Scleropages formosus (Asian bonytongue): 108934408
Help
Entry
108934408 CDS
T04919
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04810
Regulation of actin cytoskeleton
sfm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108934408
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108934408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108934408
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108934408
Factors involved in mRNA localization
Other mRNA localization factors
108934408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
zf-CW
Motif
Other DBs
NCBI-GeneID:
108934408
NCBI-ProteinID:
XP_029107038
LinkDB
All DBs
Position
4:complement(35220121..35244891)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSTYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IINISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSVSPQYNLCEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAVRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRSVGPSSTQLYMVRTMLESLIADKSGSKKTLRSCLDGPIVMAIEDFHKQSFF
FTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLSDQIFAYYKAMAGSV
LLDKRFRAECKNDGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLIEVNRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLDVRMKRLEAKYAPLHLVPLIERLGTPQQISIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCAIVILLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHIRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccaagtgacactagaagatgccctgtccaacgtggacctgctggaggagctg
ccgctcccagaccagcaaccatgcatcgaacccccaccctcctccatcatgtaccaggcc
aactttgacaccaacttcgaggacaggaatgcgttcgttacgggcatcgcgcgctacatc
gagcaggccaccgtccactccagcatgaatgagatgcttgaagagggacatgaatatgct
gtcatgctgtacacctggaggagctgttccagagccatccctcaggtaaaatgcaacgag
cagcccaacagagtggagatatacgagaagacagtggaggtgttggagcctgaggtcacc
aagctcatgaagttcatgtactttcagcggaaggccattgagcgtttctgcagcgaggtc
aagcgcttgtgccacgctgagcgcaggaaggacttcgtttcggaggcatatctgctcacc
ctcggcaagttcatcaatatgttcgcggtcctggacgagctgaagaacatgaagtgcagc
gttaagaacgaccactccacgtacaagagggcggctcagtttctgaggaagatggctgat
ccgcagtcgatccaggaatctcagaacctctccatgttcctggcgaatcacaacaggatc
acgcagtgtcttcatcagcagctggaggtgatcccagggtacgaggagcttttggcggac
atcatcaacatcagcgtggactactatgagaataagatgtacctcacccccagcgagaaa
cacatgctgctgaaggtgatgggcttcggcctctatctgatggacgggaatgtcagcaac
atatataaactggatgccaagaagcggataaacctcagcaagatcgataagttcttcaag
cagctgcaggtcgtacccctgtttggggacatgcagatcgaactgtcgcgttacatcgag
accagcgcccactacgaggagaacaagtccaagtggacctgcactcagagcagcgtcagc
ccccagtacaacctgtgcgagcagatggtgcagatccgggacgaccatatccgcttcatc
tcggagttggcccgctacagcaacagcgaggtggtcaccggctccggcctggacagccag
aagtcggacgaggagtaccgcgagctcttcgacttggcgctcagaggcctgcagctgctg
tccaagtggagcactcacgtcatggaggtgtactcttggaagctggtccacccgacagac
aagttctgtaacaaggactgtcccggcaccgccgaggagtacgagcgagccactcgctac
aactacaccagcgaggagaagtttgccctggtggaggtcatcgccatgatcaagggcctg
caggttctcatgggccgcatggagagcgttttcaaccaggcggtccggaacaccatctac
gccgcgctgcaggactttgcgcaggtaaccctgagggaaccgctgcggcaggctgtgcgc
aagaagaagaacgtcctcatcagtgttcttcaggccatccggaaaacaatttgcgattgg
gaagggggcagggagccacccaacgacccctgtctacgaggcgagaaggaccccaagggt
ggctttgacataaaagtacctcgtcgctccgtgggaccctccagcacgcagctgtacatg
gtgcgcaccatgctggagtctctgatcgccgacaagagcggctccaagaagacgctgcgc
agctgcttggacggccccatcgtcatggccatcgaggacttccacaagcagtccttcttc
ttcacacaccttctcaacttcagcgagacgctgcagcagtgctgcgacctgtcccagctg
tggttccgcgagtttttcctggagctcaccatgggacgccggatccagttccccatcgag
atgtccatgccgtggatcctcaccgaccacatcctggagaccaaggaaccctccatgatg
gagtacgttttgtatccgctggacctgtataacgacagcggctactacgctttaacgaag
ttcaagaagcaattcctgtatgatgaaattgaggcagaggttaatctctgtttcgaccaa
tttgtctacaagttatcagatcaaatatttgcttattacaaagcaatggctggaagtgtc
ctactggacaaacgttttagggccgagtgcaaaaacgatggcgtgatcatcccgtatcca
ccctccaaccgctacgagacactgctgaagcagaggcatgtccagctcctgggacgttcc
attgacctgaaccgcctcatcactcagagaatctcggctgccatgtacaagtccctggac
caggccattagtcgttttgagagcgaggacctcacgtccattgtggagttggaatggctg
atagaagtgaatcggctgacgcaccggttgctgtcaaagcacatgaccctggacagcttt
gacgccatgttccgggaggccaaccacaacgtctcggctccctacggccgcatcaccctg
cacgttttttgggagctgaactttgactttttgccaaactactgctacaacggatccacc
aatcgattcgtgcgcacggcgattcccttcacccaggagccccagagggacaaaccagcc
aacgtccagccgtactacttgtatggatccaagccgctgaacatcgcctactcccacatc
tacagctcctaccggaactttgtggggccgccccacttcaagaccatttgtcgtctccta
ggctaccagggtattgccgtagtaatggaggagctgctcaagattgttaaaagcttgctt
cagggcaccattctgcagtatgtgaagaccctgattgaggtcatgccgaagatctgtcgg
ctgccaaggcacgagtacggatctccaggcatcctggagttcttccaccaccagctgaag
gacatcatcgaatacgccgagttgaagacggatgtctttcagagcctgagggaggtcggc
aacgccatcctcttctgcctgctcattgagcaagccctgtcgcaggaagaagtgtgtgat
ttgcttcacgcggctcctttccaaaacattctcccgagagtttacattaaagagggggaa
cgtctcgatgtaaggatgaaaaggctcgaggcaaaatatgccccacttcacctggttcct
ctgatagaaaggttagggacgccgcagcaaatctccatcgcccgcgagggggacctgctg
accaaggagcgcctctgctgcggcctgtccatgttcgaggtgatcctgacgcgcatccgc
agctacctgcaggacccggtgtggcgcgggccgccgcccaccaacggcgtcatgcacgtg
gacgagtgcatggagttccaccggctgtggagcgccatgcagtttgtctactgcattccg
gtgggcaccaatgagttcaccgcagagcagtgcttcggagacgggctgaactgggccggc
tgcgccatcgtcattctgctcggtcagcaacgccgctttgacctctttgacttttgctac
catctgctgaaagtgcaaagacaggatggcaaggatgagatcattaagaatgtgcccttg
aagaaaatggcagaccggatcagaaagtatcaaatcctgaacaatgagattttcgccata
ctcaacaagtacatgaaggcggttgaaacggacagctccaccgtagaacacattcgctgt
ttccagccgcccatccaccagtccctggccacgacctgttga
DBGET
integrated database retrieval system
