Scleropages formosus (Asian bonytongue): 108933994
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Entry
108933994 CDS
T04919
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108933994 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108933994 (edc4)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108933994 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
108933994 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_HPS5
CelTOS
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Pdc1_Ge1
Uteroglobin
Spectrin_Dys-1
Motif
Other DBs
NCBI-GeneID:
108933994
NCBI-ProteinID:
XP_018606971
UniProt:
A0A8C9RDW9
LinkDB
All DBs
Position
1:13341453..13358724
Genome browser
AA seq
1387 aa
AA seq
DB search
MASNANMDMEDATQQLRDMLKLERPTSSDISSADNQKKSSFNGELNGLFGVGLLSTGDRA
PCADSVNGQDSQIIHLSGDDSSTCVAISSSHVEIVASQESSISSKARGSNKVTIKPVAKY
DWEHKYYYGSLIAVSNSYLAYAIRGAGSYMIRVLCQGTSERTLLKGFTGAVADLAFAHLD
SSQLACLDEAGNLFIWQLGCHSGKIQEEILVHVQRPDDTSPSACRRLVWCPFIPEDNDEG
PEDSCQTLALLHEDRAEVWDLDIIRSNHRCWPVAANDVTEGFITVKGHNGRISEGALSPD
GTVLATASHDGFLKFWQIYIEGQDQPRCLHDWKPHDGRPLSCLLFCDNHKKQDPDVPFWR
FLVTGADQNRELKMWCTVSWTCLQTIRFSPDPLNSAVLPSMKAVLDLSAEYLILSDVQRK
VLYVMELQQNQERGQAGFTAVSEFLLTHPVLSFGLQDVSRSRLRHTEVLPPEEESESMTV
EGNQGCPVESKEGIQIKLYCVHTKCLQDVQIWFQPLVRPSSSLFPPTSGSQDHFGPNVDQ
ESGQSELRVLPAMPAPTDFLPPADSVKPTLMTPDAFMTPTASIPASPGSNVSSLTVVTAM
SCTSAGGRASEELTQSSKGSLESSALGLGSASGSASGSPSGSRSGSASSSPCSSAILIPG
LGDQLCPSSSQATVSLGTQNPPLSLDLQAIEPLRVPQASPTRERSPDVISSASTAMSQDI
PEIASETLQRGLSVAVAGGVVSKGIEPLSSSLHTDSMASAASALHLLSPQNHSGSDHGRA
SQELGGTVGGAPTDGERLNSTPSLLETALSQEGAAACADSTVSWPAAPDITRETRNSLAD
CSRDDVKTSAFRRHSYTLVRNSSPDASAEQSDHEAEVLNLASSSGNCSSRSSHKLPVKDW
RVSPRSSPKLKRKSKKDDGESMQPRQADLQVSLETQEELVQLLRSQQRELSELRHNQLEL
LQRLTGHIDAVQSSVLALVEQAVVQQQEQNQHCMERVLAEGQRRSQELQEELTQQLVHTL
STAVSNRLDKVLRDEMKKTIPQAISKSLEPVTGQLSSTIATKLTAVEAALKENVTKVVKS
KNTTDAIGRAAAEAMQGPIQSAYKEAFQSTVLPVFEKGCQSMFQQINDSFKQGTHEYIQQ
LENHLKNRKQREHDARDPLVDHLQQVVDSLQNTTDQLAANVTASVRSEVQHQLHVIVGNL
QDSILTQVQRIIKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPIPTAHLDYQSQQASVLQL
LQQGQINQAFQQALSAADLNLVLYVCETIDSQQVFGQHPCPLIQPVLLSLIQQLSTNLAT
RTELKISYLEDAVMNLDHSDPVTRDHMSSVLTQLRQKLFQFLQMEPHGPLSKRARRLMMM
LQGLVNH
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacgccaacatggacatggaagacgcaacgcagcagctccgcgacatgcta
aagctggagcggcccaccagcagtgacatttcctctgctgacaaccagaagaagagctcc
ttcaatggggaactcaacgggctttttggagttggactcctaagcactggggacagagca
ccctgtgcagacagtgtgaatggccaggactcacagatcatccacctttccggagatgac
agctcgacatgcgttgccatctcctccagccatgtggagattgtggcgagccaggagtcc
agcattagcagcaaggcccgtggcagcaacaaggtcaccatcaagcctgtggccaagtat
gactgggagcacaagtactactatggcagcctgatagcggtttccaactcctacctggca
tatgccatcagaggtgcaggaagctacatgatccgcgtgctgtgccagggcacatcggag
cgaactctgctcaagggcttcactggtgctgttgctgacttggccttcgcccacttggac
tcatcacagctggcctgcctggatgaggcgggaaacctgttcatctggcaactcggctgc
cattcaggcaagatccaagaggagattctggtgcatgttcagcgaccggacgacacatca
cctagcgcctgcagaaggcttgtttggtgccccttcattcctgaagacaatgacgaaggc
cctgaggacagctgccagaccctggctctgcttcatgaggaccgagctgaggtttgggat
ctggacatcatcagatcgaaccatcgctgctggccggtagctgccaatgatgtgacagag
ggcttcatcactgtcaagggccataatgggcgcatcagtgaaggcgcgctctctccagat
ggcacagtcctcgccacggccagccacgacgggttccttaagttctggcagatctatatt
gaagggcaggaccagcccaggtgcctacatgattggaaaccacatgatgggcgcccgctg
tcctgtctgcttttctgtgacaatcacaagaaacaggaccctgatgtacctttctggcgt
ttcctggtcactggcgctgaccagaaccgtgaactgaagatgtggtgtacggtatcgtgg
acttgcttgcagacgatcaggttctcgccggacccactcaattcggctgtgcttccaagc
atgaaagccgtcctggacttgtcagcggagtacttgatcctgagcgatgtgcagaggaag
gttctgtatgtgatggagctgcagcagaaccaggagaggggccaggctggtttcaccgct
gtctcagagttcctgctcacacaccctgtgctcagctttggcctgcaggatgtgagccgc
agccggctgcgtcacactgaggtgcttccccccgaggaggagagtgagagcatgactgtg
gaaggcaatcagggttgtccagtggagtccaaggagggcatccagatcaaactctactgt
gtccacaccaagtgccttcaggacgtgcagatctggtttcagcctcttgtgcgtcccagc
agctcgcttttcccacccacctcaggctctcaggaccactttggtcccaacgtggaccag
gaatcgggacaaagcgagctccgtgtgctgcctgccatgccagccccgactgactttctg
ccccctgccgacagtgtgaagcctactctgatgacgcccgatgccttcatgacacccact
gcttcgatccctgcctcccctggcagcaatgtcagcagtctgactgtggtgactgctatg
agttgcacctctgctggaggcagggctagtgaggagctcacacaaagctcgaagggatct
cttgagagcagcgccctgggtctcggctctgcctctggctctgcgtctgggtctccttct
ggttccaggtctggctcagccagtagcagcccttgttccagtgccatccttatcccaggg
ctaggggaccagttgtgccctagcagcagccaggcaactgtttctttggggacccagaac
ccgcctctctcactggatctgcaggccatagagccgctgcgtgtccctcaggcatccccg
acacgggagcgttctccggatgtcatctcctctgcttccacagccatgtcccaagacatc
ccagagatcgcctcggaaacactgcagcgtggactgagcgtggctgtggctggaggtgtc
gtttcaaaggggatcgagcccctcagctcctccctccacactgacagcatggcctcagca
gcctctgcgttgcatttgctgtccccacaaaaccacagtgggtcagaccatggccgtgcc
tcccaggaattgggtggcactgtaggtggagctccaactgatggggagaggcttaactcc
accccttctcttttggagacagccctgtcgcaggagggtgcagctgcttgtgcagacagt
accgtgagctggcctgctgctccagacatcacaagggagacacgcaacagcctggcagac
tgttctcgtgacgacgtgaagacgtctgcctttcgcaggcactcgtacactctagtgcgg
aacagcagtccggatgccagtgccgagcagagtgaccatgaggccgaggtgctgaatctg
gcgtcatcttcagggaactgttcttcccgctcttcccacaaacttccagtgaaggactgg
agggtgtcacccaggtcatccccaaaactgaagaggaagagcaaaaaagatgatggtgag
tccatgcagcccagacaagctgatcttcaggtgagcctggagacacaagaggagcttgtg
cagcttcttcgtagccagcagagggagctgtcggagctgcggcacaaccagctggagctg
ctgcaacggctgaccggccatatagatgctgtgcagagctctgttttggcccttgttgag
caggctgtggtgcagcagcaggagcagaaccagcattgcatggagcgtgtgttggcagag
ggacagcgaagaagccaagagctgcaggaggagcttactcaacagctagtccacaccctg
agcacagccgtctccaaccgtttggacaaggtactccgcgatgagatgaagaagacgatc
ccgcaggccatctccaagagcctggaacctgttacagggcagttgagcagcacgattgcc
accaagctaactgctgtggaggcagcgctgaaggagaatgtcaccaaagtcgtcaagtca
aagaatactacagatgccattggccgagctgcagctgaggccatgcagggccccattcag
tcggcctacaaggaggccttccaaagcaccgtcttgccagtgtttgagaaaggctgtcag
tccatgttccagcagatcaacgacagcttcaaacagggaacccatgaatacatccagcag
ctggagaatcacctgaagaaccgaaaacaacgtgagcatgatgcccgggaccctcttgtt
gatcacctccagcaggtggtcgactcactgcagaatactacagaccagctggctgccaat
gtgactgccagcgtgcgctcagaggtccaacaccagctccatgtgattgtggggaacctg
caggattccatcctgacgcaggtgcagcgcatcatcaagggtgaggtaagcctggctatg
aaggagcagcaggctgtggtcacttccagcatcatgcaggccatgcgctcggccgcaggc
acacccatccccacggcacatctggactatcagtcgcagcaggccagtgtgctgcagctt
ctgcagcaggggcagatcaaccaggccttccagcaggccctgtcagctgcagatttgaac
ctggtgctgtatgtgtgtgagaccattgactcccagcaggtgtttggtcagcacccctgt
cctctcatccaaccggtcttgctgtcgctgattcagcagctgtccacgaacctggccact
cgcaccgagctgaagatcagttacctcgaagatgcagtgatgaacctggaccacagtgac
cctgtgacacgggaccatatgagctcagtcctcactcagctaagacagaagctcttccag
ttcctgcagatggagccacacgggccactcagcaagagagcacggcggctcatgatgatg
ctgcagggtctggtcaaccactag
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integrated database retrieval system
