Scleropages formosus (Asian bonytongue): 108935640
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Entry
108935640 CDS
T04919
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
sfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108935640 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
108935640 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108935640 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108935640 (gtf2h4)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108935640 (gtf2h4)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108935640 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108935640
NCBI-ProteinID:
XP_018609915
UniProt:
A0A8C9S0W2
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All DBs
Position
23:6264400..6272353
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AA seq
462 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPDILDRLYNHPATCLAVFRELPVLAKNYVMRMLFLDQALP
EAATSLWVKKDGQKEHDHCVSVLRGLRLWHSQQLQGGLQGIVLNPIFKDNLRIAVLGGGK
AWADEGSILGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLTQAGLMRS
EAGEAPCITSAGFQFLLLDTASQLWYFILQYLNTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTANSSSASMPVTPG
TGDSGFIIVETNYRLYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIANGIT
AHQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLSFTEGVLYNQFLSQADFEV
LRDRAQELGVLVWQNAPHRVMVVTPHGHSEVKRFWKRQKSHT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgcgtgcagctgcagtgtaagaacctccatgagtacctgagagagctgagt
ccagacatcctggatcggctttacaaccatccagccacatgcctcgctgtgttcagggag
ctccctgtactggcgaagaactatgtgatgcgaatgctcttcctggatcaagcactccct
gaggctgccacgtccctgtgggtgaagaaggacggtcagaaggagcacgaccattgtgtg
tctgtgctcagggggcttcgcctttggcatagccagcagctccaaggggggctgcaaggg
atcgtgctgaaccccatcttcaaagacaacctgagaatcgctgttctggggggtgggaaa
gcatgggcggacgaaggcagcattctggggccagaccggcatgcgcgagacgtggagagc
ttagaccgctatgccatggagcgctgggaggtgatcctgcacttcatggtgggctcacct
agtgcagctgtgagccaggacctggctcagctgctcacgcaggctggtctcatgagaagt
gaggcaggagaagccccatgcattacctcggccgggtttcagtttcttctcctcgatacg
gcttcgcagctctggtacttcattctccagtacctcaacactgcccagtccagagggatg
gacctggtggaaattctgtcctttttgttccagctcagtttttcaacacttggaagggac
tactcagtggagggaatgagtgaatctctgctgaccttcctgcagcatctgcgtgagttt
gggctcgtcttccagaggaagaggaagtccaggagatattaccccacaaggctggccatc
accctggctgcgggcgtcacggccaacagctcctctgcctccatgcctgtcactcctggg
accggtgactctggcttcattatagtggaaacaaattatcgcctgtatgcctatacaaac
tcagaactgcagattgctctggtggccttgttcagtgagatgctataccgcttccccaat
gtggtggtggctcaggtgactagggagtcagtccagcaggccatagccaatggcatcact
gctcaccagattatccactttctgaggacaagagcacaccctgtcatgctcaaacagacc
cctgtgctcccccccacaatcactgaccagattcgactttgggagctggaacgagacagg
ctgtcattcacagaaggagtgctatataaccagttcctgtcccaggctgattttgaagtg
ctgagagacagagctcaggaattaggggtgcttgtgtggcagaacgccccacacagggtg
atggttgtgacaccccacggacacagtgaagtgaaaaggttctggaaaaggcagaaaagt
cacacatag
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