Scleropages formosus (Asian bonytongue): 108934435
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Entry
108934435 CDS
T04919
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108934435
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfm01001
]
108934435
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108934435
03036 Chromosome and associated proteins [BR:
sfm03036
]
108934435
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108934435
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108934435
Protein kinases [BR:
sfm01001
]
Serine/threonine kinases: Other
TAF1 family
108934435
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108934435
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108934435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
108934435
NCBI-ProteinID:
XP_018607778
UniProt:
A0A8C9R859
LinkDB
All DBs
Position
4:29753701..29775209
Genome browser
AA seq
1972 aa
AA seq
DB search
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEDDSVLDTESKKHLAGLGSLGLGTLITEIT
ASEEDVAEEERDPSGTDAEGWVKSTEDAVDYSDINEVAEDETRKYRQAMGSLQPSRRTDD
EDDYDADCEDIDAKLMPPPPPPTLQTSGKKEEQSTQPANAVGDEGDGIILPSIIAPSSVG
DRVDFSSSSDSESETDRPAQGPGIGGPPGSLTLPLAGIMHRDAAKALPCVTELFPEFRPG
KVLRFLRLFGPGKNMPSVWRSARRKRKRKHRDPQPGTPPPEAEPVEPSPEKKSGWAYEYA
PPPPPEQCLSDDEITMMAPVESKFSQSAGDGDKIPESRPKVAEWRYGPAQLWYDMLGVAE
DGGGFHYGFRLREETSEKPGEQEPKPVPAQEESDVDNDDQTLENELFLMVTQLQWEDDII
WNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLSRSNSQLVPPTPPPITKAPTI
SSGSSKRDKHNQDQQASHEDDSPWFSIFPIDNEELVYGRWEDNIIWDDQSMDRLLSPPVL
TLDPNDENIILEIPDEKEEQTSNSPSKENKKESALKKSRILLGKTGVIKDEPQQNMSQPE
VKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRLFHRPSL
KKYSYGTLSQPGPHPVQPLLKHIKKKAKMREQERQASGGGDMFFMRTAQDLTGKDGDLIL
AEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLL
QAFENNLFRAPIYLHKMPETDFLVLRTRQGYYIREVVDIFVVGQECPLFEVPGPNSKRAN
THIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSN
WWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSFFAPEEENEEDFQ
MKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKVPNKPTQQKDDKE
PQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSG
EGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEM
GKNIENMLQNKKTSSQLSHEREEQERKQLQRMLMGEESDRDKGRKERRKGLSSAHSTSSH
KDDDASSVTSLTSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYTRIRTTKDDEF
IRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKFKGPPEKKAKKVKERPDLKLKCG
ACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVL
GKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNKPHKSIHRRRTDPMVTL
SSILEGIINDMRDHPNTYPFHTPVNGKVVKDYYKIITRPMDLQTLRENVRKRMYPSREEF
RESVELIVKNSATYNGAKHPLTQVAQSMLDLCDEKLKEKEDRLVRLEKAINPLLDDDDQV
AFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLENIRKNISKHKYQNR
ETFLNDVSLIHTNSVKYNGSDSPYTKTALEIVNVCKQTLAEYDEHLTQLEKDISTAKEAA
LDAADLESLDPMTPGPYTPQPPDLYDSSNSMGLHREASLFVDGPPASTPEKRGGQGRHGR
GRLGEEESDVDIEGFEEDDDGKPKTPAPAEDGEGDLEDEDDDEDMLLPPRRRLHGHDEDD
EEDEGSSRPAQASVLYQDLLMSDGEDDASEEEGDNPFSSIHLSESGSDSDREVETRGAPS
RGHQEMARMGLEQEESMMSYEGEGADEGQMEDSNVSYGSYDEAEGRTQRQARGLASGEGY
GQSEDDEEDDEEESGARRRGPSVLSQVQLSEDEEDSEEFRSIGGDSDMDSDA
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcagacagtgatgaggaccaggatcgtccattctctctcactggcttcctt
ttcggaaacatcaatgaagatggtcagctagaagatgacagcgtgctggatacggagtcc
aagaagcacttggctggtttggggtccttgggcctgggtacgctcatcactgaaatcact
gccagtgaggaagatgtggctgaagaggaaagggatccaagtggtactgatgcagaaggc
tgggtaaaaagcacggaggatgctgtggactactcagacatcaatgaggttgccgaggat
gagaccagaaagtaccgtcaagccatgggctctctgcagccctccaggagaacagatgat
gaggatgactatgatgctgattgtgaagacattgatgcaaagttaatgcccccaccaccg
ccacccactttgcagacctcaggcaagaaagaggaacaatctactcagcctgcaaatgca
gtgggggatgagggagatgggatcatactgccctccatcattgctccatcatctgttggt
gacagggtggatttcagcagctcttcagattcagagtctgaaacagacaggccagcccag
ggtcctgggattggggggcctcctggtagcctgacgctgccccttgcaggcatcatgcat
agagatgctgccaaggccctgccttgtgtcactgagctctttcccgaattccggcctggg
aaggtgctgcgcttcctccgcctgtttggcccagggaagaacatgccatctgtttggcgt
agtgcccgtaggaagcgcaaacggaagcaccgtgacccacagcctggaacgcctccacct
gaggccgaaccagtggagccaagccctgagaagaaatcaggatgggcctatgagtatgcc
ccacctccacccccagagcagtgtctttctgatgatgagattaccatgatggctccagtg
gagtccaagttttctcagtcagctggcgatggggataagattccagaatctcgcccaaag
gtggcagaatggcgctatgggccagcccaactgtggtacgacatgctgggtgttgcagaa
gatgggggtggcttccactatggcttccgtttgagagaagaaacatccgagaagccaggc
gagcaggaaccaaagcctgtgccggcccaagaggagagtgatgtggataacgatgaccag
actttggagaacgagctcttcttaatggtgactcaactgcaatgggaagatgatatcatc
tggaatggagaggatgtgaagcacaagggtactaagacacagcgtgccagcctagcagga
tggctgccatctagcatgactcgcaatgctaatgcatataacgcgcagcagggtcttagc
cgcagtaactctcagttggtgccccccactccccctcctatcacaaaagcacccactatc
agctctggatccagtaagcgggacaaacacaaccaggaccagcaagcttcccatgaagat
gattccccatggttctccatcttcccaattgataatgaggagttggtgtatggacgctgg
gaggataacatcatctgggatgaccaaagcatggatcgattgctttctcccccagtcctc
acgctggaccctaatgatgaaaacataattttggaaatccctgatgagaaggaggagcaa
acatcgaactctccatccaaagagaacaagaaagaatcagccctgaagaagagtcgcatc
ctactgggaaaaactggtgtaatcaaggatgagcctcagcagaacatgtctcaaccagaa
gtaaaagacccctggaacctgtccaatgatgagttctattaccccaagcagcaaggtctt
agggggacttttggtggcaacatcatccagcactccattcctgctgtggagttgaggcag
cctttcttcccaacacacatgggtcccatgaagctgcggctgttccatcggccatcactg
aagaaatactcttacggaaccctttctcagccaggtccccatccagtacagcccctcctc
aaacacatcaaaaagaaggccaagatgcgagagcaggagcgccaagcttcaggtgggggg
gatatgttcttcatgcgtacagctcaggacttgacaggcaaggatggcgacctgatccta
gcagagtacagtgaagaataccctcctctcatcatgcaagtaggcatggccaccaagatc
aagaactactacaagagaaaacctgggaaagaccctggagcaccagactgtaaatatggg
gaaactgtctattgccatacttcgccattccttggttctttgcatcccggccagctgctg
caggccttcgagaacaaccttttccgtgcccccatctatctgcacaagatgcctgagacg
gatttcctagtgttgcgcacgcggcagggttactacattcgtgaagtggtggatatcttt
gtggtgggtcaggagtgtccattgttcgaggtacctggtcccaactccaagagagccaac
acccacataagagacttcctgcaggtgttcatttatcgcttgttctggaagagcaaagat
cgacctcggagaatccgcatggaagacatcaagaaggccttcccatctcattcagagagc
agcatccgcaagcgccttaaactctgtgctgactttaagcgcacaggaatggactctaac
tggtgggtcctgaagccagacttcaggctgcccacagaggaagagatccgagctatggtc
tccccagagcagtgttgtgcctactacagcatgctggtggcagagcagaggctaaaggat
gctggatatggagagaagtccttctttgcaccagaggaggagaatgaagaagacttccag
atgaagatagatgatgaggtgcgcacggccccctggaacaccacacgagccttcattgct
gccatgaaggggaagtgcctgctggaagtcacaggcgtagcagacccaactggctgcggg
gagggtttctcctatgtcaaggttcccaacaaaccgacacagcagaaggatgacaaggaa
cctcagccagccaagaaaactgtgacaggcacagatgctgacctgagacgtctgtctctc
aagaatgccaagcaactgctgcgcaaatttggggtcccggaagaagagattaagaagcta
tcgcgttgggaggttatcgacgtggtacgtaccatgtccacagaacaggcacgctcaggc
gagggaccaatgagcaagtttgctcgagggtcacgcttttcagtggcagaacatcaggag
cgctacaaggaggaatgtcaaagaatctttgacttgcagaacaaggttctggagtcaact
gaggtcctctcaacagacacagacagcagttcggctgaagacagcgactttgaagaaatg
ggcaagaatattgagaatatgctgcagaacaagaagacaagctcccaactctcccatgag
agggaggagcaggagagaaagcagctgcagaggatgctgatgggggaagagagtgaccga
gacaaggggcggaaagaacgccgcaaggggttgtcaagtgcccactctaccagctcccac
aaagatgatgatgcctcttctgttaccagcctgacctcctctgccactggaagaaggcta
aagatataccgcacctttagggatgaggacggcaaggaatatgtgcgctgcgagacggtc
cgcaagcccgctgtcattgatgcgtacacccgtatccgtactaccaaggatgacgagttt
atacggaagtttgcactctttgatgagcaacaccgagaggagatgaggaaggagcgacgg
cgcatccaagaacagctgagacgactcaaacgtaaccaggagaaggataagtttaaggga
ccccctgagaagaaagccaagaaggtcaaagaacgtcctgaccttaagctgaagtgcggt
gcttgcggtgccataggccacatgcgcaccaacaagttctgtccactatactaccaaacc
aacgctccaccttccaacccggtggcaatgacagaagagcaggaggaagaactggagaaa
acagtcatccacaatgataatgaggagctgattaaagttgagggtaccaagattgttttg
ggaaaacaactcattgagagtgctgacgaggtacgcaggaagtctctagtactgaagttc
cccaaacagcagctaccacccaagaagaagaggcgcgtgggaaccacagtgcactgtgac
tacttgaacaaacctcacaagtccatccacaggcgacggactgaccccatggtcacgttg
tcatctattctagagggcatcatcaatgacatgcgggaccaccctaatacgtatccattt
cacactcctgtcaatggcaaggtggtaaaggactactacaagatcatcacaaggcccatg
gacttgcagacactacgggagaacgtgcggaagcgcatgtacccctcgcgagaagagttc
cgtgagagtgtagaactaattgtcaagaacagtgccacatacaacggtgcgaaacaccct
ctcacccaggtggcccagtccatgttggacctctgtgatgagaagctcaaagagaaagag
gacagactggtaaggctggagaaagccatcaatcccctgttagatgacgacgatcaagtg
gccttctcctttatcttggacaacattgtcacccagaagatgatggctgtcccagattcg
tggcccttccatcatcctgtaaataagaagtttgtaccagattattacaaggtgattgcc
aaccctatggacctggagaacattcgcaagaacatctcaaagcataagtaccagaatcga
gagacattcctgaacgatgtcagtcttatccacaccaacagcgtaaagtataatggctcc
gacagcccttacaccaagactgccttggaaattgtgaatgtgtgtaagcagactctggca
gagtacgatgagcacctgactcagctggagaaggatatctccactgccaaggaagcagcc
cttgatgcagctgaccttgagagcctggacccaatgacccccggcccctataccccacag
cctccagacctctatgacagcagcaattcaatgggtctacacagggaggccagcctgttc
gtggatggccctcccgcctctacccccgagaagaggggggggcagggccgccatgggcgc
gggaggctaggcgaagaggaatcagatgtggacatcgaagggtttgaggaggatgacgat
ggcaaacccaagaccccagctcctgcagaagatggcgaaggtgaccttgaggatgaggat
gatgatgaggacatgctgctgccgccaagaaggcgtctgcatggacacgatgaggacgac
gaggaggatgagggttccagccgtcctgcccaagccagtgtgctgtatcaagacctgctt
atgtctgatggggaggatgacgccagtgaagaggagggcgacaaccctttctcctccatc
cacctgtcagagagcggcagcgactcagaccgtgaggtagagacaaggggagccccatcc
aggggccaccaggagatggcacgtatggggctggagcaggaagagagcatgatgtcatac
gagggcgagggtgcggacgagggccaaatggaggacagcaatgtcagctatggcagttat
gatgaagccgagggacggacacagagacaggcccgcggcctggccagtggtgaggggtac
gggcaaagtgaagacgatgaggaggatgatgaagaggagagcggagcacggaggcgcggc
cccagtgtcctgtcacaagtacagctgagtgaggatgaggaagacagtgaggaattcaga
tctataggtggggacagcgacatggactcagatgcctag
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integrated database retrieval system
