Scleropages formosus (Asian bonytongue): 108934241
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Entry
108934241 CDS
T04919
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108934241
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108934241
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108934241
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108934241
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Protocadherins
108934241
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108934241
NCBI-ProteinID:
XP_018607321
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Position
4:28612008..28640762
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AA seq
1180 aa
AA seq
DB search
MRLPWKTLLFWVLLLIVHHRTAGSVLYRAQEEQPPNTLIGSLAADQGLPDSGHLYKLEVG
SPYLRVDGKTGDIFTTEVPIDRENIKDCRNLYRGDPCFLEFEVSITDLNQNLSPRLIEGR
IEVQDINDNTPQFPSPILTLSIPENTHQGALFPIPLANDRDSGRNGVVDYALTAGPDAAG
LFSLQVAEDRGEKLPQLIVLGNLDREQRDSYDLSIKVVDGGNPPRYSSALLRIVVLDAND
NAPRFEKPMYEAELYENSPVGHSVLQVKAVDSDIGLNGEIEYSLHQVTDPVQKLLRIDHS
TGIIFVKGLVDREEIGALKFYVVARDKGSTPKSSKVYLTINVKDQNDNAPVVEIRGIGLV
THQDGIANISEDMPIGTAVALVQVSDQDEGENAVVTCVVAGDVPFQLRPASDSPTDNKRK
YFLQTTTLLDYERVKDYQVEVVAVDSGNPALSSTNSLKVQVQDVNDNSPVFSPTLLEVDF
WEENQLGDKVVDVVATDADSGTNSELTYSIITDSSTKGLFEINPNTGEVRARSQLDREHR
DRYEFHVAASDKGIPSHRGTAVVVVRVLDRNDNDPKFMLNGYSFSVLENMPKLSPVGMVT
VIDADKGQNAQVHLSVEPDNGKFVIQNGTGTILSSHSLDREKENSYTFRLKAVDGGDPPR
SSYVGVTINVLDENDNAPYVTKPSNSSYKCLSSLTNPESRVVRVEAEDIDTGPNAELLFS
ISSGNPHNLFRISPTDGEITLAKELAPRHNGLHRLVVKVSDKGKPPRHTTALIHIYVNET
FNNVTLLESLVGHSLNTPLDLDIAGDPEYNNSAHRSNIMYGSLAGVTAVLLVIVVVVVIR
HQWQKEAKGGYQAGKKETKDLYTPKQGHKGSKAKKWKKGKAPKPTKPLEEDEEVEEANLQ
KSLNFNHDRLNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASSKHQVVQD
LPVANSFVGAGDDNSTGSDQYSDYSYKANPAKYSLKQLPHRRVTFSTTNQTQDQHDSSQH
SYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGELEHPENDIRSLPDVAM
TGNCTQECTEFGHSDTCWMPGQPSPVRKTRNTPKLSTFLPYQEKGNVDRLGPGGSRLPDE
RCAKVASVRLLPSHSAYSCSSHEPGQAPAIEETSKKEIYL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttccctggaaaacactgctattctgggttctgctgctgattgtccaccacagg
actgcagggagcgtcctctacagggcacaagaggaacagccacctaatactcttattggc
agcctagctgctgaccagggcttacctgactctggtcacttatacaaattagaggtggga
agcccctacttacgggtggatggtaagacaggggatatcttcactacagaagtccccatc
gatagggagaacataaaagattgtcgaaatctgtacaggggagatccctgcttcttggag
tttgaggtgtctataacagacttaaaccaaaatctgagccctcgtctgattgaagggcga
attgaggtccaggacattaatgacaacacaccacagtttccttcgcccattctcaccctt
tccattccggagaacacccaccaaggagcactatttcctatccccctagccaatgacaga
gattcggggaggaatggcgtggtagattatgccctaactgcaggcccggatgcagctggg
ctttttagcttgcaagtagctgaagatcgaggtgagaagcttcctcagctgattgttttg
ggtaacttagaccgtgaacagagggactcgtatgatctgagcatcaaagtggtggacggt
gggaaccctccacgttacagcagtgccttattaaggattgttgttctggatgccaatgat
aatgcaccccgatttgagaagccaatgtacgaggctgaactgtatgagaacagcccagtg
ggacactctgtgctccaggtgaaagctgttgactctgacattggcctgaatggggagatt
gagtattctttgcatcaagttacagatccagtgcaaaagttgctgagaattgaccactct
actggcattatctttgtcaaagggcttgttgaccgggaggaaattggggctttgaagttt
tacgtggttgcacgggacaaaggttcaacccctaaaagttccaaggtctacttaaccatc
aatgtgaaagaccaaaatgacaatgcccctgttgttgagatccgaggaattgggttggta
actcaccaggatggaatagcaaacatttcagaggacatgcccattgggacagcagtggca
ctagtgcaggtgtcagaccaagatgagggagagaatgctgtggttacgtgtgtagtggct
ggagatgttccgttccagcttcggccagccagtgattccccaactgacaacaaaaggaag
tacttcctgcagacaacgactcttctggactatgagcgagtcaaggactatcaagttgaa
gttgtggctgttgattctggcaacccagcactctccagcacaaactctttaaaagttcaa
gtccaagatgtcaacgacaactcccctgttttctctcctacattgctggaggtggatttt
tgggaagagaaccagcttggagacaaggttgtagacgtggtagccacagatgctgacagt
ggcacaaactcagagctcacctacagcataattacagactcttctacaaaaggtcttttc
gagatcaaccccaacacaggggaggtgcgggcacggagtcagcttgaccgagaacacaga
gatcgttacgaattccatgttgctgcatctgataagggcattcctagccaccgtggaaca
gctgtggttgttgtgagggtgttggaccgtaatgacaatgaccctaaattcatgttgaat
ggttatagcttctcagtcttggagaatatgcctaaacttagtccagttggaatggtgaca
gtgattgatgcagacaaaggtcagaatgcacaagtacatctgtctgtggagccagacaat
ggcaagtttgtcatccagaatgggactggtactatcctttctagtcattctcttgataga
gagaaggagaacagctatacctttcgtttgaaagcagttgatggtggggacccaccaaga
tcatcctatgtcggtgttactatcaacgtattggatgaaaatgacaatgctccctatgtc
actaagccttcaaactcctcctacaaatgcctttcttctttaactaaccccgaaagccga
gtggtgagagtggaggcagaggacattgatactggtcccaatgcagagctacttttcagt
atttccagtggcaacccacacaacctcttccgcatttccccaaccgatggggaaatcact
ctagccaaggaattagctcccaggcacaatgggcttcatcgtctggtggtcaaggtcagc
gacaaaggcaaaccaccaagacataccacagctctaatacacatttatgtgaatgagaca
ttcaacaatgtcactctgttggagtcattggtggggcacagtctcaataccccactggac
ttagacattgctggagatcctgagtataataattctgcccatcgcagcaatatcatgtat
ggaagccttgcaggagtgacagctgtcttgctggtcattgtggtggtggtggtcatccga
caccagtggcaaaaggaagcaaagggtggctaccaggcaggcaagaaggagaccaaagac
ctgtatactcctaagcagggtcacaagggcagcaaggctaaaaagtggaagaaaggcaaa
gctccaaaaccaactaaacctttagaagaggatgaagaagttgaggaggccaaccttcag
aaaagtttaaatttcaaccatgacagactcaatgacagccccagaatccacctgccgctg
aactatcccccaggaagtcctgacctgggtcgacactaccgctccaactctcccctgccc
tccattcaacttcagccacagtctccatcagcatccagtaaacaccaggttgtgcaggat
ctccctgttgctaactcgtttgtgggagcaggtgatgacaactcaactggttctgaccag
tattcagattacagttacaaagcaaacccagcaaagtacagcctgaaacagcttcctcat
cgtagagtgaccttctcaacaaccaatcaaacacaggaccaacacgactcctcccagcac
agttattatgacagtggactggaagaatcagaaacacccagcagtaagtcatcatcagga
ccacgtattggaccccttgccctccctgaggaccactatgagaggaccacccccgatggc
agcattggcgagttagaacaccctgaaaatgatattcggtccctgcctgatgtagccatg
actggtaactgcactcaggaatgcaccgagttcggccactcagacacctgttggatgcca
gggcagccatctcccgttcgcaagacaaggaacacccccaaactgtccacctttttgcct
taccaggagaagggtaacgtggaccgtctcggtccagggggctcgaggttgccagatgag
cgatgtgccaaggtggccagtgtgagattgctgccttcccatagtgcttactcctgcagc
agccatgagccaggccaggcccctgccatagaggagacttccaagaaagagatctacctg
tga
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