Scleropages formosus (Asian bonytongue): 108933725
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Entry
108933725 CDS
T04919
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03015
mRNA surveillance pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108933725
09122 Translation
03013 Nucleocytoplasmic transport
108933725
03015 mRNA surveillance pathway
108933725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108933725
03041 Spliceosome [BR:
sfm03041
]
108933725
03009 Ribosome biogenesis [BR:
sfm03009
]
108933725
03012 Translation factors [BR:
sfm03012
]
108933725
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108933725
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108933725
mRNA cycle factors
Stress granule specific factors
108933725
Spliceosome [BR:
sfm03041
]
Complex C
Other components
EJC/TREX
108933725
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
90S particles
Helicases
108933725
Translation factors [BR:
sfm03012
]
Eukaryotic type
Initiation factors
eIF-4
108933725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108933725
NCBI-ProteinID:
XP_018606482
UniProt:
A0A8C9V847
LinkDB
All DBs
Position
16:complement(16666410..16671255)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAATVPVKKRLLKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDFMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERDSIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccacggtaccggtgaaaaagcgtctcctgaaggatgaagatatgaccaaa
gtagagtttgagaccagcgaggaggtggacgttacccctacgttcgacacaatgggcctg
cgagaggacctgctccgcgggatctacgcgtacggctttgagaaaccgtctgcaatccag
cagagagccattaaacagatcatcaagggcagggatgtgatcgcacagtctcagtctggc
acagggaagactgccaccttctgtatctcagtgctccagtgcttggatatccaggttcga
gaaacccaagctcttattttggcaccaaccagagaattggctggtcaaatccagaaggta
ctcctggctttgggtgacttcatgaatgtccagtgccattcctgcattggagggacaaat
gtaggagaagatatcaggaagctggattatggtcagcatgtcgtggctggtactccaggt
cgtgtgtttgacatgatccgtagacgcagtttgaggacccgggctatcaagatgcttgtt
ctggatgaggcggatgaaatgttgaacaaaggtttcaaggagcagatctacgatgtgtac
aggtacctgcctcctgctacacaggtggttctcatcagcgctaccctgccccacgagatc
ctggagatgaccaacaagttcatgacagaccccatccgcatcctggtgaagcgcgatgag
ttgacgcttgagggcatcaagcagttctttgtggctgtggagagggaggaatggaagttt
gacacactgtgcgacctgtacgacacgctcaccatcacacaggccgtcatcttctgcaac
accaagaggaaggtggactggctgacggagaaaatgagggaagccaacttcactgtgtcc
tccatgcatggagacatgccccagaaggagagggattccatcatgaaggaattcagatct
ggagccagccgtgtgctcatctccacagacgtgtgggccagaggcctggatgtcccacag
gtgtccctcatcatcaactacgacctgcccaataaccgcgagttgtacattcacagaatt
ggccgatcaggtcgctatggacgcaagggtgttgccatcaactttgtgaagaatgatgac
attcgcatccttcgtgacattgaacagtactactccacacaaatagatgaaatgccaatg
aatgttgctgacctgatctga
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