Scleropages formosus (Asian bonytongue): 108935216
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Entry
108935216 CDS
T04919
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108935216 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108935216 (smg7)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108935216 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
108935216 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
108935216
NCBI-ProteinID:
XP_018609154
UniProt:
A0A8C9S3U1
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All DBs
Position
3:13914681..13940404
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AA seq
1172 aa
AA seq
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MNLCAQYLRQAEALKADMTDSKLGPADIWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRGNPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSRLGIISNKQNNTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLSRSLEKLSSLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDYSSEADEQNFSPDEQISWIQLLALFMSFLGIMCSRALLSKNHEEVLGECPL
PAIKVSLDWLKLRPRVFNESAVDKRQYVWSWLVAILNSFQPREDDVTCTPVMPLPEEFEL
QGFLALRPALRALDFSKGHQGIIGDKGLPTRARHQRLISLGKWVADNQPRLIQYRIEDGV
LQFITDIPQMIIEEPQDKDGLVLQESSNSDPPSSEGSMGLKSVLSVGKSHGGGPEGGERP
VVTFKENIKPREHSRELARNLHQKEGSKDRRDYSKGNGTPCKNEQKKDNKRKNESKKNSH
EKTPDSGKQAKGQSEMTKVPVSESRKTPVTQTQTTSSSQFIPIHHPGAFPPLPSRPGFPP
PAYVIPPPVAFSMNPGFTFSTGVSVPGPFLQPASHTQTGTQIPAGKQSHIPYSQQRPSGP
GAINQGPQQQQQGQQPLQPSAQLQVQALSQQQQQQQQQSPTKPMAAQQGKSPPHHPGMQQ
YMQVSEQSGQLWNQHQPQPSLQKMPLPVKQPFFMSPQDPMKLFEHQVQAVPMQPPQSIST
DKKVKYPEVKAQDFYWESPYRMADNQPMMSHQVTNERLIKRQPVFCPEKDCVPRLSSFED
NKSSPLLPPDLLKSLADFEEEEELAFTKPHDFYQALAGPLSTAPGRNIFLPNLSRLDRAP
EVISQSSSLLPLSGFSAQENSYQNSSIFSEAYGKNMTPNPKPDIPLAHQEASLYSLFEGT
PWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHSHGSIPFSNFGPIGTSDSRDRRMTD
RWKAEKTVGGFGLDYLPAVSSSENSWHQASAPSSTWAAQESPMEDSSTVLLDSLKSIWSS
SMMHPGPSALEQLLMQQKQKQQRGHGTMNPPH
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtgcgcccagtatttaaggcaagcagaggccctgaaggctgacatgacagat
tcaaagctgggtccagcagatatctggacatcaaggcaagctctgcaggacctttaccag
aagatgttggtgacagacctggagtatgctttagacaaaaaagtggaacaagacctctgg
aaccatgcatttaagaatcaaataacaacactacagagtcaagccaagaatagaggtaac
cctaacagaagtgaagttcaggccaacttatccctgtttcttgaggcagctagtggattc
tacacacaactgttgcaggaattgtgcacagtgttcaatgtggacttgccttgtcgggtc
aagtcatctcgactgggaataatcagcaataaacagaataacaccagcgccattgtaaaa
ccccaaccaagctcttgctcatatatttgccagcattgtcttgtgcaccttggagacatt
gcacggtatcgcaatcaaaccagccaggcagagtcctattatagacatgcggctcaactt
gtaccttcaaatgggcaaccttataatcaactggctatattggcctcctctaaaggtgac
cacctcacaacgattttctactactgcaggagcattgctgtcaagtttccttttcctgca
gcttccacaaacttgcagaaagcactctccaaagctctggaaagccgtgatgaggttaaa
accaaatggagtgtttctgatttcatcaaggccttcattaagtttcatggccatgtgtac
ttgagtaggagtcttgagaagctcagtagtctaagggagaagctggaagaacaatttcag
aggttaattcttcagaaggccttcagctctcagcagctggtacatattacggtcattaat
ctgtttgaactccaccatctgagggactacagtagtgaggcagatgaacaaaacttcagc
ccggatgaacagatcagctggatccaactgctagccctcttcatgtcatttttgggcatc
atgtgcagcagggctttgctcagtaagaaccatgaggaggtccttggcgagtgccctctt
ccagccatcaaggtttctttagactggttaaaactgcggccacgagtcttcaatgagagc
gcagtggacaaaagacagtatgtttggtcatggctggttgcaatcctgaacagcttccag
ccaagggaagatgatgtgacttgtactccagtgatgcccttaccagaggaatttgagctg
caggggtttctggctctcaggcccgctttacgagcacttgatttttcaaaagggcatcag
ggcatcattggtgataaaggtctgcctacccgagctcgtcatcagagactcatcagtcta
ggaaagtgggtagctgacaatcagccgaggttgatacaataccgcattgaagatggtgtt
ctccagttcataactgacataccacaaatgataattgaagagccccaggataaagatggc
ctcgtgctccaggaatcctccaacagtgaccctccatctagtgagggcagcatggggctc
aagtctgtgctttcagtgggcaaatcccacggtggcggtccagagggtggtgagaggcca
gtggttacattcaaggagaatatcaagccacgtgagcatagccgggaactggcccgcaat
ctccaccagaaagaggggagcaaggataggagggactacagtaagggcaacggcaccccc
tgcaagaatgaacagaagaaagacaacaaaagaaagaatgagtctaagaaaaacagccac
gagaagactccagattcaggaaaacaggcaaaaggccagtctgagatgacaaaggtgcca
gtatcggagtccagaaagactccagtgacacagactcagaccactagttcctcccagttc
atccccatccatcacccaggagccttccctccacttcccagcaggcctggattcccccct
ccggcttatgttataccccctcctgtggccttctccatgaacccaggcttcacgttctct
actggggtgtctgttcctggaccctttctacaacctgcctcccacactcagacaggcacc
cagataccagctgggaaacagtcacacattccttacagtcagcaaaggccctcggggcca
ggagccattaaccaaggtccccagcagcaacaacaaggacagcagccattgcagccatcc
gcacagctgcaggtgcaggctttgtctcagcagcagcaacagcagcagcagcaatctccc
acaaaacccatggcagcccagcaaggcaaaagtccccctcaccatccaggcatgcagcag
tacatgcaggtcagtgagcagtcaggccagctgtggaaccaacaccagccccagccatca
ctgcagaagatgccgctgcctgtgaagcaacccttcttcatgtcaccccaggacccaatg
aagctctttgaacatcaggtgcaggcagtgcccatgcagcctccacagtccatcagcacg
gacaagaaggtcaaatatccagaagtcaaagcacaggatttctactgggaatctccttat
cgtatggcagacaaccaacctatgatgagtcatcaagtgaccaatgagcggctcatcaag
cgtcagccggtcttttgccctgaaaaggattgtgtgcccaggttgtcatcttttgaggac
aacaagagctcccctcttctacctcctgacctgttaaaaagtctagctgattttgaggag
gaggaagagctggcctttactaagccgcatgatttctaccaggctttggctggcccactt
agcactgctcctggacgaaacatatttttgccaaacttgtcaagactggacagagcacct
gaggttatttcacagtcatcttcccttctgcccttgtctggattttcagctcaggagaat
tcctatcaaaacagcagcatttttagtgaagcctatgggaaaaacatgaccccaaatccc
aaaccagatattcccttggcacaccaggaggcttcactctattccctgtttgaaggcact
ccgtggtctccttctcttcctgccagctcagaccactcaacaccagcaagccagtctccc
cactcctcaaatcccagcagtttgccctcatctccacccacacacagtcatggctctatc
cccttctctaactttggacccattgggacctctgacagccgagacaggaggatgacagac
cgctggaaggcagagaaaacggttgggggcttcggtttggactacttgcccgctgtgtct
tcgtctgagaacagttggcaccaagcaagtgctcccagcagcacctgggcagcgcaggag
tcacccatggaggactcctctacagtcctcttggacagtcttaagtcaatctggtccagc
tccatgatgcatccaggcccctcagccctggaacagctgctcatgcaacagaagcagaag
caacagaggggacacggcaccatgaacccaccgcactga
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