Scleropages formosus (Asian bonytongue): 108934543
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Entry
108934543 CDS
T04919
Symbol
neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04350
TGF-beta signaling pathway
sfm04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108934543 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108934543 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108934543 (neo1)
Cell adhesion molecules [BR:
sfm04515
]
Immunoglobulin superfamily
DCC/UNC5 family
108934543 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_RIMBP2
Tissue_fac
C1-set
GH101_dom-5
Sp38
EphA2_TM
LapA_dom
Herpes_UL74
PRIMA1
Motif
Other DBs
NCBI-GeneID:
108934543
NCBI-ProteinID:
XP_029111973
LinkDB
All DBs
Position
11:1272647..1407060
Genome browser
AA seq
1467 aa
AA seq
DB search
MAERRVRLLLFLALLTFLRSTTGTKHAHTGLNPRPFAAFGFAVEPADTVAIRGAPAVLNC
SVLGDMPARVEWKKDGTFLNLASEERRQLLTDGSLLITNVVHSKHNKPDEGVYQCVASID
SLGIIMSRTARLTVASLPRFSSQPAASVVHQGDSAVMSCEVNPDLVPFTRWERNKEPLIL
DERLVQLPGAALVISNATEADAGLYRCVVENVGPAKASEEAELQVLPEPEVVERKPVFLR
QPQAVTRTAGENVLLPCVVMGYPTPSVRWMLGDKPVQDSEGRLEVVGGGSLQIFNLTEKD
AGIYSCVADNENGTTEARAELTVQAPPRFLKKPSNLYARESMDIVFECEVTGSPPPTVKW
VKNGDAVIPSDYFRIVKEHNLQVLGLVKSDEGFYQCMAENDAGNVQAGAQLVILEHDVAM
PTLPSTSLTSATADRVTPGSGSGGGGGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGDN
IAYSVFYGLEGTARERTVNTTRPGELQVTIQNLMPDTKYVFRVVAHNRNGLGESSTPLRV
ATQAEVQVPGPAPGLQAVSASPTSITVSWEVPLMGNGEIQNYKLYYMEKGMDTEQDIDVG
GLSYTLTGLKKFTEYSFRVVAYNRHGPGVSTDDVAAQTLSDVPSAPPQNLTLEVQNSKSI
MVRWQPPPPGTHNGEIISYKIRYRKGLRKSEATEITAGTQLFQLIDGLERGTEYAFRVLA
MTVNGTGPATDWLTAETFKSDLDETRVPDMPSSLQVRPLVNSIVVSWTPPENQDIVVRGY
TIGYGIGSPHAQTIKVDHKQRYYSIENLDPSSHYVITLKAFNNVGEGIPVYESAITRPQS
DPVDPAVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNSLPKNQKITDA
RYYTVRWKTNIPANAKYKMANTTNLSHVVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGT
TFETIPSSSPKDVTVVSKEERPRTIIVNWQPPTEANGKITGYIIYYSTDVNAEVHDWVIE
PVVGNRLTHQIQDLTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKAESSDKMANDQASGG
PVKPGSRPPPQNYGFGSPVGKPGMSGSSDNHILVIVIIVSVGAFTIILVVVGAFLCTRRT
TSQQKKKRAACKSTNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTDTPIP
RTSQDITPMDGASDNPMHQRRNSYRGHESEDSLSTLAGRRGMRPKMMMPFDTQPPQPVVS
AHPIHSLDTHHHHYHSGSPASSARSFLLQQQGGARPTASPTSHLDRARSQESVRNAPGVD
APPPPGPPGSSADRAEPDGGFLSSGAEDEPGYNPPAAHVRPSHPLKSFAVPAVLPHNPPF
ESPALPSTPLLSQSGLPPPLHSVKTAAISTLGRTRPPLPVLMPSAPDMAEAGKMLEDAES
AYEPDELSEEMAHLEGLMKDLNAITTA
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgggtccggctgctcctcttcctcgctctcctcaccttcctgcgctcg
accaccggcaccaagcacgcgcacacagggctgaacccgagacccttcgccgcgtttggt
tttgccgtggagccagcggacaccgtagccatccgcggtgcgccggctgtgctcaactgc
tcggtgctgggcgacatgccggcgcgggtggagtggaagaaagacggaaccttcctgaac
ctggcgtcggaggagcggcggcagctgctgactgacggctcgctgctcatcaccaacgtg
gtacactcgaagcacaacaagccagacgagggtgtctaccaatgcgtggcatccatcgac
agcctgggcatcatcatgagccgcactgcacgcctgactgtggctagtctgcccaggttc
tccagccaaccggcagcgtccgtggtccaccagggggacagcgccgtgatgagctgtgag
gtgaaccctgacctggtgcccttcactcgctgggagcgaaacaaagagccattgatccta
gacgagaggctcgtccagctgcccggtgccgccctggtcatcagcaacgccacggaagcg
gatgcgggactgtaccgctgcgtggtggagaacgtgggccctgcgaaggctagcgaggaa
gctgagctccaggtgctaccagagccggaggtggtggagaggaagccggtgtttctccgg
cagccgcaggccgtgaccaggacggcgggcgagaacgtgctgctgccctgcgtggtgatg
ggataccctaccccctctgtccgctggatgctcggggacaagcctgtacaggacagcgag
ggtcgcttggaggtggtggggggtggcagtctgcagattttcaacctcactgaaaaggat
gctgggatatacagctgcgtggctgacaatgagaacgggaccacggaggcgcgggcggag
ctcaccgtccaagcccctcctcgcttcctgaagaagccatccaacctttacgcccgggaa
tccatggatatcgtcttcgagtgtgaggtcaccggttccccgccccctacggtcaagtgg
gtgaaaaacggagatgccgtcatacccagcgactacttcagaatcgtcaaggagcacaac
ctgcaggtgctgggcctcgtcaagtcggacgagggcttctaccagtgcatggccgagaac
gacgcggggaacgtgcaggccggcgcgcagctcgtcatcctggagcacgatgttgccatg
cccactctcccgtccacctcactgaccagtgccactgctgaccgtgtaacgccaggctcc
ggcagcggaggaggaggcggtcctacgccttccgccccccgcgacgtcgtggcatcgctc
gtctccacccgcttcatcaagctgacgtggcgcctgccggccgagccccacggcgacaat
atcgcctactccgtgttctacggcctggagggcaccgccagggagcgcacggtcaacacg
acccgccccggagaactgcaggtcaccatccagaacctgatgccggacaccaagtacgtg
ttccgtgtggttgcgcacaaccgcaacggcctgggggagagctccaccccgctgcgggtg
gccactcaggctgaagtccaagtgccggggccagcaccaggtctccaggccgtgtccgct
tccccgacctccatcacggtcagctgggaggttccgttgatgggcaacggtgagatccag
aattacaagctctactacatggagaagggcatggacactgaacaggacatcgacgtgggg
ggtctctcctacaccttgaccgggctcaagaagttcacggagtacagcttccgggtggtg
gcgtacaaccggcacggaccgggggtgtccacggacgacgtggctgcgcagacgctgtcg
gacgttccaagtgctccacctcagaacctgaccctggaggtacagaactcaaagagcatc
atggtgaggtggcaacccccaccgccaggcacccacaatggggagatcatcagctacaag
atccgctacaggaaggggctgaggaagagcgaggcgaccgagatcacggccggtacgcag
ctcttccagctcattgacggtctggagcgcgggaccgagtacgcgttccgggtgttggcc
atgacggtgaacggcacaggccctgccaccgactggctcactgcggagacctttaagagt
gacctggacgagacacgtgtgccggacatgcccagctcgctgcaggtgcgacccctggtc
aacagcatcgtggtgagctggacccccccggagaaccaggacatcgtggtgcgcggctac
accatcggctacggcatcggcagcccgcacgctcagaccatcaaggtggaccacaagcag
cgctactacagcatcgagaacctggacccgagctcgcactacgtcatcacgctgaaggcc
ttcaacaatgtgggagaggggatcccggtgtacgagagcgccatcaccaggccccagtcg
gaccccgtagaccctgccgttgatttgtacgaactgttccatgctccatacacaccagtt
cccgaccccactcccatgctgccgcccgtgggcgttcaggcctccgtcctgagccacgac
accatcaaggtcacctgggcggacaactcgctgccgaagaaccagaagataaccgacgca
cgctactacacggtccgctggaagaccaacatccccgccaacgccaagtacaagatggcc
aacaccacaaacctgagccacgtggtgacgggtctgaagcccaacaccctgtacgagttc
tccgtcatggtgaccaagggccgccggacgagcacctggagcatgactgcgcacgggacc
accttcgagaccattcccagctcgtctcccaaagacgtcaccgtggtgagcaaggaggaa
aggccgcgcaccatcattgtcaactggcagccccccaccgaggccaacggcaaaatcaca
ggctacatcatctactacagcacggacgtgaacgcggaggtgcacgactgggtcatcgag
cccgtggtgggcaaccggctcacgcaccagatccaggacctcaccctggacacgacgtac
tacttcaagatccaggcgcgcaactccaagggcatgggccccatgtcggaggccgtgcac
ttccgcacccccaaagccgaatcttctgacaaaatggctaatgaccaagcctcgggagga
cccgtgaagccagggagtcgaccccctccgcagaactacggcttcggatctccagtcggt
aaaccaggcatgagcggcagcagtgacaaccacatcctggtcatcgtcatcatcgtgtca
gtgggagccttcaccataatcctggtggtggtgggggcctttctgtgcacgcgccgcacc
acctcccagcagaagaaaaagcgagcggcgtgcaagtccaccaacggctctcacaagtac
aagggcaactcgaaggacctgaagcctccggacctctggatccaccacgagcggctggag
ctcaagcccatggacaagtccccggagccgaacccggtgatgacggacactcccatcccc
cgcacgtcgcaggacatcacgcccatggacggcgcctcggacaaccccatgcatcagaga
cgcaactcgtaccgcggccacgagtctgaggacagcttgtctacgctggccggacgccgg
gggatgaggcccaaaatgatgatgccctttgacacgcagcccccgcagcccgtggttagc
gctcaccccatccattccctcgatacccatcaccaccattatcactcgggcagcccggcc
tcctcggctcgcagcttcctcctccagcagcagggcggcgctcggcccaccgcttccccc
acctcccacctagacagggcccggtcccaagagtcggtgaggaacgcgcccggcgtggac
gccccgccccccccggggccccccggctcctcagccgaccgcgccgagcccgacggcggc
ttcttgagctccggggccgaggacgagccgggctacaacccccccgcggcgcacgtccgc
ccctcgcaccccctgaagagcttcgcggtgcccgcggtgctgccccacaaccccccgttc
gagagccccgccctgcccagcacccctctgctctcccagtcagggctgccccccccgctg
cactcggtgaagacggcggccatcagcaccctgggcaggacccgcccccccttgcccgtc
ctgatgcccagcgccccggacatggcggaggccggaaagatgctggaggacgcggagagc
gcctatgagccggatgagctctcagaggagatggctcacctggagggcttgatgaaggac
ctgaacgccatcaccacagcctga
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