Scleropages formosus (Asian bonytongue): 108934838
Help
Entry
108934838 CDS
T04919
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03083
Polycomb repressive complex
sfm04980
Cobalamin transport and metabolism
sfm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108934838
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
108934838
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108934838
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108934838
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108934838
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108934838
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108934838
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108934838
HMT complexes
COMPASS/SET1 complex
108934838
MLL-HCF complex
108934838
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108934838
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108934838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
108934838
NCBI-ProteinID:
XP_018608504
LinkDB
All DBs
Position
1:9275252..9297387
Genome browser
AA seq
2123 aa
AA seq
DB search
MVDMSSPGSTGSGTTGTVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIV
DELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQAS
RWEWKKLKPKAPKNGPPPCPRLGHSFSLVGSKCYLFGGLANDSEDPKNNIPRYLNDLYIL
ELRPGSGVVGWDIPITYGVLPPPRESHTAVVYTDRANKKSCLVIYGGMSGCRLGDLWTLD
IDSLTWNKPTVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTL
ACLNLDSMTWESVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDL
WYLETERPPAPARVQLVRANTNSLEVNWGTVTTADTYLLQLQKYDIPAATAATSPAVNPT
PSLPSNSPKSPAPAAAAPSSQSLPLTGITLVPQVASPTASLPGSPLAAAAARGPAILKVA
APHSSTGTSIVTVRHASQAGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALA
AAAAATQKIPPSSAPTVLNVPAGATIVKTVPVTAGTTTLPGTVKVASPVMVSNPATRMLK
TAAAQVGTSTVSTPNTPSRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPITMG
SSGTLISNLGKVVSVVQTKPVQTSAVTGQASTSPVTQIIQTKGPLPAGTILKLVTSADGK
PTTIITTTQAGGTGNKPTILGISSVSPTTTTKPGTTTIIKTIPMSAIITQPGATGVTSTP
GIKSPITIITTKMMTAGTGTPGKIITAVPKLGTGPGQQGVTQVVLKGAPGQPGTILRTVP
MGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSIAGANASLATPI
TTLGTIATLSSQVINPAAITVSSAPTSLTTASPLPTPTITMQSVNQPTQVTLITTPSGVE
AQPVQDLPVSILASPTSEQPTVSVAEAGGDVPGTVTLVCSNPPCETHETGTTNTATTASA
NMGVQRVCSNPPCETHETGTTNTATTASANIGVQRVCSNPPCETHETGTTNTATVASASM
GGVQRVCTNPPSETHETGTTNTATTASSNMGSDQIGTVQSQSGSKSPPSSSSSPPPPSSI
PEPSAAPGVLRPENLRTGTTYTSTTAHANMGSDQTGTVQSSQSTPENRRSLSSASCPVSQ
MCSGKEVPVCSSPSCETHETGTTNTATQVASSMGTGQTGAVQRVCSNPPCETHETGTTNT
ATQAASSMGTGQTGAVQRVCSNPPCETHETGTTNTATQAASSMGTGQTGAVQRVCSNPPC
ETHETGTTNTATQAASSMGTGQTGAVQRVCSNPPCETHETGTTNTATQAASSMGTGQTGA
VQRVCSNPPCETHETGTTNTATQAASSMGTGQTGAVQRVCSNPPCETHETGTTNTPSTAS
SNMGASQTGTVQRICSNPPCETHETGTTNTATTATCSMETDEGSVQQSNMPQGDNSADSS
SSPALLPEAANPTASQSRAITTVTQATPAPGPSVPAISSIVDASALPCEEAPTELAQEHL
PQQQDETLAAEQLQAMPVETAAPEEEGEPMQTECQGELGADSVVGVVSMEEEEATSVAVA
VAEAEAAAVLQAEVDQLPMAMETQHSQEEQAEQLEQGVDEAGASHDPEALALPQELMAEG
QPTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSEADAGADGQ
QTTTIPIVLTQQELAALVQQQQQLQEAQAQAQAAAAAAAAAAAAAAAAAQQQANVQAAAL
PTEGLAPADSLNDPTSESNGHNEMAAAVSSAVASLLPCTSAESLAPSSTFAPSQPMVVAS
PVKVQAASSLGEVANGIESAAGKPSPSPAVVKAPVKKENQWYDVGIVKVTNMLVTHYFVP
PDDALATDDDSGAIPDYSQMKKVELQPGTAYKFRVAGINTCGRGAFSEISAFKTCLPGFP
GAPCAIKISKSPDGAHLTWEPPSVTSGKIVEYSVYLAIQSTQSAEAKASSPAQLAFMRVY
CGPSPSCLVQTSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGASAKP
ATKRAVPSSDMKGVGPKKARSDQ
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatatgtcttcacctggttccacgggatccgggaccacgggcacggttctgcag
cctcgatggaagcgggtgctgggctggtccggccccgttcctcgaccgcgacacggccac
cgagctgtcgctatcaaggagctaatggtagttttcgggggaggaaatgaaggaatcgtg
gatgagttgcacgtatacaacacagccactaaccagtggtttataccagccgttcgtggt
gacattccacctggctgtgctgcctatggttttgtgtgcgatggcacacgcctgctggtc
tttggcggcatggtggaatatggcaagtacagcaatgacctgtatgagctgcaggccagc
cgatgggagtggaagaagctgaagccgaaagctccaaagaatggcccccctccttgccct
cgcctgggccacagcttctccttggttggaagcaagtgctatctgtttgggggactggct
aatgacagcgaagatcccaagaacaacattcccaggtacctgaatgacttgtacatcctg
gagctgcgtcctggctccggagttgttgggtgggacatccccatcacatatggtgtgctg
ccgccccctcgcgagagccacacggctgtggtctacactgatagagccaacaagaagtct
tgcctggttatctatggaggcatgagcgggtgccgcttgggagacctgtggacccttgac
atcgactccctgacctggaacaagcctaccgtgaatggcacagctccgctgccacgcagc
ctccattcagccactaccatcactaacaagatgtatgtgtttggagggtgggtgcccctg
gtcatggatgacgtgaaagtggcaacacatgagaaggagtggaagtgcacaaacactctg
gcctgcctcaatttggactccatgacatgggaatcagtgttgatggacactctagaggac
aacattccaagagcccgagcaggacactgtgctgttgccatcaactcgcgcctctatgtc
tggagtggtcgtgatggctaccgcaaagcctggaacaaccaagtctgttgcaaagacctt
tggtacttggagacagagagaccaccagccccagcaagagtccagctggttcgtgccaac
acaaactccctggaagtgaattggggcacagtgaccacagctgacacatacctgttgcag
ctgcagaagtatgacatccctgctgccacagctgcaacttcaccagctgtcaaccccaca
ccctcactgcccagcaactctccgaagagccctgctcctgcagcagcggccccttcctca
cagagcctgcccctcactggcatcacacttgtgccccaggtggcctcacccaccgcctct
ctgcctggtagcccactggctgccgctgcggcccgtggaccagccatcctgaaggtagca
gcaccccattccagcactgggacctctattgtcactgtgcggcatgccagtcaagctgga
aaatctcccgtcactgtgacctcacttccggctggtgtccgaatggttgttcctgcacag
agcactcaaggaacgccaattggaagcagtccccaaatgagtggaatggcagctcttgct
gctgctgctgcagccacacagaagattcccccatcatcggcccccactgtactcaatgtg
cctgctggtgccaccattgtcaaaacggtgccagttactgctggtaccactaccctgccg
ggcactgtcaaagtggcatcgcctgttatggttagtaaccctgccacccgcatgcttaag
acggcagcagcccaagtgggaacatcaacagtttccacgcccaatacaccctcgcggccc
atcattaccgtgcacaagtctggcactgtcactgttgctcagcaagcccaagtagtcacg
actgtggtgggtggtgtcaccaagaccatcactctcgtcaagagtcccatcacgatggga
agtagcggtacactgatctccaatctggggaaggtggtgtctgttgtgcagaccaagcca
gtgcagacctctgctgtgacaggtcaagcttccaccagcccggtcactcagatcatacag
acaaagggtcctctccctgctggcaccatcctcaagctggtaacttcagcagatggaaag
cccaccaccatcattactaccacccaggcagggggcactggcaacaagcccaccatcctg
gggatcagcagtgtgtcacctacaaccaccaccaagccaggcaccaccaccattatcaag
accatccccatgtcagctatcataacccagcctggagccacaggagtgactagcacccca
gggatcaagtcgcccatcacaattatcactactaagatgatgacggctggcacaggaaca
cctggaaaaatcatcacggctgtgcccaagttgggtacaggacctggccaacagggggtg
acacaggtagttctgaagggggcaccaggtcagccaggcactattctccgcacagtgcct
atgggtggggtccgtctggttacccctgtcactgtgtctgctgtcaagccaaccgtgacc
acacttgtcgtcaagggaacaactggtgttaccactcttgggactgtgacaggaacagtt
tccaccagtcttgcaggaggcagcattgccggtgctaatgcctccctagcaactcccatc
accaccctgggcaccattgcaaccctgtccagtcaagtgatcaatcctgctgccatcact
gtctccagtgccccaaccagcttgactacagcgtcacctttgcccactccgaccatcacc
atgcagtctgtgaaccagccgacccaggtgaccctgataaccacccccagtggtgtagaa
gctcagccggtgcaggacttgccagtgtccatccttgcctcacccacctccgagcaacct
actgttagtgtggctgaggcagggggtgatgtgcccgggactgtaacattggtttgttca
aacccgccgtgtgagacccacgagaccgggaccaccaacacagcaaccacagcctcagca
aacatgggagtccaacgcgtgtgctcaaaccctccgtgtgagacccatgaaaccgggacc
accaacacagccaccaccgcttctgccaatataggagtgcagcgcgtgtgctcaaaccct
ccttgcgagacccatgagaccgggaccaccaacacagccactgtggcctctgcaagcatg
ggcggagtacagcgagtgtgcaccaacccaccatcggagactcatgaaactggcaccacc
aacaccgccaccaccgccagctccaacatgggctctgaccagataggcaccgtccagagc
cagtctggttcaaagtctccgccctctagctcctcttctccgccacctccctcctccatt
ccagagcccagcgctgcccctggcgtcctgcggccagagaacctgcgcaccggcaccaca
tacacctccaccacagcgcatgccaacatgggctctgaccagacgggcactgtgcagagc
tcacagtccaccccagagaaccgtagatccctcagcagtgcctcttgtcctgtctcccag
atgtgctcagggaaagaagttccagtctgctccagtccatcctgtgagacccacgagaca
ggcaccaccaacacagctacccaggtagcttccagcatgggcactgggcagactggggcg
gtgcagagagtgtgttccaatccaccctgtgagacccatgagacaggcaccaccaacaca
gctacccaggcagcttccagcatgggcactgggcagactggggcggtgcagagagtgtgt
tccaatccaccctgtgagactcatgagacaggcaccaccaacacagctacccaggcagct
tccagcatgggcactgggcagactggggcggtgcagagagtgtgttccaatccaccctgt
gagacccatgagacaggcaccaccaacacagctactcaggcagcttccagcatgggcact
gggcagactggggcggtgcagagagtgtgttccaatccaccctgtgagactcatgagaca
ggcaccaccaacacagctactcaggcagcttccagcatgggcactgggcagactggggcg
gtgcagagagtgtgttccaatccaccctgtgagactcatgagacaggcaccaccaacaca
gctactcaggcagcttccagcatgggcactgggcagactggggcggtacagagagtgtgt
tccaacccaccctgtgagactcatgagacgggcaccaccaacacaccatcaacagcctcc
tctaacatgggtgccagccagacgggcactgtgcagaggatctgctccaatccgccctgt
gagacccacgagaccgggaccaccaacacagctaccacagccacgtgcagcatggagact
gatgaaggttcagttcagcagagcaatatgccacagggagacaacagcgcagactcttct
tcctctcctgctctcttgcctgaagcagctaatcccactgcgtcgcagagccgagccatt
accactgtgactcaggcaacaccagcgccaggaccttcagtgcctgcaatctcttcaatc
gtggatgcctcagctctaccgtgtgaagaggctccgactgagctggcccaggagcacctg
ccacagcagcaggatgaaaccttggctgctgagcagctccaggcgatgcctgtggaaact
gctgctccggaggaagagggtgagccgatgcagacagagtgccagggggagctgggagcg
gattctgtcgtaggggtggtgtccatggaggaggaggaagccaccagtgtcgcggtggct
gtagcagaagcggaagcagcagctgtgttacaggcagaggtggatcagttaccaatggcc
atggagacacagcacagtcaagaagaacaagcagagcagttggagcaaggagttgatgag
gcaggagcatcccatgacccagaagccctagcgctgccccaggagctcatggcagagggg
cagcccaccaccctaatggtaacaggccttactccggaggagttagcagttactgcagct
gcagaggcagctgctcaagcagcagccacagaggaagcccaggccctggccatccaggcc
gtcctgcaggctgcacagcaggctgtcatgagtgaggctgatgcaggtgctgatggtcag
cagaccaccacaattcccatagtgctcacacagcaggagctggctgctttggtccagcag
cagcagcagttgcaggaagcccaagcacaagcccaagcagccgccgctgccgccgccgct
gctgctgccgcagccgcagctgctgcccaacagcaggctaacgtccaggccgctgccctg
cccacagagggtttggcccctgctgacagcctcaacgatcccacatctgagagtaatggg
cacaatgagatggctgctgcagtttccagtgccgtggccagcctgctgccctgcacctct
gctgagagtctggccccatcaagtacctttgcaccctcgcagcccatggttgttgccagc
cctgttaaagtgcaggcagcatcttctctgggcgaggtggctaatggcattgaatctgca
gcagggaagccgagtccctcacctgctgttgtcaaggcccctgtgaaaaaggaaaaccag
tggtatgatgttggtattgtgaaggtcacaaacatgttagtaacccactactttgtgcca
ccggatgatgcacttgctactgatgatgactcgggggccatcccagactacagccagatg
aagaaggtggagctacagccaggcaccgcctacaagttccgcgtagcagggatcaacacg
tgtggtcgtggggccttctctgaaatctctgcctttaagacctgcctacctggcttccca
ggggccccctgtgccatcaagatcagcaagagcccagatggtgcccacctgacgtgggag
cccccctcggtgacctcggggaagatcgttgagtactcggtatacctggcgatccagagc
acccaatctgcagaggccaaagcttcgtcgcctgcccagctggccttcatgcgagtctac
tgtgggcccagcccctcatgtctggtgcagacttccagtctgtccaatgcccacattgac
tacaccaccaagccagccatcatcttccgcattgctgcacgcaatgagaagggctatggc
ccagccacacaggtccggtggctgcaagaatccagcaaagatggtgcttctgctaaacct
gcaacaaaaagggctgtgccctcatctgacatgaagggtgttggcccaaagaaggccagg
tcagaccagtga
DBGET
integrated database retrieval system
