Scleropages formosus (Asian bonytongue): 108934326
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Entry
108934326 CDS
T04919
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108934326
09122 Translation
03013 Nucleocytoplasmic transport
108934326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108934326
03041 Spliceosome [BR:
sfm03041
]
108934326
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108934326
Spliceosome [BR:
sfm03041
]
Complex C
Other components
EJC/TREX
108934326
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108934326
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
108934326
NCBI-ProteinID:
XP_018607470
LinkDB
All DBs
Position
4:29335146..29370895
Genome browser
AA seq
1558 aa
AA seq
DB search
MAPSVLPADWIKNWEKSGKTEFLQLCHNLADKTIDDVTVQDIQGILYELSWHVIRGNLKV
DLAASVLGDVMELREDMSSILADVFCVLDIETSCFEEKSKRDHFTQLVGACLFFMPDAVL
KERLDPETLESLGLVKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFLPLIKSYMCEPQTLC
HILGFKFKFHQEPNEETPSSLYHVAAALLQHNLIKLEDIYVHLLPLDATIMEEHKHEIME
AKQIARKLTMVVVPSEKSEDKEKDKEEEKTEKRPDNQKLGLLEALLRIGDWQHAQSIMEQ
MPPFYATSHKPIALALCQLVHLTVEPLYRRSGIPKGAKGRVLTPLQNKRAPKPAETFEDL
RREVFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQNDSKLDKDKMDTLLSCFLSIADQ
VLLPSLTLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTVDRA
KYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTSLNY
DVLAYCIIEALANPEKEKMKHDDTTISAWLQSLASLCGAVFRKYPIELAGLLQYVTNQLK
AGKSFDLLILKEVVQKMAGIEITDEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRL
KDALLDHDLALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLS
TEDYIKRVPPIDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKVHKY
ITACEMVMAPVHEAVVSLHPPKVWDDIRPQFYATFWSLTMYDLAVPSSAYDREANKLKAQ
MKAIDENQEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLAKST
KNETITKFLQLCVFPRCIFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYTVA
SCTENEARRYGRFLCCMLETVTRWHSDRAIYEKECGNYPGFLTIFRATGFDGGNKADQLD
YENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPCYPKVLNLGQALECRVL
KICQEEKEKRPDLYALAMGYSGQLKSRKVHMVPENEFHHKEQPVRSATPANIQNGPGSAS
KPAPTKPEDGMTDDADKSKDKSQGASKPANKANSTATKVATSNGNSAPNSTKAVKEKDDK
EKSVKEKKEKKERTPGSTPETKAVGKDKLKEERLGKDEKARDGKERTPKTSEDKMGKEEK
ARASCNLEFRSDKESSRERDVSKESKMKDSSKGEKGSTAASLKSPVPRSESAESEREQKR
RKLDTHSSPSHSSTVKDNLNELKDSSSKHYVNHNTATQSKSKEREMDKKDSEKSRDRSKE
REKKEDKDRKDRKRDHSNSDREMSQELKRRKDENGTNSSKHSKSASPVDSPRPTDKDKSK
SSKSSSKEKTDPAKPERNSTGGKKESRHDKEKSVKKEKRDSSGGKEDKKHHKSSEKHR
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcggtcctccctgctgattggatcaaaaactgggaaaaatcaggcaaaact
gagtttttacaattatgccacaatcttgcagacaaaaccattgatgatgtgacagtacaa
gatattcagggcattctgtacgagctgtcttggcatgtcatccgaggaaacctcaaggtt
gacctggccgccagcgtactgggggatgtcatggaattacgggaggacatgtcatccatt
ttagctgatgttttttgtgtattagatatagaaactagttgctttgaggaaaaaagcaag
cgtgaccattttactcagttagtgggagcttgtctgttcttcatgccagatgctgtgctg
aaggaacgtctagacccagaaacactggaatcccttgggctcgtcaagcaagcacaacag
ttcaaccagaaaattgtcaaaatcaagaccaagctattttataagcagcagaaattcaac
ttgttaagagaggagaatgaaggttatgccaagctgatcacagagctggggcaggacctg
tctggcaacattaccagtcatcttgtccttgaaaatataaagtcattgatagggtgcttt
aatcttgacccaaaccgtgtgctggacattatcttggaggtgtatgaatgtcgctcggac
caagatgaattctttctgccccttatcaagtcctacatgtgtgagccccagaccctctgc
catatcctgggcttcaaattcaaattccatcaggaacccaacgaggagactccttcatcc
ttgtaccatgttgctgctgcactgcttcagcacaacctcatcaagcttgaggacatctat
gtgcatctgctacctctggatgctacaatcatggaggagcacaagcacgagatcatggag
gctaagcagatcgcccgcaaactcaccatggtcgtagtgccttcagagaagagtgaggat
aaggagaaagacaaagaggaggaaaagacagagaagagacctgataaccagaagctgggg
ctcttggaagccctgctgaggattggggactggcaacatgctcagagcatcatggagcag
atgccacccttctatgccacctcacacaagcctattgccttggcactgtgccagctggtg
cacttgaccgtggagccgctttaccgcagatctggcatccctaaaggtgccaaaggtcga
gttttgacacctttgcagaacaaacgagcccccaagccagctgagacttttgaagatctg
cgtagggaggtcttcagcatgctttgttacctaggcccgcacctgtcccacgaccctatc
ctctttgcgaagatcgtgcggctcggcaagggtttcatgaaagagtatcaaaatgacagc
aaacttgacaaggataagatggataccttgctgagctgcttccttagcattgctgatcag
gtgctgctgccctcgttgaccctgatggagtgcaatgcctgcatgtctgaggagctctgg
ggcctcttcaaactctttccctaccagcacaggtaccggctgtatggacagtggaagaat
gaaacctacaccagccaccctctgcttgttaaagtcaaagcacagacagttgaccgagcc
aaatacatcatgaagcgattgaccaaggagaatgtgaaaccctcgggaaggcagatcggc
aagctgagccacagcaatcccaccatcctgtttgactatattctgtcacagatccaatgg
tatgacaacctcattacacctgtggtggattcattgaaatacctcacttcactgaactat
gatgttctggcctactgcatcattgaagcactagccaacccagaaaaggagaagatgaag
catgatgacacgactatttcagcctggcttcagagtcttgcaagtctctgtggagctgtt
ttcaggaagtatcccattgagctggctggccttctgcagtatgtgacgaatcaacttaag
gcaggaaagagtttcgatctgctgatcctgaaggaagtggtccaaaagatggctggtatt
gagatcacagatgaaatgacaatggagcagcttgaggctatgacagggggtgaacagctt
aaggcagagggtggctactttggtcagatcaggaacaccaagaagtcatcacagcgtctt
aaagatgcccttctagaccatgacctggccctaccattatgtctgctcatggcacaacag
aggaatggtgttgttttctcagagggaggggaaaagcacctaaaactggtgggaaagctc
tatgaccagtgccatgatacattggtccagtttggtggcttcttagcttccaacctcagc
acagaagactacatcaaacgtgtaccccccattgatgtcctgtgcaaccagttccacaca
ccccatgatgctgctttcttcctatctcgacctatgtacgcccatcagatactgtctaag
tatgatgaactgaagaaggcagagaaaggcaaccggcagcagcagaaagtgcacaagtac
atcactgcctgtgaaatggtcatggcacctgtgcatgaggctgtagtgtccctccacccc
ccaaaggtgtgggatgacatcaggccccagttctatgccactttttggtcactgaccatg
tacgacctggccgtgcccagcagtgcttacgacagagaagccaataagctcaaggcacag
atgaaagccattgatgaaaatcaggaaatgcccttgaacaagaagaaaaaagaaaaggag
cgttgcactgcacttcaggataagcttcaggaggaggagaaaaagcagttggagcatgtg
cagagagttctgcatcggctcaagttggaaaaggacaactggctgttggccaaatcgaca
aagaatgaaacaattacaaagttccttcagctctgcgtttttccacgttgcatcttctct
gcaattgatgcagtgtattgtgcacggtttgtggagctggtacatcagcagaagacacct
aacttttgcaccttactctgctatgaccgagttttctcggacataatttatacggtggcc
agctgcacagagaatgaggctcgacgttatggccgcttcctgtgctgcatgctggagact
gtgacccgttggcatagtgaccgtgccatctatgaaaaggagtgtggcaattacccaggg
ttcctcaccatctttagagcaactggctttgatggtgggaacaaagcagaccaacttgac
tatgaaaacttcagacatgttgtgcacaaatggcattacaagttaactaaagcctctgtc
cattgtttggagacgggcgagtacacacacatccgcaacatccttattgtgttgaccaag
atactaccctgttaccccaaagtgctgaacctgggtcaggcgctggaatgccgtgtcctt
aagatctgccaggaggagaaggagaagaggcctgatctctatgcgttggctatgggctat
tctggccagttgaaaagcaggaaggtacacatggtccctgaaaatgagttccatcacaag
gagcagccagtgcgcagtgctaccccggcaaacatccagaatggaccaggcagtgccagc
aaacctgcaccaacaaagccagaggatggcatgactgatgatgcagataaatccaaggat
aaatctcagggggcttctaaacctgcaaacaaagccaacagcacagcgaccaaagtcgcc
acgagcaatggaaacagtgctccaaatagcaccaaagctgttaaagaaaaagatgacaag
gaaaaaagtgtgaaagagaagaaggagaagaaagaaaggacaccaggtagcactccagag
accaaagcagtggggaaggacaagctgaaagaggagaggcttggcaaggatgagaaggcg
cgtgatggcaaagagaggactccaaagacgagtgaggataagatgggaaaagaagaaaag
gccagggccagctgcaacctagaatttagatctgataaggagtcatccagggagcgagat
gtgtctaaggagtccaagatgaaggacagcagcaagggagagaagggctccacagcggca
tccttgaagtcacctgtccctcgatctgagtccgctgagtctgagcgtgaacaaaagagg
cgaaaactcgacacccactcgtcaccatcacactcctctactgttaaggacaatctcaac
gaactcaaggattcttcgtcaaagcactacgtcaaccacaacacagccacacaatccaag
agcaaagaaagggagatggacaagaaagattcagagaaatccagagaccgatccaaagaa
agagaaaaaaaagaagataaagacaggaaggacagaaaacgagatcattcaaacagtgat
cgcgaaatgagtcaagagctgaagcgcagaaaagatgaaaatggaacaaattcctctaaa
cacagcaagagtgcaagccctgtagactcgccacgtcccacggacaaggacaaaagcaag
agctcaaagtcatccagcaaggaaaagactgacccagcaaaacctgaaaggaactccact
ggaggcaaaaaggaatcgagacatgacaaagaaaaatctgtgaagaaagaaaaaagggac
agcagtggtgggaaagaagacaaaaaacatcataaatcctctgagaagcacagataa
DBGET
integrated database retrieval system
