KEGG   Scleropages formosus (Asian bonytongue): 108936121
Entry
108936121         CDS       T04919                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03082  ATP-dependent chromatin remodeling
sfm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108936121
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108936121
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sfm01009]
    108936121
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfm03021]
    108936121
   03036 Chromosome and associated proteins [BR:sfm03036]
    108936121
Protein phosphatases and associated proteins [BR:sfm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108936121
Transcription machinery [BR:sfm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     108936121
    SWI/SNF complex
     108936121
Chromosome and associated proteins [BR:sfm03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108936121
   PBAF complex
    108936121
   SWI/SNF complex
    108936121
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 108936121
NCBI-ProteinID: XP_018610731
LinkDB
Position
6:complement(34169027..34179600)
AA seq 373 aa
MALSKTFGPKPLKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRPASVEERKKI
VASSHNHGYTTLATSLTLLKASEVEEILDGKDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLSRDKKRTFPLCFDDHDPAVIHESANQPEVLVPIRLD
MEIDGQKLRDAFTWNMNEKLITPEMFAEIFCDDLDLNPLTFVPAIASAIRQQIESYPMES
ILDEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPETFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcgctgagtaaaacgttcgggccgaagccgctgaaattccagctggaggaggatggg
gacttttacatgatcgggtcggaggtgggtaactacctgcgaatgttcagaggctccttg
tataaaaggtacccgtcgctctggaggaggccggcttctgttgaggagaggaaaaagata
gtagcatcatcgcacaatcatggttacacaactttagccaccagtttgactctgctgaag
gcgtctgaagtggaagagattctcgatgggaaagatgaaaagtacaaagcagtttccatc
agcacagagccaccagcctacctgagggagcagaaggccaagcggaacagccagtgggtg
cccaccctgcccaacagctcccaccacctggatgccgtgccctgctccaccaccatcaac
cgcagtcgcctgagtcgtgacaagaagaggaccttccctctctgctttgatgaccacgac
cctgcagtcatccatgagagcgccaaccagcccgaagtcttggttccgatccgcctcgac
atggagattgacggacagaagctcagagatgccttcacgtggaatatgaatgagaaactg
attacccctgagatgtttgccgaaatcttctgcgatgacctggacctgaacccgctgacc
ttcgttcctgccatcgcctcggccatccggcagcagattgagtcctatcccatggaaagc
atactggatgagcagacggaccaaagggtcatcattaagttgaacatccacgtgggcaac
atctcgctggtggaccagtttgagtgggacatgtcggagaaggagaactccccggagaca
tttgccctcaaactgtgctcagagctgggcttggggggtgaattcgtcaccaccatcgcc
tacagcatccggggacagctcagctggcaccagaggacctacgccttcagtgagaacccg
ttacccacagtggagattgccatccgcaacaccggtgacgccgaccagtggtgccccctc
ctggagacgctgacggatgccgagatggagaagaaaatcagagaccaggataggaacacg
aggcgcatgagacgtcttgcaaatacagctccggcctggtaa

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