Scleropages formosus (Asian bonytongue): 108935874
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Entry
108935874 CDS
T04919
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04621
NOD-like receptor signaling pathway
sfm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108935874 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108935874 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfm04054
]
108935874 (nod1)
Pattern recognition receptors [BR:
sfm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108935874 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_22
AAA_18
AAA_30
AAA_29
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
108935874
NCBI-ProteinID:
XP_018610335
UniProt:
A0A8C9WI06
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Position
8:14812486..14829176
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AA seq
944 aa
AA seq
DB search
MPCGMAMDRISEGPTSTCRLLTVHRELLVQQLKNTQCILDNLQGSGFFCTEDAEIVMRAT
TKTDRVRRILELIQSKGEEACEYLLYILHKVCDTYVELHPWLKEIQYEPSTSIQKMPVVN
TDPISKYCEKLRHELGRDTRFIVSYSQKEETLLEDFYTDTLMELLSERNESLGYLNGLEQ
LLDNTGVFNPHAETNLITGDAGVGKSILLQKLQNLWSKRELNTGAKFLFKFRCRMFGSFK
ETDRISLKDLLFKYNCYPDSDPDEEVFSYIQKFPNTVLFTFDGYDEIHSAFNLRNIPEVV
CPEEKVHPLLLLMNLLSGKLLKGSQKIMTARTGTEIESRVLRKKVFLKGFSPEHLRQYTA
LHFQERQYRDLVTLQLDASPHLCSLCSIPLFCWIIFKSFKYFHAKYDNFELPDNGVTLTK
VFLLLLEVFLSRSSSPGLLQRSTRCTAETFKAGCRTLVAFSKLALLGMRKNSFVFSHEEV
AFCGIGQDDLHMGFLRPVNHYDACGSVAMYEFLHMTLQSFMAAFCLVLDESIHSGGILEF
FSECEYQKVSRIPCISCLQSNRPRGTDPFQVNDHLQFTNLFLCGLLSKPNVALLEQLLLP
GSLNKRRGILKSYLSQTVKLHLRGLPRHTTDTEGSKVHVMPNFLWALRCIFELASDDVAK
LAARGISANYIKLAYCNMFSADCSALNFVLHHHHKCLGVDMDNNNISDYGVKQLRPSFCK
MTAVRLCVNQITDNSLEVLAEELVKYKVVKVLGLYKNQITDVGAKLVAQIIEECPHLRIV
KLGGNKITSVGGKYLAKAIQKSKSIFDVGMWGNSIGDEGAEAFAQALRNHPSLTNLSLSA
NGITSKGGRSLAAALKENTSVHIFWLVQNELTDDVAPDLAEAVLVNTGLTHLWLIDNHLT
VQGAQHLAEALSHNTTLKEICMKGNLVSENEQQQFVEEKRLRFS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgggatggccatggacaggatctctgagggtcccacatctacatgccggcta
ctcacggtgcaccgggagctactcgtgcagcagcttaagaatacgcagtgcatcctggac
aacctgcaggggagtggcttcttctgcaccgaggatgcagagattgtgatgcgtgccacc
accaaaactgaccgggtgcggagaattctggagctgattcagagtaaaggggaggaagcc
tgcgagtatcttttatacattctgcacaaggtctgcgatacatatgtagagctacatcct
tggctgaaggagatccagtatgagccctctacctcaatccagaaaatgccagtggtcaat
actgatccaattagtaaatactgtgagaagctgcgtcatgaactgggacgcgacacccgc
ttcattgtttcctactctcagaaagaagagactctgctggaggatttttacacagacacc
ctgatggagctccttagtgagaggaacgaaagccttggttacctgaatggcctggagcag
ctcttggacaacactggagtgttcaacccacatgccgagaccaatttaatcacaggagat
gctggagtgggcaagtccattttacttcagaagctccagaacctatggtccaagagggag
ttgaacactggggccaagttcctcttcaagtttcgctgtaggatgtttggttcattcaaa
gaaacggacaggatttcattgaaagaccttctctttaagtataactgctacccagacagt
gatccagatgaggaagtcttcagctatatccaaaagttccccaacacagtgcttttcact
tttgatggctatgatgagatccacagtgcttttaacctgaggaacatacctgaggtggtg
tgcccagaagaaaaggtccacccgcttctcctactgatgaaccttcttagtgggaagtta
ctcaagggatcccagaaaatcatgactgccaggaccgggactgagattgagagccgagtg
ttgaggaaaaaagtgttcctgaaaggtttctccccagagcacctacggcaatacacagca
ctgcacttccaagagaggcaataccgagacctggtgactttgcagctggatgccagccct
catctctgcagtctgtgctccattcccctcttttgctggattatattcaaaagctttaag
tacttccatgccaagtatgacaactttgaactgcctgacaatggtgtcacacttaccaag
gtcttcctgcttttgctggaggtctttttgagccgttcgtccagccctggcttgctacag
cggagcactcggtgcacagcagagacattcaaggctggttgtcgcactctggtggcattt
tctaagctagctctccttgggatgcggaaaaacagctttgttttcagccatgaagaagtt
gcattctgtggaatcggccaagacgacctgcatatgggcttccttaggccagttaatcac
tatgatgcctgtggaagcgtggctatgtatgagttccttcacatgactctacagtccttc
atggctgccttttgccttgtgctagatgagagcatccactctggaggaatcctagagttc
ttctctgagtgcgagtaccagaaagtttccaggatcccatgcatctcttgtctgcagagc
aaccggccccgtggcacggacccattccaggtcaacgatcacctacagttcactaatctc
ttcctctgtgggctgctctccaagcccaatgtggccctgctggagcaactgctgcttcca
ggttccctgaataaaaggcggggtatcctcaagtcctacctctcccaaactgtgaaattg
cacttgaggggcctcccacggcacaccactgacactgaaggcagtaaggtacatgtgatg
cccaacttcctgtgggcattgcgctgcatttttgagctggccagtgatgatgtagccaaa
ttggcagccaggggcatctcggccaactacatcaagctggcatactgcaatatgttctcg
gccgactgtagcgccctcaactttgtgctgcaccaccatcacaaatgccttggagtggac
atggacaacaataacatcagtgactatggagtgaagcagcttcggccatccttctgtaaa
atgactgcagtaagattgtgtgtcaaccagataacagacaacagcctagaagtactggca
gaagagctggtaaagtacaaagtggttaaggttctgggtctttacaagaatcagatcact
gatgtgggagctaaactggttgctcagatcattgaggagtgtcctcatctcagaatagtc
aaactcggtggcaacaagatcacgagtgtcgggggaaagtacttggccaaagccattcaa
aagagcaagtccatctttgatgttgggatgtggggcaactccattggggacgagggggct
gaagcatttgcacaggctctgaggaaccacccgagtctgacaaacctcagcctctctgcc
aatggcataacctcgaaggggggaaggagcctggccgctgcactcaaggagaacacatcc
gttcacatcttttggctggtccagaatgagctcacagatgatgtggcaccagacctggcg
gaagctgtgctggtcaatactggattaactcacctttggttaattgacaaccatctgaca
gtgcaaggagcacagcatctagctgaggctctatctcacaacaccaccctgaaagagatc
tgtatgaagggaaacctagtctcagagaacgagcagcagcagtttgtggaggagaaaagg
ctgcgcttcagctga
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