Scleropages formosus (Asian bonytongue): 108934855
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Entry
108934855 CDS
T04919
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108934855 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108934855 (nup54)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108934855 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
108934855
NCBI-ProteinID:
XP_018608541
UniProt:
A0A8C9SG62
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Position
6:complement(26921556..26933126)
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AA seq
597 aa
AA seq
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MAFNFGGSTTNPGGSSGFSFGSFTAKTTASTGFVFGGGTTTTAASSGFGSLATGFGTTTT
SAPSTGFGFGSTATGFGGLGAASTTTGAFGGFGAATTSAAPGSTFSFAAPSNTGGLFSSN
QNKGFGFSSGLGTGTTTGTGFGTGFGTGLGTGLGTGLGTGLGTGLGTGLGTGLGTGLGFG
GFNVQPQQQQGGLFGPQAQAPSQSNQLIHTASALSAPTLLGDERDAILAKWNQLQAFWGT
GKGYFNNNIAPVDFTQENPFCRFKAVGYSCIPGSKDEDGLVVLALNKKEADVRSQQQQLV
ESLHKVLGGQQTLTVNVEGVKALPDDQTEVIIYVVERSPNGMSKRIPATTLFAYMEQVNI
KSQLQQLGVIMTVTRTELSPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGF
KELLRRLKIQEQMTKQHQTRLDIISNDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVL
IKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSE
ERYSIDADLLREIKQHLKQQQEGLSHLISVIKEDMEDIKLVEHGLQDGLHMRGGMLS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaactttggcggcagcaccactaatcctgggggctcttctggattttcattt
ggttcatttaccgccaaaacaacagcctctaccggttttgtttttggcggcggcaccacc
accactgccgcctcatctggatttggtagtctcgccacagggtttggaaccaccactaca
tcagcaccctccactggctttggctttggttctacagctacaggatttggggggctggga
gctgccagcaccaccaccggtgcctttggcggatttggagcagctaccacatcagcagca
cctggatcaactttcagctttgctgctccttcaaacacagggggtctctttagcagcaac
cagaataaaggttttggcttttcttcgggcttgggaactgggacgactacgggaactggc
tttggcactggctttggaactggtctcggcacaggtcttggtactggacttggcactggc
cttggaactggcctcggcacaggtcttggcactgggcttggtactggccttggttttggg
ggcttcaacgttcagccccagcaacaacagggaggcttgtttggtccacaggctcaggct
ccttcgcagtctaatcagctgatccacacagccagtgccctctctgcacccacgctcctt
ggcgatgagcgtgatgctatcttggccaagtggaaccagctccaggccttctggggcact
ggcaagggctacttcaacaacaacattgcccctgttgattttacccaagaaaaccccttc
tgcaggttcaaggctgtaggttatagctgcatcccaggcagtaaagatgaggacggcctg
gtagtccttgccctgaacaagaaggaggccgatgtccgcagtcagcagcagcagctggtt
gaatctctccacaaagtgctgggtggacagcaaactctcacagtgaatgttgagggagta
aaagcactcccagatgaccaaacagaagtgataatatatgtagtggaacggtccccaaac
ggcatgtccaagaggattccggctactacgctcttcgcttacatggaacaggttaacatc
aagagccagttacagcagctgggtgtgatcatgacagtcacccgcacagagctgtcacct
gctcagctgaaacagcttctgcaaaatccacctgctggtgtggacccaatcatttgggag
caggctaaagttgacaacccagatccagagaagttgattccagtaccaatggttggtttc
aaggagcttctacgcagattgaagattcaggaacagatgaccaaacaacaccagactagg
cttgatataatctccaatgacataagtgagttacagaagaaccaagcaacaacagtggcc
aagattgcccagtacaagaggaagctgatggatttgtctcacagagtgcttcaagtgttg
atcaagcaggagattcagaggaagagtggctatgccatccaagtggatgaggaacacctg
cgggtgcagttggacaccatacagtctgaacttaacgcccccactcaattcaaggggcga
ctgaatgagctcatgtctcagatacgtatgcagaatcattttggggcagtccgctccgag
gagcgctacagcattgatgcagacctattgcgggagatcaaacaacatctgaaacagcag
caggagggcctgagccatctgatcagcgtgatcaaggaggacatggaagatattaagctg
gtcgagcatggcctccaggatggcttgcacatgaggggtggcatgctcagctga
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