgcagtcctgacctgcgtctgcggggtcaccagaaggagggttac
ggactgtcctggaaccccaacctcagcggcaacctgttgagcgcctccgatgaccatacc
atctgtctgtgggacatcagtggtgtcccaaaggagggcaagatagtggacgccaagacc
atcttcactggccacacagctgtagtggaggacgtctcttggcacctcctgcacgagtcg
ctctttggctctgtcgccgacgaccagaagctcatgatctgggacacaaggtccaacaac
acggcaaagcccagccactcggtggacgcccacaccgccgaggtcaactgcctgtccttc
aacccctacagcgagttcatcctggccacaggctccgcagacaagacagtggccctctgg
gatctcaggaacctcaagctgaagctgcactcgtttgagtctcataaggacgagatcttc
caggtccagtggtcgccccataatgagaccatcctggcctccagcggcacagacaggagg
ctcaacgtctgggacctcagtaaaataggagaggagcagtcggctgaggatgcagaggat
ggtcctccagagctgctgtttatccacggcgggcacacggcgaagatctccgacttctct
tggaacccgaacgaaccctgggtgatctgttccgtgtcggaggacaacatcatgcaagtg
tggcagatggcggaaaacatctacaacgacgaggagccagacacaccggcgtcggagctc
gagggccagggctcctaa
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