Scleropages formosus (Asian bonytongue): 108935541
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Entry
108935541 CDS
T04919
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03320
PPAR signaling pathway
sfm04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108935541
03320 PPAR signaling pathway
108935541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108935541
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfm03310
]
108935541
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108935541
Nuclear receptors [BR:
sfm03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
108935541
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
108935541
NCBI-ProteinID:
XP_018609757
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Position
9:complement(18466437..18486285)
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AA seq
467 aa
AA seq
DB search
MANSHISNPYSVDDTEPYLHMNSTRPMNPASSQHPMNCMLGHPTIISTSSSSRHLPSSMD
TMASSINGLTSPYSVITSAVGSPQVSLPSTAPMNFGALSSPQMSSLNNVSSTEDIKPPIG
LEGLGSMSSYPCTSPGSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCR
DSKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRAKDKSDNEAESTCSAYDDMPV
DKILEAELSVEPTTEPSVDGSPGNSSSDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRNSAHSAGVGSIFDRVLTELVS
KMKDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVESLREKVYASLENYTKQKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQTT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagccacataagcaacccgtattctgtggacgacaccgagccgtacctgcac
atgaattccaccaggcctatgaacccagcctcttcccagcatccaatgaactgcatgttg
ggacaccctaccatcattagcacctccagctcctcacggcacctcccttcctccatggac
accatggcttcttccataaatgggttaacctccccatactcagttatcacctctgcagtg
ggatctccccaagtatccctgccctccacagctcctatgaactttggtgcactgagcagt
cctcagatgagctcactgaacaatgtgagcagcaccgaggacatcaagccccccatcgga
ctggaaggactagggagcatgagcagttacccttgcaccagtcctgggtcactgaccaaa
cacatttgcgccatctgcggcgaccgctcttcagggaagcactatggtgtctacagctgt
gagggctgcaagggcttcttcaagaggaccatcaggaaagacctcacctacacgtgccga
gactccaaggagtgcctcatcgacaagcgccaacgtaaccgctgccagtactgccgctac
cagaagtgtttggctatgggaatgaaaagagaagcggtgcaggaggagaggcagcgagca
aaggacaagagtgacaatgaggcagagtctacctgcagcgcctatgatgacatgccagtg
gacaagattctggaggcagagttgtctgtggagcccacaacagaaccctctgtggacggt
agtcctggcaactcgtccagcgatcctgtgacaaacatctgccaggcagcagacaagcag
ctcttcaccttggtcgagtgggcaaagaggatcccacatttctctgaactgccgctggat
gaccaggtcatactgctgagagcaggttggaacgagctgctcattgcctccttctcgcac
cgttctgtgacagtaaaagatggtattcttctggctaccgggctacatgtgcatcgcaac
agcgcccacagtgctggtgtgggctcaatctttgacagagttctaacagaattggtgtcg
aagatgaaagacatgcagatggacaagacggaactaggatgtctccgagccattgtcctc
ttcaacccagatgcaaaaggtttgtcaaacccttctgaggtagagagcctccgagagaag
gtgtacgcttcgctggagaactacaccaaacagaaatatccagagcaacccggaaggttt
gctaagctgctacttcgactgcctgctctccgctccatcgggttgaaatgtctagaacat
ctatttttctttaagctcatcggtgacacccctatagataccttccttatggagatgctg
gaggctccacatcaaaccacatga
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