Scleropages formosus (Asian bonytongue): 108934259
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Entry
108934259 CDS
T04919
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108934259 (vldlr)
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108934259 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_3
DUF5050
Motif
Other DBs
NCBI-GeneID:
108934259
NCBI-ProteinID:
XP_018607358
UniProt:
A0A8C9VD01
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Position
6:complement(29484316..29503054)
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AA seq
861 aa
AA seq
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MVTSILGFLILPICLQQFAYVWGSQAECDPSQFQCGNGRCIPSVWQCDGDEDCSDGSDES
TCVRKTCAEVDFVCRNGQCVPKRWHCDGEPDCEDGSDESPDVCHTRTCRVNEFSCGAGTT
QCIPVFWKCDGEKDCDNGEDEANCGNITCAPLEFTCASGRCVSQNFVCNGEDDCGDGSDE
MDCAPSSCGPSQFQCGNATCIPDSWVCDNDVDCQDQSDESPQRCGRNPTPPAKCSSSEIR
CSSGECIHRKWRCDGDADCKDGSDEANCPVRSCRPDQFKCDDGSCIHGSRQCNGLRDCSD
GSDELNCKNMTQCSSPDKFKCRSGECIEMSKVCNKVRDCSDWSDEPLKECNVNECLQNNG
GCSHICQDNVIGYECDCTPGLQLIDRKTCGDINECLNPGICSQICINLKGGYKCECHNGY
QMDSSTGVCKAVGKEPCLIFTNRRDIRKLTLERREYTQIVEQLRNTVALDADFSQQMIFW
ADLGQKAIFSTSLEKRDGSTITKVIDNVHTPVGIAVDWIYKNIYWSDLGTKTISVANFNG
TKSKVLFSSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVDTDIQWPNG
ITLDLIKSRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGEN
EAIYGANKFTGSDVVMLASNLNEPQDIIVYHELIQLSGTNWCSDKGANGGCAFMCLPAPQ
INKHSPKYTCVCPGGMELAADGFSCRPATISAHPGDGKVLVHPTHASEGNVSTSIHEVNS
SAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNKKSMNFDNPVYLKTTEEDLNIDISR
HSSSVGHTYPAISVVNTDDDL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctattctgggctttcttattctgccaatatgtcttcagcagttcgcctat
gtgtggggatcccaggcagaatgtgatccctctcagttccagtgcggaaatggccgctgt
attccctcagtgtggcaatgtgatggcgatgaagactgttctgatggtagtgatgagagc
acctgcgtgaggaagacctgcgcagaggtggacttcgtgtgccgcaatggccagtgtgtt
cccaagagatggcactgtgatggcgagcctgactgtgaagatgggtccgatgagagccct
gacgtctgccacacacggacctgtcgagtgaatgagttcagctgcggggcaggcacgacc
cagtgcatcccagtgttctggaaatgtgatggagagaaggactgtgataatggggaggat
gaagctaactgtggcaacatcacctgcgcccccctggagttcacctgtgcaagtggccgc
tgtgtgtctcagaactttgtgtgcaacggtgaggacgactgcggcgatggcagcgacgag
atggactgtgcgccttcatcctgcggccccagccagttccagtgtggcaatgccacctgt
atacctgacagctgggtatgtgacaatgacgtggactgccaggaccagtcggatgagtct
ccacagcgctgtggccgcaaccccacgccacctgccaagtgctcctcgagtgagatacgc
tgcagctcaggtgaatgcatccaccgcaagtggcgctgcgacggtgatgcagactgcaag
gatggcagcgacgaggcgaactgccctgtccggagctgcagaccagaccagtttaagtgt
gatgatggcagctgcatccatggcagccggcagtgcaatgggttgcgtgactgctcggat
gggagcgatgagctgaattgcaaaaacatgactcagtgcagcagcccagataaattcaag
tgccgtagtggggagtgcattgagatgagcaaggtgtgcaacaaggttcgggactgctca
gactggagcgatgagcccctcaaggagtgcaatgtgaacgaatgccttcaaaacaatggt
ggctgctcccacatctgtcaagacaatgtgattggctatgaatgtgactgcactccaggc
ctgcagctaatagaccgcaagacctgtggtgatattaacgagtgcctaaaccctgggatc
tgtagccagatctgtatcaacttgaaggggggttacaagtgtgagtgtcacaatggatac
cagatggactcttccacaggcgtgtgcaaggctgtaggcaaggagccatgcctgatcttc
acaaaccggcgtgacatccgaaagctgacactagagcggagggagtacacccagattgtg
gagcagctgcgcaacactgtggccctagatgcagatttctcccagcagatgattttctgg
gctgacctaggacaaaaggcaatcttcagcacatcacttgagaagcgggatgggagcacg
atcacgaaagtaattgacaacgtgcacactcctgtcgggattgcagtggactggatttac
aagaacatttactggtcagacctgggtaccaagaccatctctgtggctaactttaatggc
accaagagcaaggttttgttcagcagtggactgaaagagccagcctccattgctgtggat
ccactctctgggtttctgtattggtcagactggggtgagccagccaagattgagaagtca
ggcatgaatggtgtagaccggcaagttctggttgatactgatattcagtggcctaatggg
atcactttagacctcattaagagcaggctctactgggttgactccaagctacacatgctt
tgtagtgttgatctaaatggggacaaccggcggaaagtgctccagtctcctgactatctt
gcacatccctttgctcttacggtctttgaggatcgagtgttctggacagatggggagaat
gaggcgatctacggtgccaacaaattcacaggatcagatgtggttatgctcgccagcaac
ctgaatgagccgcaggacatcattgtttaccatgagctcatccagctatctggaaccaac
tggtgcagtgacaaaggggccaatgggggctgtgccttcatgtgtttaccagcaccacag
atcaacaagcactcaccaaagtacacatgtgtctgtccaggagggatggagcttgctgca
gatggcttcagttgcagaccagccaccatttctgcacacccaggggatgggaaggtacta
gtacaccccactcatgcttcagaagggaatgtgagcacctctatccatgaggtgaattcc
tcagccaaaggatcagctgctgcctgggccatcctcccagtcttactactggccatggca
gctgcaggagggtacttgatgtggcgcaactggcagctgaagaacaaaaagagcatgaac
tttgacaatcctgtgtatctgaaaaccactgaggaggacctcaacatcgacatcagtcga
catagctcatctgtgggccacacctatcctgctatatcagttgtgaatacagatgacgat
ttgtag
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