Scleropages formosus (Asian bonytongue): 108935395
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Entry
108935395 CDS
T04919
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108935395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfm02000
]
108935395
Transporters [BR:
sfm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108935395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
108935395
NCBI-ProteinID:
XP_029110683
LinkDB
All DBs
Position
9:19284349..19315359
Genome browser
AA seq
2270 aa
AA seq
DB search
MGVGSQIRLLLWKNWTLRKRQKIRFLVEIMWPVILFIGLVWLRKANPLYRQDECHFPNKA
MPSAGILPWIQGIFCNANNPCFRHPTRGESPGLVSNYNNSILARFFADAQELLLGEPEFQ
HLGRLWEELTVLSTFVDTLRASPAQVSGRGLKIEDVLKDNETLTTFLLSDVRLPDTIVYQ
LVNSQVRVEQFANGVPDLRLKDIACSQTLLSRFIIFPSLEGLYAVRNTMCALSQPSLQAI
EDRLYANVDFFKLFQLLPRVLDNDKAGLDLRVWSKVLSPVSEKMQELMERNSTKDLLQVL
YPLLQTGATSTASQLTRAASNLFCGYPEGAGSRVVSFNWYEDNNYKAFLGVNRTKKRSDY
VYDKTASPFCNALMKDLETDPIFRVIWASVKPFLMGKVLYTPDTPAVKQILRSANTTFEQ
LERLRNMGKAWEEVGPQLQAFFQNSVQMNMIRDTIMNPTVTDFIDQNLEGTGFSSRHILN
FLYIGPPSDRSYDMPSFDWRNIFSLTDHIIRMLNKYTECLDLDKFVGYRDEGEMTRQALD
LLEENKFWAGLVFLDMDPLTTKPPPHVKFKIRMDIDAVERTNKIKDRYWDPGPRADPMED
LRYVWGGFAYLQDMIEHGIIMTQTLRDWPLGVYLQQMPYPCYVDDLFMLTLNRCFPIFMV
LAWIYSVSMMVKSLVLEKELRMKETLKAMGVTNGVIWAAWFIDSFLIMSASTALLTAIIM
IGKVLNYSDPLLLFLFLLSFTIVTIVQCFLMSVFFNKANLAAACSGIVYFTLYLPHVLCF
AWQDHITKDMKILVSLLSQVAFGFGTEYLSRYEEQGLGLQWDNIQSSPLERDEFSFHISI
QMMWFDTFLYGILAWYLDNVFPGQYGIGRPFYFPLQLSYWIRQEPVLPGQRFHFDLRIDL
ALGTSFFETEPVGLPVGVSVQDLVKVFSGGSRPAVNGLSISFYEGQITSFLGQNGAGKTT
TMSILSGLFPPTSGTAYINGKDIRTEMDTIRQCLGMCPQHNILFHHLTVAEHILFYSLLK
GQPLPKALQEVESMLEDLGLPHKRDEEAQNLSGGMQRKLSVSMAFVGGAKVVILDEPTSG
VDPYSRRSIWDLLLKYRPGRTVIMTTHHMDEADLLSDRIAVVSKGRLHCCGSPLFLKSRF
GAGFYLTLARRMGDRRGTHKETECDCASECSCDCSICTKYKEDAQSQSKASERQLDGDVE
IITALIQHHVPEAKLVDVIGQELTYLLPNKNFKNRAYASLFRELEEMLSDLGLTSFGVSD
TSLEEIFLKVTADGEDGSGPSDPERKKLHIQSSIQSFAPVCPAARDLGKGLGRWVPGPSE
GTDAKGSRQVKGLCLVFQQFFALLVKRFHHATRSHKDFLAQIVLPASFILVALVFTLIIP
PFGEYPSLTLSPWMYGRQFTFFSNERTLDPEMIHFGEVLLNRPGFGTRCMLDEPLEDFPC
NNITTPWEAPEVSPDVAKMLLEPQWTALEPSPSCQCSTGERLTMLPVCPPGAGGFPPPQR
IQPTGDVLLDLTGRNISDYLVKTYPTLIRASLKSKYWVNEQRYGGISVGGHLPVLVLDPK
AVQDILIQMGRMLNVTGGKYSRLALVGIAPFLKYMENEYNVKVWYNNKGWHAMVSFMNVA
NNAILRASLPPDASLNEYGITAINHPLNLTKEQLSEVTVLKTSVDAVVAICVIFAMSFIP
ASFVLYLIQERVTKAKHLQFVSGVSPAVYWTANFFWDMINYSVSAAMVVGIFVAFDKKCY
TSPTNLRALVALLLLYGWSVTPMMYPMSYVFNIPSTAYVALACINLFIGINSSAITFILE
LFENSQAVLKFNELLKSILLIFPHFCLGRGLIDMAMNQAVTEVYARFGEEYSLNPFSWDF
LGKNLVSMVVEGFVYFILNIFIQYRFFIHRRPGGRKVPINAEDEDVAEERERIYIGARNN
DILQAKNLSKTYIGQTRPAVDSICVGVAPGECFGLLGVNGAGKTTTFRMLTGDTDVSSGD
ATIAGYSILTNILEVHQNMGYCPQFDAIDDSLTGQEHLHLYARLRGVPESEVSRVAEWGI
RKLGLSEYAGRCAGTYSSGNKRKLSTAIAMIGCPTLLLLDEPTTGMDPHSRRLLWNSIMS
VIQEGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYMVTLKIRAVE
PNTAPDLSTAEAFMETSFPDCVRREKHHNTLQYEVASSSLARIFQLVLANKEKLSIEDYS
VSQTTLDQVFVNFAKQQSGEDDAIVLHPRAAGARRDVRVSPVSSFGKKEN
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgggagttggtagtcaaatcaggttattactatggaagaactggactcttcggaagcgg
caaaagatccgttttttagtagagattatgtggcctgttattctgttcatcggactcgtg
tggctcaggaaagcaaacccactgtaccgccaagatgagtgtcattttcccaacaaggct
atgccctccgctggaattctgccatggatccaggggattttctgcaacgccaacaatccc
tgtttccgacaccctactcgcggagagtctccaggccttgtgtctaactacaacaactcc
atcctggcccggttctttgcagatgcccaggagcttcttctaggggaaccagagttccag
cacctgggcaggctgtgggaggagctgacagtgttgagcacctttgtggacaccctgcgc
gctagccctgcccaggtctcaggtcgagggctgaaaatagaagacgttctcaaggacaac
gaaacgctcacaacgtttctactgagcgacgtacgcttgccagataccatagtgtaccaa
ctggtgaactcccaagtacgcgtggagcagttcgcaaacggtgtcccggacctgaggttg
aaggacatcgcctgcagccagacccttctgagccgcttcatcattttccccagccttgag
gggctgtacgccgtccgcaacacaatgtgtgccctgtctcagccgagcctgcaggccatc
gaggaccggctctatgccaacgttgacttcttcaagctctttcagctgctacccagggtc
cttgacaatgacaaagctggcctcgacctccgtgtctggagcaaagtgctgtcccctgtg
tccgagaagatgcaagagctcatggagaggaacagtaccaaggacctgctgcaggtcttg
tacccacttcttcagacaggggccacctccacagcttcccagctcacaagagctgcttct
aacctcttctgtggctaccctgagggggcaggctctcgtgtggtctctttcaattggtac
gaggacaacaactacaaagcctttcttggagtcaacagaaccaagaagcgtagtgactat
gtgtacgataagacggcaagccccttctgcaatgcactgatgaaggacctggagacagac
cctatcttcagagtcatctgggcttcagtgaagccctttctcatggggaaggtcctatat
accccagatacaccggctgtgaagcagattttacgaagtgccaacactacatttgaacag
ctagagaggctgaggaacatggggaaggcctgggaagaagtgggcccacagctccaggcc
ttcttccagaacagcgtgcagatgaacatgatccgagacactatcatgaatcccacagtg
actgacttcatagatcagaatctagaaggaacagggttctcctcaagacacattctcaac
ttcctgtacataggaccgcccagcgatcgctcatatgacatgcccagtttcgactggaga
aacatcttcagcctgacagaccacatcataaggatgctcaataagtatacagagtgtctg
gatctggacaagtttgttggctacagagatgagggtgagatgacacgccaggccctggac
ctgctggaagagaacaagttctgggcagggctcgttttcttggacatggatcctctgacc
accaaaccgccccctcacgtcaaattcaaaattcgcatggacatcgatgctgtggagcgg
actaacaaaatcaaggacagatactgggaccctggtccacgtgcagaccctatggaggac
ctgcgctacgtgtggggaggctttgcctaccttcaagacatgatagagcacggcatcatc
atgacacagaccctcagggactggcccctgggtgtctacctgcagcagatgccctacccc
tgctacgtagatgacctattcatgctgacgctgaatcgttgcttccccatcttcatggtc
ctggcctggatctactcggtgtccatgatggtgaagagccttgtgctggagaaggagttg
cgtatgaaggagaccctgaaagccatgggggtgaccaacggagtgatctgggccgcatgg
ttcatcgacagcttcctgataatgagtgctagcacagctctgctcactgccatcattatg
attgggaaagtgctgaactacagcgaccccctactcctcttcctcttcctgctgtcattc
accattgtgaccattgtacagtgcttccttatgagtgtcttcttcaacaaggccaacctg
gcagcagcctgcagcggcattgtttatttcactctctacttgccacacgtcctgtgcttt
gcctggcaggaccacatcaccaaggacatgaagatcttggtgagtctgctgtcccaggtg
gcgtttggctttggcacagagtacctgtccaggtatgaagagcagggcctgggtctacag
tgggacaacatccagagcagccctcttgagagagacgagttctccttccacatatccatc
caaatgatgtggtttgataccttcctgtatggcatcctggcttggtatctcgacaatgtc
tttccaggccagtatggaataggccggccgttttatttcccactgcagctgtcatactgg
attagacaggaacccgtactgccaggtcagcgcttccattttgacttgagaattgacctg
gcgctagggacgtccttcttcgagacggagccagtgggtctccccgtgggcgtatccgtg
caggacctggtcaaggtcttcagtggcggctctaggcctgcggtcaacggcctgagcatc
agcttctatgagggacagatcacgtccttcctggggcagaatggagcaggaaagaccact
actatgtccatcctgtcaggtctgtttcctccaacttcaggcaccgcctacatcaatggc
aaggacattcgcactgaaatggataccatccgccagtgtctagggatgtgtccccagcac
aacattctgtttcaccacctgactgtggcagaacacatcctgttttactcccttctgaag
gggcagccattgcccaaggccctgcaggaggtggagagcatgctggaggatctggggttg
ccccacaagagagacgaagaggctcagaacctctcagggggcatgcagaggaagttgtct
gtgtctatggcatttgttggcggtgccaaggtggtcatactggatgaaccaacatctgga
gtggatccgtattcccgccgttcgatctgggaccttctactaaagtaccggccaggccgt
acagtgatcatgaccacccaccacatggacgaggccgacctgctgagcgaccgcatagcc
gttgtctcgaagggtcggctgcattgctgcggctccccgctgttcctgaagagccgcttt
ggtgccggtttctatctgactttggcacgtcgaatgggagaccgaaggggaactcacaag
gagacagagtgcgattgcgcatcagagtgctcctgcgactgttccatctgcactaagtat
aaagaagatgcccagtcccagtccaaggcttcagaacgacagctagatggggatgtggaa
atcattactgctctgatccagcatcatgtcccagaggccaagctggtcgatgtgattggt
caagagttgacctatctgctgccgaacaagaacttcaagaaccgggcctatgccagcctg
ttccgtgagctggaggagatgctgtctgacctcgggctgacaagcttcggagtctcggat
acatcactggaggagatattcctcaaggttactgctgacggagaagatggcagtggtcca
tctgacccagaaagaaagaagctgcacattcagtcctcaattcagtcttttgctcctgtc
tgtcctgcagctcgtgacctaggaaagggtctgggacgctgggttcctgggccctcagag
ggcactgatgccaaaggctccaggcaggtcaaaggcctctgtctggtcttccagcagttc
ttcgccttgctggtcaaacggttccatcatgccacacggagccataaggatttcctcgct
cagattgttttgcctgcgagcttcatcctagtggctctggtgttcactctcatcattcct
ccatttggtgaatatcctagtttgaccctcagcccctggatgtatgggcgtcagttcacc
tttttcagcaatgagcgcaccttggatccggagatgatacacttcggagaggtgctttta
aacaggcctgggtttggaacacgctgcatgctggatgaacctctggaggactttccttgc
aacaacatcaccacgccgtgggaggcccctgaggtgtccccagatgtggctaagatgttg
ctggaaccccagtggactgcgctggaaccctctcccagttgtcagtgcagcacaggagaa
aggctcaccatgctccccgtgtgtccgccgggggccgggggattccccccaccacagaga
attcagcccactggcgatgtcctgcttgacctcacgggcagaaacatctcagactacctt
gtcaagacctatcccacacttatcagggccagcttaaagagcaaatactgggtgaatgag
caaagatacggaggcatctctgttggcgggcaccttcccgtgctcgttctggaccccaaa
gctgtgcaggacattttgattcagatgggccgcatgctcaatgtcacagggggtaaatac
tcaagacttgctcttgtaggaatagcaccattcttaaaatatatggaaaacgaatataat
gtcaaggtgtggtacaacaacaaaggctggcatgcgatggtgtccttcatgaacgttgcc
aacaatgccatcctccgagcaagcttgcctccagatgcaagcctcaacgagtacggtatc
actgccatcaaccatccgctcaacctcaccaaggagcagctctccgaggtcaccgtactg
aagacatccgtggatgctgtggtggctatctgcgtgatctttgccatgtccttcatccca
gccagttttgtgctctacctcatccaggagagggtgaccaaggccaagcacctgcagttt
gtcagtggtgtcagtcccgctgtctactggactgccaatttcttctgggacatgataaac
tattctgtcagtgctgcgatggttgtgggaatatttgttgcttttgataaaaagtgctac
acttcaccaaccaatctccgtgccctggttgctttactccttctttacgggtggtccgtg
acacccatgatgtatccaatgtcatatgtgtttaacatcccgagtactgcctacgtcgca
ctggcgtgcattaacctgttcattggcatcaacagcagtgccataacattcattttagag
ctcttcgagaacagccaggctgtactcaagttcaatgagctgctgaagagcattctgctt
atatttcctcatttttgtttgggccgaggtctgattgacatggctatgaaccaagcagtg
actgaagtgtatgctcgtttcggggaagagtatagcctgaacccattcagctgggatttt
cttgggaaaaatctagtttccatggtggtggaaggctttgtgtatttcatcttgaatatt
tttattcagtatcgcttttttattcatcgccgtcctggcggtaggaaagtgcctataaat
gcagaggatgaagatgttgcagaggagagagagaggatttacattggggcgagaaacaat
gacatccttcaagcgaaaaacctgtccaagacatacattggtcagaccaggccagctgtg
gacagcatctgcgttggcgtcgcccctggggagtgctttggcctcctgggtgtcaatggg
gctggaaagaccactaccttcaggatgctgacaggggacacagatgtgagctctggggat
gccaccattgctggttacagcattcttaccaatattctggaggtccatcagaacatgggc
tactgcccacagtttgatgccattgatgactctctgaccggccaagaacacttgcatctg
tacgctcgtctacgtggggttcccgagtctgaagtcagcagggttgcagaatggggaatc
aggaaactgggcctatctgagtatgcagggcgctgtgcaggaacatatagcagtggcaac
aagcgcaagctctctacggctattgctatgataggctgccctacccttttactgctggat
gaaccaactacaggcatggacccacactcgcgccgtttattgtggaactccatcatgagt
gtcattcaggaagggagagcagttgttctgacatctcacagcatggaggaatgtgaagct
ctttgcactcgtctagctattatggtcaatggaaccttcaaatgtcttggtaccatccag
cacctcaaatacaagtttggtgatggctacatggtcaccttgaagatcagagcagttgaa
ccaaacacagccccagacctgagcactgcagaagcgttcatggagaccagcttccctgac
tgtgtacgcagggagaagcatcacaacaccctgcagtatgaagttgcctcctcctccctg
gcccgcatcttccaactggtactggccaataaggagaagctctccattgaagactactca
gtctcacagactacgcttgatcaggtcttcgtgaactttgcgaagcagcagtcaggagag
gatgatgccatagtgttacacccaagggcagctggtgctcggcgagatgtcagggtttca
ccagtcagttcatttggcaagaaagaaaactga
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integrated database retrieval system
