Scleropages formosus (Asian bonytongue): 108935317
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Entry
108935317 CDS
T04919
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108935317 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108935317 (vcpip1)
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108935317 (vcpip1)
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C64
108935317 (vcpip1)
Ubiquitin system [BR:
sfm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
108935317 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
108935317
NCBI-ProteinID:
XP_018609338
UniProt:
A0A0N8K1C4
LinkDB
All DBs
Position
9:24613956..24623999
Genome browser
AA seq
1177 aa
AA seq
DB search
MSLQQGSKKKDKRILCGTCPDPKCQARLFFPAHGSVSIECTECGQRHEQRNLLKVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTKYGMDKQTGKAKLLR
DMNQGDMFDCSLLGDRAFLIEEEHVCTVGYGKDRSGSLIYLHDTLEEVKKANRNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKENLDRYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
KCRGKDGQLNKPICIAWSSSGRNHYIPLVGIKNAPLPRLPARLLPKAWGVPQELIKKYIA
LELDGSCIIGGDRSLQDKYLMRLVAAMEEVFMEKYSIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAAKKSVLENRLHRCLICNALSELHVPPEWLSPGGKFYNLAKSTHGQLKVDKNYSF
PLNNVVCSYDPERDVLVPDYKLSTLSTCNWCHGTSVRHIRGDGSVVYLDGDRTNTRSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQFESDPSLNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDEYNPVAIDGAHAQRVTDSADGPGAAETQP
PTKIILTGQKAKTLHKEELTMSKAERSIQQSIGEHAPVAQKKRTERLKQEQRGQVRPASP
GMPQDGPSSSSAPATPTKAAATASPKSNKEKKIRVTTDDGRQAMLTLQAETTFSELQGSI
AKEFSVPPAQQCIRYGFPPKELLPPKEGQEKEPLPLQHGDRVTVETLRDPREKGGPAPAA
ASASTVALHSAGSEEPASSSRVTSRELQENIDLEMSSLCLLATLMGEDVWSYAKKLPHLF
QQGGVFYNIMKKDMGLMDGKHCTLPHLSGKTFVYNAAEERLELCVDAAGHFPVGPDVEEL
VKEALAQLRSEAAARSREGSPAHGPLRLGSGGVVRKKEALRGVTAFQGKGHSLGGSPPER
KPLTRKHSAGVDLSASASVRPTASEDAARELVRTAPGFVTLRDGRHLDPSTVEAQRRRLQ
EMVSSIQASMDRHLREQSQGTGDPDQHGTETGAPADRTEVEPPSAPEPSSMEVSAAGGMA
ETALMEQPEKGVAVEEQEEMESQDAEPTNTMEPMDHS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcagcagggatcgaaaaagaaggacaagcgcattctgtgcggcacctgcccg
gaccccaagtgccaggcgcggctcttcttcccagcgcacggctcggtcagcatcgagtgc
accgagtgcggccagcgccatgagcagaggaacctcctcaaagtggaggaggtcaccgat
ccggacgtggtgctccacaacctgctgaggaatgctctgctgggggtcaccggcgctccc
aagaagggcaccgagctcgtgaaagtgatggggctctccaactaccactgcaagctgctc
tcccccatcctcaccaagtacggcatggacaagcagacgggcaaggccaagcttctgaga
gacatgaaccagggggacatgtttgactgctcccttcttggggacagagccttcctcatt
gaggaggagcacgtgtgcaccgtgggctacggcaaagaccggtccggcagcctcatctac
ttgcacgacactttggaggaggtgaagaaggccaaccgcaacaaggaatgccttatcccc
gtgcacgtggacggggacggacactgtctggtccacgccgtgtcccgggccctggtgggc
agggagctcttctggcatgccttgcgggagaacctcaagcagaacttcaaggagaacctt
gaccgctacaaggccctcttccaggacttcatcgacgcggccgaatgggaggacatcatc
aacgagtgcgaccccctcttcgttccgccggagggcgtgccgcttggcctgaggaacatt
cacatattcggcctggccaacgtgttgcaccggcccataatcctgctggactcgctgagc
ggcatgcgcagctccggcgactactcggccacctttcttccgggactggtgccggaggag
aagtgcaggggcaaagacgggcagttaaacaagcccatatgcattgcctggagcagctcg
gggcgcaaccactacattcccctggtggggatcaagaacgccccgctgcccaggttgcct
gccaggctgctgcccaaggcctggggcgtgccgcaggaactcatcaagaagtacatcgct
ctggaactggatgggagctgcatcattggcggcgaccggagcctccaggacaagtacctg
atgaggttggttgccgccatggaggaagtcttcatggagaagtacagcattcacccttct
ctggtggccgacgtccaccagtacgtgtacaggaggacgggtgtgattggggtccaaccg
gaggaggtcacggaggccgccaagaaatcggtgttggagaaccgccttcaccgctgcttg
atctgcaatgcgctgtcggagctccacgttcctcccgaatggctgtcgcccggcggtaag
ttctacaaccttgccaagtccactcacgggcagctcaaggtggacaagaactacagcttc
ccgctgaacaacgtggtgtgctcctacgacccggagagggacgtcctcgtgccggattac
aagttgagcactctgagcacgtgcaactggtgccacggtacctctgtgcgccacatccgt
ggcgacggctctgtggtgtacttggacggcgaccggacgaacacccgttcccaagggggc
aagtgcggctgtgggttcaagcacttttgggaaggcaaggagtacgacaatctgcccgag
gccttccccatcactttagagtggggcgggagggttgtgagggagaccgtgtactggttc
cagtttgaatccgacccaagtctgaacagcaacgtttacgatgtggccatgaagctggta
accaagcatttccccggcgaatttggcagcgagattctcgtgcagaaggtggtgaacacc
attttgcatcacacggccaagaagaacccggacgaatacaaccctgtcgccatcgacggg
gctcacgcccagcgggtgacggactcggccgacggcccgggagctgcggagacgcagccg
ccgaccaagatcatcctgacggggcagaaggcaaagacgctgcacaaggaggagctgacc
atgagcaaagcggagcgcagcatacagcagagcattggggagcacgctccggtggcgcag
aagaagaggaccgagcggctgaagcaggagcagagagggcaggtgcggccagcttctccg
ggtatgccccaggacgggccttcgtcgtcctcagccccagccacacccaccaaagctgca
gcgaccgcctctcccaagtccaacaaggagaagaagatccgcgtgaccacggatgacggg
cggcaggccatgctcacgctccaggccgagaccaccttctccgagctccagggaagcatc
gccaaagaattctccgttccccctgcccagcaatgcatccgctatggcttcccgcccaag
gagctgctcccgcccaaggagggccaagagaaggagcccctgccgctgcagcacggagac
cgggtcacggtggagaccttgagggacccccgggagaagggaggtcccgctcctgctgcc
gcatctgcctccacggttgccctccattccgcggggagcgaggagccggcatcctccagc
agggtgacctcgcgagagctgcaggagaacatcgaccttgagatgtcttccctctgcctt
ctagcaactttaatgggagaagatgtctggtcctacgctaagaaactgcctcacttgttc
cagcaaggtggagtcttctacaacatcatgaaaaaagacatgggcctgatggatggtaag
cactgcacgctgccgcatctcagcgggaagacgtttgtgtacaacgcagcagaggagcgg
ctggagctctgcgtggatgcggcaggccacttccctgtgggccctgacgtagaggagttg
gtgaaggaagccttggcgcagctccgctcggaggcagctgctcggagccgtgaggggagt
cctgcccacgggccgctgcggctgggcagcggaggcgttgtgcgtaagaaggaagcgctg
cgtggcgttaccgccttccaaggcaagggccactctctgggtggctcgccccctgagcgc
aagcctctaacccgtaagcacagtgctggggtggacctgagtgcgagcgcctccgtacgg
ccaactgcctccgaggatgcagcccgggagctggtgcgcacggcgccaggttttgtcacc
ctgcgggatggccggcacctggaccccagcactgtggaggcgcagcgaaggcgcctgcag
gagatggtctcctccatccaggcctccatggaccgccacctgagggagcagagccagggg
accggagacccggaccagcacgggaccgaaactggggccccggcggatcggacagaggtg
gagccaccctcggcccctgagccctcaagcatggaagtgagtgcggcaggtggtatggcg
gaaacggccttaatggagcaacccgagaagggagtggcggtggaggagcaggaagagatg
gagagccaggatgcagagcctaccaacaccatggaacccatggatcattcctga
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