Scleropages formosus (Asian bonytongue): 108935649
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Entry
108935649 CDS
T04919
Symbol
rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03320
PPAR signaling pathway
sfm04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108935649 (rxrb)
03320 PPAR signaling pathway
108935649 (rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108935649 (rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfm03310
]
108935649 (rxrb)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108935649 (rxrb)
Nuclear receptors [BR:
sfm03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
108935649 (rxrb)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
C1_2
Motif
Other DBs
NCBI-GeneID:
108935649
NCBI-ProteinID:
XP_018609931
UniProt:
A0A8C9WN53
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Position
23:complement(5807869..5822547)
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AA seq
480 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSAQRSPPLAPSAAAMTSLPPMTTAVNSPISSMGSPFSVISS
SLGSPCVPGTPSVGYGPISSPQISVFSRSSEINSTVSMSGLHAVSSSDDVKPPFGLKPMS
THSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDEQQRSVQEERQRNKDRDGEVESTSAVNEEMPVEK
ILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDD
QVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPNEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagccgagattcccgcagccccgacagctcctctgtgtcgtctcccccctcg
gcccagcgttcgcctcctctggcaccctcagctgctgccatgacctccctgccacccatg
acgacagctgtcaacagccccatcagcagtatgggttccccgttctctgtcattagctca
tcgctgggatcaccctgtgttccgggaaccccctcggtgggctatggtcccatcagcagc
ccgcagatcagtgtgttttccaggagttcagagatcaactcaacggtgtccatgtcaggg
ctgcatgcagtcagcagctcggatgacgtgaagccacctttcggcctgaagcctatgtca
acccacagccctggacccatggtgtcccagaaacgtctttgtgccatctgcggtgaccgt
tcttctggtaagcattacggtgtgtacagctgcgagggctgcaaaggcttcttcaagcgc
acggtgcgcaaagacctgagctacacctgcagggacaacaaagactgtctggtggacaag
cgccagcgcaaccgctgccaatactgccgctaccagaagtgcctggctatgggcatgaag
agagaagtggtccaagatgaacaacagcgatcggtgcaagaggagcgtcagaggaataag
gatcgagacggggaggtggagtcgaccagcgctgtcaatgaggagatgcctgtggagaag
atcctggaggcggagatggctgtagaacagaagactgagctgcatgcagacggcagttcc
ggcgggagctcgcccaacgacccggtgaccaacatctgccaggcagcagacaagcagctc
ttcaccctggtggagtgggctaagagaatcccacatttctctgagctgcccctggatgac
caggtcatcctgttgcgtgctggctggaatgagctcctgattgcatctttctcacaccgc
tccatcacagtgaaagatggcatcttgttagccacagggcttcatgttcatcgcaacagc
gcacatagtgctggtgtgggtgccatctttgacagggagagtgcgcacaatgcagaggtg
ggggccatatttgacagggtgctcacagaactggtcagcaagatgagagacatgcagatg
gataagacagaactgggctgtctccgggcaatcatcctgttcaatccagatgctaagggc
ctatcaaaccccaatgaagtggagctgctgagagagaaggtgtatgcatctctggaagcc
tactgcaagcagagataccctgaccagcagggcaggtttgcaaagcttctcctacgacta
ccagcactgcgctccattggtttgaaatgcctggaacacctgttcttcttcaagctgatt
ggtgacacccccattgatacgttcctcatggaaatgctggaggcaccccatcaattgaca
tag
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