Scleropages formosus (Asian bonytongue): 108936028
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Entry
108936028 CDS
T04919
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108936028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108936028
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108936028
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Motif
Other DBs
NCBI-GeneID:
108936028
NCBI-ProteinID:
XP_018610585
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Position
4:complement(14545769..14561807)
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AA seq
791 aa
AA seq
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MSKQNMAETATFSLEMDDRSDDERSQSRRQKKDRLLSPSNLVNTGQERIPMDMDYLHEAR
NTTPKIRFNWNFNKKLRGSEELEVQENLKKFDIKSLFAAVSSGDVSQLQGLELYLHRTMK
HLTNSEYQSNGKNALLKALLNLKDGRNDTVEFLLDVAEKMGDLKEFVNAAYTDSYYRGHT
ALHIAIERRSKYFVELLVRKGADVHAKACGKFFQPHDGPSFYFGELPLSLAACTNQRDVV
DFLMDNPYQKVNITETDSLGNTVLHALVLLADNSVENTNFINSMYDYVLTRAAKLHSEIR
LEDFENKEGLTPLKLAAKTGKIGVFEHMIQRKFHEKDIKHLSRKFTEWVYGPVSSSLYDL
TSVDSYERNSAMEIIVYGSTIPNRLEMLQIEPLNRLLKDKWERFVKWIFLINFLVYVFYL
SVFTAVAYNTKRTQEIYFVEHSRNGYLQVTGQVICALGAIYFFFKGLSDLRRKHPKMQTL
LVDGYSEILFFIQAILFIITSVLYCCGKQEYLGFMVLCLALSWINLLYFSRGSRHMGIYS
VIIQKMILSDVLRFLFVYMVYLFGFSAAVVTLLEEPAPSHTIQSGGKGRSFFQPVNNSSD
CKKPTFKSFSFTTLELFKFTIGMGDLEFTEQYQYKEVFYVLLISYIVFTYILLLNMLIAL
MNRTVEKLSEESRNIWKLQQAITILDLERSLPSCLRKRFRSGVEKELGTVPGRDQRWCFS
EQVCCDSSVEEVNWSKWRNDMGIINEDPGDHGVILLSPSQARGRSWRQLLSRTLPQCEEH
NEIGPIRSTAE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaaatatggctgagacagcgaccttctccctggagatggatgacagaagt
gatgatgagaggtcccaaagcaggaggcaaaagaaggaccgcctgctatctccttccaac
ctggtcaacacagggcaggagaggatacctatggacatggactacctgcatgaagcgagg
aacaccactcccaaaatcagattcaactggaattttaacaagaaactgagggggtctgaa
gagcttgaagtacaggagaacctcaagaaatttgatatcaagagcctgtttgcggcagtg
tcaagcggggatgtctcccagctgcaaggactagagctctatttgcatcgtactatgaag
cacttgactaattcagaatatcaatcaaatggtaaaaatgccttattgaaagcactcctg
aacctaaaagatggaagaaatgatactgtagagtttctccttgatgttgcggagaaaatg
ggagacctgaaggagtttgtcaatgcagcttacacagacagctactacagaggccacact
gctcttcatattgccattgagaggagaagcaaatactttgtggagctgttagttcggaaa
ggagcagatgtccatgctaaagcatgtgggaagtttttccagccacatgatggaccatct
ttctactttggtgagctgccactgtcactagcagcctgtaccaatcagcgagatgttgtg
gacttcctcatggacaatccctaccaaaaagtgaacatcacggagacagattcccttggc
aacacggtgctccatgccctggtgttgctggcagacaacagcgttgagaacacaaacttt
atcaacagtatgtacgactatgttctgaccagagcagcaaagctccacagtgagatcaga
ctggaggactttgaaaacaaagaagggttgacccccctaaagctggcagccaagactggc
aagattggggtctttgaacacatgatccaacgcaaattccatgaaaaggatatcaaacat
ctctctcgcaaattcacagagtgggtctatgggcctgtgtcatcatccctgtacgacctg
acctcggtggattcctatgagaggaactctgccatggagattattgtttatggcagtaca
atccctaacaggcttgagatgctccaaattgagcccttaaacagattgctcaaagacaag
tgggagaggtttgtgaaatggatatttctcatcaacttccttgtctacgttttctacctg
agtgtctttacagcagttgcttataacactaagaggacgcaggaaatttattttgtggaa
cattccagaaatggctacctgcaggtcacaggccaagtaatctgtgccctgggagcgatc
tatttcttcttcaaagggttgtcagacttgaggagaaagcatccaaagatgcagacattg
ctggtggatggatacagtgaaattctctttttcatacaggcaatcctcttcattatcaca
tcagtgctgtactgctgcggaaagcaggagtacttaggcttcatggtgctgtgtcttgct
ctgagctggatcaacctgctatacttctccagaggatccagacacatgggaatctacagt
gtcattatacagaagatgatcctaagtgatgttttacgcttcctctttgtctacatggtc
tacctatttggattttcagcagctgttgtgactcttctggaggaacctgcccccagtcac
accattcaaagcggcggcaagggccgttcttttttccaaccagtgaacaactccagtgac
tgcaagaaaccaactttcaaaagcttctctttcacaaccctggagctcttcaagttcacc
attgggatgggagacctggagttcactgagcagtatcaatacaaggaggtcttctatgtg
ctgcttatctcctacatagtgttcacctacatcctcctgctcaacatgctcatcgcactg
atgaacaggacagtggagaagctctctgaggaaagcagaaatatctggaaattgcagcaa
gccatcaccatcctggacctggagaggagtctaccctcctgcctgaggaagcgcttccgt
tcaggggttgagaaggaactgggtacagtgcctggaagggatcaacgctggtgtttcagt
gaacaggtctgctgtgactccagtgtggaggaggtcaactggagcaaatggagaaatgac
atgggtattattaatgaggaccctggggaccacggagtcattttgctgtctccatctcag
gccagaggcagaagctggcgtcagctgctcagtcgtacactcccacagtgcgaagaacat
aatgagattgggcctataaggagcactgcagagtga
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