Scleropages formosus (Asian bonytongue): 108935294
Help
Entry
108935294 CDS
T04919
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108935294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
108935294
Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108935294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108935294
NCBI-ProteinID:
XP_018609320
UniProt:
A0A8C9SG50
LinkDB
All DBs
Position
6:complement(28195598..28227253)
Genome browser
AA seq
632 aa
AA seq
DB search
MSSSYSVSLPGPAPWGFRLQGGKDFSMPLTVSKLTDGGKAALANIAVGDILLSIDGLTTT
GMTHLEAQNKIKACTGNLSLTLQKSNASKPAPASKEEPLEIIKPVPVAHQPSTATTSSPT
TSYAYNKTARPFGGANSTGASAFTSASKVASIPSASSAFTPASPASSVHAPPSQPQPPQP
TQPQPPFPIGGSASRPTAPLSSAPKPSTGRTQFPVSASSAGTTASPSTPAAPQSSVYNTP
INLYSNENACEVAMGQRRGLLEKHGVAEHLNGASRKPIDDPEPHLVQPHCDTSKKWLVED
QEDWNSRTGTSQSRSFRILAQMTGTESSKGQENDAVKHETVIETPLNVHHSSPVKTMTKV
PAGGPQSSNSGSIAPFKAPSAQGKPSTWQTSHSAGSNLSKTAPHKGQVTPSFGQVSSSGA
KGPVLDRPAPQPHPKDQNSLVQRAEHIPAGTRTPMCAQCNKVIRGPFLVAMGKSWHPEEF
NCAHCHTSLGDVGFVEERGSVYCAHCYEQFFAPICARCQQKILGEVINALKQTWHVYCFL
CASCQQPIRNNIFHLEDGEPYCERDYYNLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCF
VCAVCSTSLESQAFFSKKDKPLCKKHAHTVKI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctactctgtgtccctgcctggccctgccccctggggattccgactgcag
ggggggaaggactttagcatgcccctcactgtctccaagcttacggatggggggaaggca
gccttggcgaacattgctgtgggagacatactactttccattgatggccttaccaccaca
ggcatgacacatttggaggcccagaacaagatcaaggcctgcacaggaaacctcagcctc
accttgcagaaatcaaatgcttcaaaaccagctccagcctcaaaggaagagcctcttgaa
atcattaaaccagtgccggtggcccaccagccttcgactgctactacatctagccctacc
acaagctatgcctacaacaagactgcccggccatttggtggtgcaaatagcactggagcg
tcagccttcacctcggcatctaaagtagcatcaatcccatcagcctcctctgctttcacc
cctgcatcccctgcctcctcagttcatgctccaccctctcagccccagcctccgcaaccc
acccagccacagcccccctttcccattggtggcagtgcctcccgccccactgctccgctg
agttctgcgccaaaacccagcacaggccgaactcaatttcctgtatctgccagctctgcc
ggaacgacagcatccccttccacccctgctgcaccacaatcctctgtctacaatacacca
atcaacctgtactccaatgagaatgcctgtgaggtggctatgggccagaggcggggccta
ctggagaaacatggtgtggctgagcatctcaatggggcttccagaaagcccattgatgat
cccgaaccccacctggtgcagccgcattgtgatactagtaagaagtggctggtggaggac
caagaagactggaactcccgtacaggcacttcacagtcccgttccttccgcattcttgcc
cagatgactggcacagaaagttccaaaggccaggagaatgatgctgtgaagcatgaaaca
gtgattgagaccccgctgaacgttcaccactcatctcctgtaaagactatgactaaagtg
cctgcaggaggaccccagagcagcaacagtggttccatagcacccttcaaggccccctct
gctcagggcaaaccatctacctggcagaccagtcattcagcaggatccaacctgtccaag
actgcacctcataagggtcaggttacaccctcttttggtcaagtgagctccagtggagca
aagggacctgtgttggaccgccctgcaccccaaccacatcccaaagaccagaatagtctt
gtgcagagggcagagcacatccctgctgggacacgcacacccatgtgtgcccagtgcaac
aaagtcatcaggggccctttcctggttgccatggggaaatcatggcaccctgaggagttc
aactgtgcacattgccatacgtccctgggagatgtgggctttgttgaggagcggggctcc
gtatattgtgctcactgttatgaacagttctttgctcccatctgtgctcgctgtcaacag
aagatcctgggggaagtgatcaatgccctgaagcagacctggcatgtgtactgcttcctc
tgtgcatcatgccagcagcccatccgtaacaacatcttccacctggaggatggcgagccc
tactgtgagagagattactataacctctttggtacgagttgccatggctgtgatttccca
atagaggcgggtgacaagttcctggaggccctaggattcacctggcacgatacctgtttt
gtgtgtgcggtatgcagcaccagtctggaaagccaagctttcttctccaagaaggacaaa
ccactgtgcaagaaacatgcccacactgtcaagatctga
DBGET
integrated database retrieval system
