Scleropages formosus (Asian bonytongue): 108933448
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Entry
108933448 CDS
T04919
Name
(RefSeq) autophagy-related protein 16-2-like isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108933448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108933448
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108933448
Membrane trafficking [BR:
sfm04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108933448
Others
Specific organelles associated proteins
Auto phagosome
108933448
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108933448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ATG16
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_IFT122_1st
Uso1_p115_C
PALB2_WD40
WD_LRWD1
Cytochrom_D1
DUF1664
fn3_2
YabA
TMF_DNA_bd
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
108933448
NCBI-ProteinID:
XP_029111443
LinkDB
All DBs
Position
10:8207076..8228269
Genome browser
AA seq
618 aa
AA seq
DB search
MAAREQLDSAGAKGSPADAWKHHIIRQLKHRDRAQKTLYQDLIRSYIKLLEKSNQKVFIA
QGLLGSVARHQLSTSKDSLTSLVSQHQDKVKNLNKTSGELAYKVLELQQEIRIKSSVLEE
QHARMSEIRSQLAAAEAEVSGLQAQVEEVRQGNWHLKREYDSLLERHHDMDEKFREEKVR
GSELVEDMIRWKQLAAVKMNTRNEKRVRAREANIQKELEMAAKEKVDIDIGSCNMPSVNL
PSPKPEVDEKSEKRQTRMFRSASAAPPRIFDSFKDFFDRKRRGNSLCSLEEDLYAPLRVC
LAARIPCRAIHVLDAHELSINAVRFSSISNLLATGGTDRVIKLWDISAGMLQNRGILDGS
NEGITSIEFDPTGTKLLAASYDKSALFWRLDDSRPKFTLTGHSRKVTAAKFKCSLRQVVT
GSADRTVKVWDLHRAACIQTIEVFSYCSDVVCSEYFIISGHYDRKIRFWDSRAASCTQEI
PLQGRVTSMDLCPDHRQLLSCSRDESLQVVDLRMSNSRRSFRADGFKCGCDTTKAIFSPD
GSYLAAGSADGAVYIWNVNTGHLETTLPDKHRWSSFIIQPHGVDPFVDLRRDPLLKMCRR
HRRRGPTEITHPEGLRAS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgtgagcagcttgactcggccggtgcgaaagggagtccggcggatgcatgg
aagcaccacatcatccggcagctgaagcaccgggacagggcgcagaagaccctctaccag
gacctcatacggtcgtacattaagctgttggagaagtccaaccaaaaggtgtttatcgcc
caaggtctgctgggctcagttgcaaggcaccagttgagcacctctaaagattccttgaca
tctctggtttctcagcatcaagacaaagtgaagaatctgaacaaaacaagtggagagttg
gcttacaaggtgctagagcttcagcaggagataagaatcaaaagctctgttcttgaagag
cagcatgccagaatgagtgagataaggagccagctggcagcagcagaggccgaggtgagc
ggccttcaggcccaagtagaggaggtgcgacaggggaactggcacctgaagcgtgagtac
gactccctgctggagcggcaccatgacatggatgagaaatttcgggaggagaaagtgcgg
ggctctgagctggtggaggacatgatccggtggaaacagctggcagccgtcaagatgaac
accaggaatgagaagagggtgcgagcaagagaagctaacattcagaaggagctggagatg
gcagcaaaggagaaagtggacattgacatcggttcttgtaatatgccttcagtcaacctg
ccgtctcccaagcctgaggtggacgagaaatctgagaaacgccaaacccgaatgttcagg
tcagcctcagcagctccacccaggatttttgattcttttaaagatttctttgacaggaag
aggcgtggtaactcattgtgcagcctggaagaggacctctatgcacctcttagggtctgc
ctggctgctagaatcccgtgtagagccattcacgtcctggatgcacatgaactgagtatt
aatgcagtgcgattcagctccatttccaatttgctggctaccgggggcacagacagagtt
atcaaactttgggatatcagtgcaggcatgttgcagaacaggggcatattagatggtagt
aatgaggggataaccagtattgaatttgacccaactggcaccaagcttcttgctgcgtca
tatgacaaatctgctcttttttggagactggatgacagtagacccaagttcaccctgact
ggccattcgcgaaaagtgacagcggccaagtttaagtgcagcctgcgccaggtggtcacc
ggaagtgcggacaggacggtcaaagtctgggacctacatcgggcagcttgcatacagact
attgaagtattctcttactgcagtgatgttgtgtgctccgaatacttcatcatcagcgga
cactatgacagaaaaatccgcttctgggacagccgggcagccagctgcacgcaggagatc
cccctgcagggcagggtgacatcgatggacctctgccccgaccacagacagctgctaagc
tgttctagggatgagagcctgcaggtggtggacctgaggatgagcaattccagaagatct
ttcagggctgatggatttaaatgtgggtgtgataccacaaaggccatattcagccccgat
ggcagttatttggcggctggatcagcggacggagcggtctatatctggaacgtgaacacg
ggccaccttgagacaactctgcccgacaagcacaggtggtcgtctttcatcatccagcct
cacggggtagatccgtttgtggacctgcgaagagaccccctactgaaaatgtgtcgtcgt
caccgccgtcgcggtccaacggagattactcacccagaagggctgcgggccagctag
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