Scleropages formosus (Asian bonytongue): 108935239
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Entry
108935239 CDS
T04919
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108935239 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108935239 (u2surp)
Spliceosome [BR:
sfm03041
]
Complex A
U2 snRNP components
U2 related factors
108935239 (u2surp)
Complex B
108935239 (u2surp)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
108935239
NCBI-ProteinID:
XP_018609209
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Position
3:complement(18987181..18999136)
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AA seq
951 aa
AA seq
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MADKTPGTQKASAKALLESKLKAFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEEF
LAAFEGGEGKVKTFVRGGIANATKEEAEADEKRGKLYKPKSRFAEMKPTLPMETPPQYLS
VDKKNVKRGEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSHVEGRRSFLDD
SAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTNEERARERNC
GFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMVEHALPPPPSG
LPFNAQPRERLKNPNATLLPPPTNKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVR
EGPMFEAMIMNREINNPMFRFLFENQSPAHVYYRWKLFSILQGDSPTKWRTEDFPMFKNG
SLWRPPPLNPYLHGTLDENEDSEEEEEASKKGCLKEDERDKLEELLRGLTPRKSDIADAM
FFCLSHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVSNASYYRKFFE
TKLCQIFADLHATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPFLIKLQNLFLGLVN
LGPDQESSAPVVEPEPTDDIDGAPIIEEELDGAPLEDVDGAPIDGAPLDDLDGVPIKPPE
DDLDGVPLDASGLKPAFKVAPSKWEAVDGSTLEAQAVTTSKWEIFDQPEEASQGQQVETE
QNEDDEDSRSSHSAEQRSYSNPVRDDDSDPRSAKYSEMSEEKRAKLREIELKVMKFQDEL
ESGKRPKKSGQSIQEQVEHYRDKLLQREKEIEREREKEKEKDKKEKEKTDVRSKDKKEKE
DSPTSKKEKKRRHSASPSPTRSSGRRARSPSPRSERSDRSSRKGDSRSRSSHRDSPKETN
RKSSKRSPSSPRTPKRSRRSRSRTPKKSGKKSRSRSRSPHRSHKKSKKSKH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccagggacgcagaaagccagcgcgaaggcgctgctggagagcaag
ctgaaggccttcagtattggtaaaatggctgttgctaaaagaacactcagcaagaaagag
caagatgaaattaaaaaaaaggaggatgagcgagcagcagctgagatatatgaagagttc
ctggctgcttttgaaggaggagaaggcaaagtcaagacttttgtcagaggtggaattgct
aatgcaacaaaagaagaggctgaagctgatgagaagagaggaaagctctacaaaccaaag
tcacgatttgcggagatgaaacctactctgccaatggaaactcctccacaatatttatca
gttgataaaaagaatgtaaagaggggggagaaggagaagaaaaaaagcaacctggaactc
tttaaagaagaactgaagcagatacaggaggagcgagatgaacgacacaagatgaaaggc
agagtgagccgatttgaacctctttcccatgtggaaggaaggcgatccttcttggatgat
tcggcccccggctcacatgatgtaggagatccttctacaactaatttataccttgggaac
attaacccacagatgaacgaggagatgctgtgccaagagtttggtcgatatggccccctg
gctagcgtgaagatcatgtggcccagaaccaatgaggagagagcacgggagaggaactgt
ggcttcgtggctttcatgacaaggagagatgctgagcgagcattgaagcatctgaacggc
aagatgatcatgaattttgagatgaagctgggctggggcaagggcgtgcctatccctcca
caccctatctacatcccaccctccatggtggagcacgcgctaccgccacccccttcagga
ctgcccttcaacgcacagccccgggagaggctaaagaaccccaatgccacgctgctaccg
ccccctaccaacaaggaggagtttgaaaagactctgtcgcaagccatagtcaaagtggta
atcccaacagaaaggaatttgctttctctcatccaccgaatgatcgagtttgtggtgcgt
gaaggtcccatgtttgaggccatgatcatgaaccgtgagatcaacaacccgatgttcagg
tttttgtttgagaaccaaagtcccgctcatgtgtactacagatggaagctcttttccata
ctacagggagattctcctaccaagtggaggacagaggatttccccatgttcaagaatggg
tctttgtggcgtcccccacccctgaacccttacctgcatgggacactggatgagaatgag
gacagtgaggaagaggaggaggcctccaagaaggggtgtttgaaagaggatgaaagggac
aaactagaagagctcctgaggggcctgacacccaggaaaagtgacattgcggatgctatg
ttcttctgcctgagtcatgccgatgctgcagaggagatcgtagagtgcattgcagagtct
ctatccatactcaagactccactgccaaaaaagattgcacgactatatttggtctccgac
gtgttgtacaactcatcagctaaagtctccaatgcttcttattatagaaaattctttgag
acaaaactctgccagatttttgcagacctccatgctacctacaaaacaatacaaggccat
ctgcagtctgaaaactttaagcaaagagtgatgtcttgctttcgtgcatgggaggactgg
gccgtgtatccggaccccttcctgatcaagctgcagaaccttttcctgggtttggtaaac
ctggggccagatcaggaaagctctgctccagttgttgagcctgagcctacagatgatatt
gatggagcccccattatcgaggaggagttggatggggcgccactggaggacgtagatggc
gcacccattgatggagctccactggacgacctagatggagttcccataaagccccctgag
gatgacctggatggagttcccttggatgcctctggcctaaaaccagcttttaaagtggct
ccatccaaatgggaggcagtggatggatccaccttggaagcacaagctgtcaccacctcc
aaatgggaaatatttgaccagccagaagaagccagtcaaggccagcaggtagagactgag
caaaatgaggatgatgaggacagcaggagctctcactcagcagagcagcggtcctactcc
aaccctgtcagggatgatgactctgaccccagatctgcgaagtactcagagatgagcgaa
gagaagcgtgctaaattgcgggagattgagcttaaagtgatgaagtttcaagatgagttg
gaatcaggaaagagacccaagaaatctggacagagcattcaggagcaggtggaacactac
cgagacaaattgctgcaaagggaaaaagaaattgaaagggagagagaaaaggaaaaagaa
aaggacaaaaaagaaaaggaaaaaacagatgttcgttcgaaagacaaaaaagaaaaggaa
gattcacccacatccaagaaggagaagaaacgcagacacagcgcctctcccagccccaca
cgtagcagtggtcggcgggcacgctccccctccccccgctcggagcgctccgacaggtct
tcacgaaagggtgactctcggtcccgctcctcacacagggattccccaaaggagaccaac
agaaaatcctcaaagaggtcaccttcatcacccagaacacccaaacgttcacgaaggtct
cgatcaaggactcctaagaagtcagggaaaaagtccaggtcacggtccaggtctccacac
cggtcacacaaaaaatcgaagaagagcaaacactga
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