Scleropages formosus (Asian bonytongue): 108934875
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Entry
108934875 CDS
T04919
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfm03009
]
108934875 (ddx56)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108934875 (ddx56)
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
Pre-60S particles
Helicases
108934875 (ddx56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108934875
NCBI-ProteinID:
XP_018608563
UniProt:
A0A8C9RW40
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Position
6:34742323..34748272
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AA seq
558 aa
AA seq
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MAADRLRFHEMGLDNRLMKALADLGWAQPTLIQEKAIPLALDGKDILARARTGSGKTAAY
AVPLIQRILASKETVCEQAVRALVLVPTKELGHQVHTMFRQLTAYCARDVRVADISGKAD
LSAQRPILMEKPDVVVGTPSRVLAHLAARNVTLSASLEALVIDEADLLFSFGFESDLKGL
LCHLPKIYQAFLMSATLNEDVEALKELVLHNPVTLKLQGSQLPDSSQLQQYSIQCEEEDK
FLLVYTLLKLGLVRSKTLVFVDAVDRCYRLKLFLEQFSIPACVLNSELPVQSRCHIIMQF
NQGFYNYIIATDEHTVADPTVTVLQGKKRGTASRGRGKDEEYGVSRGVDFHNVSNVINFD
FPKTVESYIHRVGRTARAGNPGTALTFVSHTELDLLAQIQDALAGDNSESALKPYGFKME
EIEGFRYRCRDAMRSVTKQAIKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKDLH
PAIIKPHLKNVPEYLIPSALKHVVNPLLGRKKRKQVKPSLQVVLKAKFKGSRRGSNPLKS
FRHVGKKGKDRRRDAGKS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgacaggctgcggttccacgagatgggcctggacaaccgcctgatgaaggcg
ctggcggacttaggatgggcgcagcccacgctcatccaggagaaggcgattcctctcgcc
ctcgacgggaaggatatcttggccagggctcggaccggctccgggaaaacggctgcgtac
gcggtgccgctgatccagcgcatcctcgcgtccaaagagacggtgtgcgagcaggcggtg
cgagcgctggtcctcgtgcccaccaaggaactcggtcaccaggtgcacaccatgttccgc
cagctgaccgcttactgcgccagggacgtgagggtggcggacatctcggggaaggccgac
ctttccgcgcagaggcccatcctgatggagaagccggacgtggtggtcgggacgccgtct
cgtgtgctggcccacctcgccgctcgcaatgtgacgctgagcgcgtcgctcgaggccctg
gtcatcgacgaggccgacctgctcttctccttcggcttcgagagcgacctaaagggcctg
ttgtgccacctccccaagatctaccaggcttttctgatgtcggccaccttgaacgaggac
gtggaagccctgaaggagctcgtgttgcacaacccggtgacgctgaagttgcagggctcc
cagctccccgacagctctcagctgcagcagtacagcatccagtgtgaggaggaggacaag
ttcctgctcgtctacacgctgctgaagctgggtctcgtacgcagcaagacgctcgtgttc
gtggacgccgtggaccgttgctaccgcctcaagctcttcctggagcagttcagcatccca
gcctgcgtgctgaactcggagctgcccgtgcagtccaggtgtcacatcattatgcagttt
aaccagggtttctacaactacatcatcgccactgacgagcacacggtcgccgaccccact
gtgactgtgctgcagggcaagaagagggggaccgcttccagagggagagggaaagacgag
gagtacggcgtgtccagaggcgtcgacttccacaacgtgtccaacgtcattaacttcgac
ttccccaaaacggtcgagtcctacatccaccgcgtgggcagaaccgcacgagcggggaac
cccggcacggcgctcaccttcgtctcgcacacggagctcgatctgctggcgcagatccag
gacgcgctcgcaggagacaattcggagagcgccttgaagccgtacgggtttaagatggag
gagattgagggattcaggtaccgctgtcgggacgcgatgaggtcggttacgaaacaagcc
atcaaggaagcccggctcaaggagatcaagcaggagctgctcaattctgagaagctcaag
acctactttgaagacaacccccgtgacctgcagctgctgcgccacgacaaggacctgcat
cctgccatcatcaagccgcacttgaaaaacgtgccagaatatctcatcccttctgcactc
aagcatgtggtgaacccgctccttgggcgaaagaagcgcaagcaggtgaaaccttcactg
caggttgtgttgaaagcaaagttcaaggggtctcgcaggggcagcaatccactgaagagc
ttccggcatgtcggaaagaaaggcaaagacaggcgcagggatgccgggaagtcctaa
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