Scleropages formosus (Asian bonytongue): 108934893
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Entry
108934893 CDS
T04919
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108934893
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108934893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108934893
Transcription factors [BR:
sfm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108934893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
108934893
NCBI-ProteinID:
XP_018608608
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All DBs
Position
3:complement(3933531..3952608)
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AA seq
945 aa
AA seq
DB search
MLHFECGWMSLLICLRERPGEDIIRAFLYTDVVTVSGNIFMVVASLFRMETMEYNLDMVD
TEIMMHEMTDFMYQPISSSSVKVEPYLETVHGPYLQIIEEPKQRGFRFRYECEGPSHGGL
PGASSEKNKKTYPTVKVGNHLGRAKVEVQLVTHTDPPRIHAHSLVGKHCNDSGTCSVIVG
PNDLTAQFNNLGILHVTKRGVVEVLTKRLKEEKMKQRGTRNHFTDTEEQTIVKEAKELSK
TMDLNVVRLKFTAYLQDSQGGYTLALKPAISKPIYDSKSPNASNLKISRMDKTCGSVLGG
DEIFLLCDKVQKDDIEIRFYEEEDGCWEALGDFSPTDVHKQYAIVFKTPKYHTIEIERPV
TVFLQLKRKKGGDCSEPKQFTYVPHIQDKEEVKRKRQKPLPHMYDQWRGPPGGSGGAGSG
AGGPGGGVGGGDTLFPFGQLDMGGCFSQFARGSGFGGGGAQMSESSEAQQVQESERRSIG
PPRAGSPRQRQLLQIASALQGRATLTARRMARALLDYCSTGDVRLLLAVQRHLCAVRDEN
GDTPLHLAIIHQQLPVIEQLVHAIVSMHQQKLLDTRNHLGQTPLHLAVITRQPKVVDFLM
RAGADPSLFDRDGRSAVHLAATLGDEHTLRAVLACLAEQHAYLVNTADNSGFLPLHLAVR
KGGERCLRALVEGGARVDAVELKSGCTALHVAVKENLFKVAFLLITELKADVNAVTFAGN
APLHLAACLGSPTLCSMLIAAGAQKDAENDEPLFISSSSDEEHEEVELSSTKQQATPSQW
SEKPCKRHAAGHTPFDLAKCQRVRDLLDYRKSPTPTRPVADTPKTHEEADGPQLDSDTLQ
QLCGILSEGHVPWRQLAQKLGMLTLADLFQETASPCRSLLESYQVAGGRIEGLVEALESL
GLNNGVRLLRQRELKDKTHAADSTVDSGFGSQTMEDMERPVLADS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttacatttcgagtgtggttggatgtctttgctaatatgtctccgggagagacctgga
gaggacattataagagcatttctttacacagacgttgtgacggtgtctggaaatatattc
atggtcgttgcatctctttttaggatggagacaatggagtacaacttggacatggtggac
actgagattatgatgcatgagatgactgacttcatgtaccagcccatctcttcatccagc
gtgaaggtggagccatacctggagacagttcacgggccatacttgcagatcatcgaggag
cccaagcagaggggtttccgatttcggtacgaatgtgaggggccttcccatgggggtctg
ccaggggcctccagtgagaagaacaagaagacataccctacggtgaaagtaggcaaccac
ttaggccgcgcaaaagtggaagtgcagctcgtgacccacacggatcccccgcgaatccac
gcccacagtctggtgggcaagcactgtaatgacagcggcacctgcagcgtcatcgtagga
cccaacgacctcacggcgcagtttaacaacctgggcattctccatgtgaccaagcgaggg
gtggtggaggtcctgactaagaggctgaaggaggagaagatgaaacagagagggaccagg
aaccacttcacagatacggaagagcagaccattgtgaaggaggccaaggagctgagcaag
accatggacctgaatgtagtgaggctgaagttcactgcatacttgcaggacagccagggg
ggctacactttggctctgaagcccgccatatccaagcccatatacgacagcaaatcacca
aatgcctcaaacctaaagatctcgcgcatggacaagacctgtggctcagtacttgggggt
gacgagatcttcctgctgtgtgacaaggtgcagaaagatgatattgagattcgcttctat
gaagaagaagatggatgttgggaggctctgggagacttttcccccactgatgtccataag
cagtatgccattgtgtttaaaacaccaaagtaccacaccatagagatcgagaggcccgtc
actgtgttcctgcagctgaagaggaagaagggtggagattgcagcgagcccaagcagttc
acctacgtcccacacatccaagacaaagaggaggtgaaacgcaaaaggcagaagcccctt
ccgcacatgtacgaccagtggcgcgggcccccagggggctctggcggagcaggaagtgga
gctggaggacccggaggaggtgttggaggaggtgacacgttgttcccgttcggccaactg
gacatgggaggatgcttcagccagtttgccaggggcagcgggttcggagggggcggggcc
cagatgtctgaatcgtcagaggcccagcaggtccaggagagcgagcggcggtccatagga
ccacctcgggctgggtcgccacggcagcgacagctgctccagattgcctctgccctgcag
ggtcgagccacgctgaccgcccgacgcatggcaagggccctgcttgactactgcagcact
ggtgatgtgcgcctcctgctggccgtgcagaggcacttgtgtgctgtccgggatgagaac
ggagacacgcctctgcacctggccatcattcaccagcagctacctgtcatagagcagcta
gtccacgctattgtcagcatgcaccagcagaaattgctggatacgcgcaaccatctgggc
cagactcctctgcacctggctgtcatcacccggcaacccaaggtggtggacttcttgatg
agggcaggggctgacccaagcctctttgaccgagacggccggtctgcggtgcacttggct
gcgacccttggagacgagcacacgctccgtgccgttctggcctgcctggcagagcagcac
gcctacttggtgaacacggcagacaacagtgggttcctacctcttcacctggctgtacgg
aagggaggcgaacggtgtctgcgggccctggtggaaggtggggcacgggtagacgccgtg
gagctgaagagcggttgcactgcgctgcatgtcgccgtgaaggagaacctcttcaaagtg
gctttcttgcttatcaccgagttgaaggcagacgtgaacgcggtgaccttcgcgggaaac
gcaccgctccacctggccgcatgcctcggctcacccacgctgtgctcgatgctcatcgcg
gcaggtgctcagaaggatgcagagaatgacgagccacttttcatcagctcatcctcggat
gaagagcacgaggaagttgaactgagttccaccaaacagcaggctacaccctcccagtgg
tctgaaaagccctgcaagaggcatgctgcaggccatacgcctttcgacctggccaaatgc
caacgggttagggatctgctggactacaggaagagccctaccccaaccagaccagtggca
gacaccccaaagacacacgaagaggcagatggaccccagctggacagcgacacactccag
cagctgtgtgggatcctcagtgaaggtcacgtcccttggaggcagctggcccagaagctg
ggcatgttgacgttggctgacctgttccaggaaaccgcatcaccctgccggagcctgctg
gagagctaccaggtggccggtgggcggatcgagggcctggtggaggcactagagtcgctg
ggtttgaacaacggtgtgaggctgctgagacagagggagctaaaggacaagacacacgca
gcagattcaacagtggacagcggctttgggagtcagactatggaggacatggagagaccg
gtactggcagattcctga
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