Scleropages formosus (Asian bonytongue): 108934078
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Entry
108934078 CDS
T04919
Name
(RefSeq) ras-related protein Rab-39B isoform X1
KO
K07925
Ras-related protein Rab-39B
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108934078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108934078
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sfm04031
]
108934078
Membrane trafficking [BR:
sfm04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
108934078
GTP-binding proteins [BR:
sfm04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
108934078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
GTP_EFTU
TniB
AAA_22
Motif
Other DBs
NCBI-GeneID:
108934078
NCBI-ProteinID:
XP_018607099
UniProt:
A0A8C9WL25
LinkDB
All DBs
Position
4:38958326..38963768
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AA seq
227 aa
AA seq
DB search
MKSCDAVAKPTQRDMEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGHFAQVSDPTVGVDFF
SRLVEVEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVTNWLEE
ARSHVQPHSIIFLLVGHKCDLEAQRQVSQQEAEKLAGACGMRYVETSARDAINVERAFAD
LTRDIFQLVKSGDIAIQDGWEGVKSGFVPNMVHSSEEVTKSDRQCFC
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgtgtgacgctgtagccaaaccgactcagagagacatggaagcaatatggctg
tatcagttccgactgattgttattggcgattctacggtgggaaagtcgtgtctgattcgg
aggttcaccgagggacactttgcccaagtgtctgatcctacagttggggtggatttcttc
tcacgtctggtcgaggtagagccgggaaaacggattaaacttcagatctgggacactgcg
ggacaagaaagattcaggtctataacaagggcctattaccgtaactcagtgggtgggctc
ttgctctttgacatcaccaaccgacgatccttccagaatgtgaccaattggctggaggag
gcacgcagccacgttcagccacacagcatcatcttcctcttggtggggcataagtgtgac
ctggaggcacagaggcaggtcagccagcaggaagctgagaagctggctggtgcctgtggc
atgcgctacgtggagacatcagcccgcgatgccataaacgtggagagggcttttgcggac
ctgacacgggacatctttcagttggtcaagagcggtgacatcgctatccaggatggctgg
gagggagtaaaaagtgggtttgtgcccaacatggtacactcctctgaggaggtcaccaag
agtgaccgccaatgcttctgctga
DBGET
integrated database retrieval system
