Scleropages formosus (Asian bonytongue): 108933662
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Entry
108933662 CDS
T04919
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
sfm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108933662 (poll)
03450 Non-homologous end-joining
108933662 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108933662 (poll)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108933662 (poll)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108933662 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108933662 (poll)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
NTP_transf_2
BRCT_2
LIG3_BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
108933662
NCBI-ProteinID:
XP_018606371
UniProt:
A0A8C9QYK7
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Position
16:22216588..22222300
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AA seq
584 aa
AA seq
DB search
MNPEVFRFLNLCFFFFLNSRACVVLLLSKKEMALPGIVKAFPKVKRQSGDELEGKEGPPG
KKKSEDAVTGNFFKGVSVHILPAGIGNARCKIFEKQVSQNGGLVEPTFCPSVTHVILDDS
MDFDRALRLLKVERLPLSVQLVKSSWLSLCITEKTLLSTSNYSLPIPSSQVESFEGEAKE
DSCSEVPSCSLSKGIPPPPEAKEDDVLQQISGEREEDDVSQNDLDALIKGLNPKSEILPL
EQKPTLEKWVCAQSSLSKTENYNKHITDKLELLAKAYTHQGDKWRSLSYSKAVSALKSYH
KPITSFEEACKIQGIGKRMAEKIMEIMESGHLRKLDYIGEDVPVLELFTNIWGAGAKTAK
LWYQQGFRTLDDIRTKAQLTSQQKIGLKHYDDFLDRMPREEAAAIEKTVRDAAHSLNPGL
LAIACGSYRRGKATCGDVDVLITHPDGKSHRNVFSKILLNLHQHGFLTDDLVSNEENGEQ
KKYLGVCRLPGPGQRHRRLDIIVVPYNEFACALLYFTGSAYFNRSMRALAKTKKMSLSEH
SLNKDVMRQGSLKVSSGIPLSTPTENDVFTYLGIPYREPHERDW
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggaagttttccgttttttaaatctctgtttttttttttttttaaactcacgt
gcctgtgttgtgttgctgctctccaaaaaagagatggcactgcctggcattgtaaaagcc
ttcccaaaagtgaagagacagagtggagatgaacttgaagggaaagaagggcctccaggc
aaaaagaaaagcgaggatgcagtaacaggaaatttctttaaaggagtgtcagtacacata
ctcccagctggtattgggaatgcccgctgtaaaatatttgagaagcaggtctcccaaaat
ggtggactggttgagcctaccttctgtcccagtgtcactcatgtcattctggatgattcc
atggactttgatcgtgccttgcgcctgctgaaggtggagagacttcctttgtcagtgcag
ctggtaaagagttcctggcttagtctgtgcattacagagaagacattgctcagcacttca
aactacagcctccccatacctagcagtcaagtggaaagctttgaaggagaagcaaaagaa
gattcatgtagtgaagtcccaagctgctcactctcaaaaggaattccaccaccgcctgaa
gcaaaagaggatgatgtattgcaacaaatatcaggtgagagagaggaagatgatgtctca
caaaatgatcttgatgccctcatcaaagggctcaatcccaagagtgagatattgcccttg
gaacagaaacccactctagagaagtgggtttgtgctcagtcttctctctctaaaactgaa
aattataacaagcacatcacagacaagctggagctcttggccaaggcttacacacatcaa
ggggataagtggagatcacttagttactcaaaagctgtcagtgcacttaagagctaccac
aaacccattacttcatttgaggaggcttgtaagatccaaggtattgggaaacgaatggca
gaaaagatcatggaaatcatggagagtggccaccttcgcaagttggactacataggagag
gatgttccagtactagaactcttcaccaatatctggggtgctggtgccaagactgcaaag
ttgtggtatcaacagggctttcgcactttggatgatatccgcactaaggctcagctgacc
tcccagcaaaaaataggactgaagcattatgacgattttctagaccggatgccaagagaa
gaagctgctgctattgaaaaaacagtaagggatgctgcccactccctgaacccaggtctg
ctggccattgcatgtggctcgtaccgtagagggaaggcaacctgcggagatgtggatgtt
ctcattacacacccagatggaaaatcccacaggaatgtcttcagtaaaatactactaaac
ctgcatcagcatggctttctgacagatgacctcgtcagcaacgaggagaatggagaacaa
aagaagtatctgggtgtgtgccgtctaccgggccccgggcagcggcaccggagactggac
atcattgtagtgccatacaatgagtttgcctgcgcgctgctgtacttcactggatctgcc
tatttcaaccgttccatgagggccctggccaaaaccaagaaaatgagcctctcggaacac
tctctcaacaaagatgtgatgcgccagggcagcctgaaggtttcttctggaatcccactt
tccacaccaacagagaacgatgtctttacttaccttggtataccctacagggagccccat
gaaagggactggtga
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