Scleropages formosus (Asian bonytongue): 108936158
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Entry
108936158 CDS
T04919
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108936158 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108936158 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108936158 (ncor1)
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108936158 (ncor1)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
108936158 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
108936158
NCBI-ProteinID:
XP_018610804
LinkDB
All DBs
Position
4:14655444..14728157
Genome browser
AA seq
2473 aa
AA seq
DB search
MSGSGYPTSQGAFSSEQNRYPPHSVQYTFSPGRHQPEFGVSDYRAHLQDVSSASQLLQQQ
RRRPSLLSEFHPGAERPPERRHGYEQSFHPASAPSEHETLEPKRPRIETGASEGHFPRAP
AGAVVLPHPQTAQDGLRTVGEVKKEVPLNMKAEASSPVAPHMPDEQDASPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPMEPERPVSPPPVELKHRSIVQIIYDEN
RKKAEEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQR
EQKICQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVG
QRGTGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGL
MDDPMKVYKARQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYLTKK
NQNYKTLVRRNYGRRRGRNQQQIARPSQEEKTEDKTEEDKSEKTEKKEDEEKKEDEDKDE
KEESKDISKDKEKCEGGGEDDEGKEQSAPRGRKTANSQGRRKGRITTRSMANEAASVVVE
EPPPPAPEPVLPETTQLPKPEPVQRSVREQAKAPPVAMDPQAARGTVEAGETSRWTEEEM
EVAKKGLVEHGRNWSAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDSRRSRVDR
DVSQSESVASTTSAADEEDNEGSNEEENQEDSEGVENSSDTESAPSPSQGGSSKASEQRP
DCPNGASGPGATSEQDSVSKIRELPYGELRVKLEKSPESGELAALEERPRPPYENQVQTK
TEPLDVSEVQVKLEPEAKEKGERDELMEPGVSLSQRGLPRDLHSDNDSSATCSADEDVDT
EPERQRFSMDKPSLLSSPGSVLVSSAKSHLNVQQLQQRAASIPPMVPTPFGPGSIAPLSG
YAMFQHQIKAVHESAHQEEKQRQDQTDTERRQPRFASRSPTILDRDGKPFSYIPYDMKLA
LEQEAQCHGSSGRSASPFLLSPRELAKAPAQTDTNTSRYSVPPVLQPAPNQVVQNLVDGA
RVTFSRHSRPANIPSPPPLIPTSKPSDKPSFIQGGSISQGTPGTYLPSHSQAVYGQETAK
SSVGSISLGLPRQQDPTKPVSYIKQEECSPRAEGLLSRAQFEGVVRGNTISAIQEGSITR
GTPAKVSAEALPYRGGSITQGTPALPQSSIAADILLKGTITKLATEDLSSPEKSRGEALS
KGHVIYEGKSGHILSYDSIKNPREGPRSPRMGPELKRTYEMMEGSITRGHPVREGAPYEG
LISRAMPREGPHSESKDRAVLAGSIMQGTPRTSSEAFEEGHKYGKQIKRESPPIRSFEGG
ITKGKPYEGVNTIKEMGRSIHEIPRQDLSGQDTRKTPDMAPNPRSLLEGSISQGTPLKYE
SGSSSQSAIKHNVKSLITSPSKLGHSVSQLDAADRGKYEEGSKGTERVRHTSVVSSTSVL
RSTHMETGKAQVSPGVYDDPGARRTPVTYSNSSISRGSPLLNRSQEGGITSGKPVNNHER
KSTVTPTQRDSVPAKSPVSGTDPLSAHSPFDPHHRPVVPGEIYRAHLGPPLDPAMAFHRA
LDPAYLFQRQPSPTGYNTYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQI
AIPYPPGARGIIDLAQMPPTILLPHPGETGTPPMDRITYIPGAQAPFPPRAFNPASISPG
HPAHMAATAASVERDREREREKEREREQREREKEREQREQREQRERDRMAAAAAASDYMR
GGSEQPGRPGSRGYLRSPSPSVRPQESVVQQRPSIFQGTNSKSVITQIMQMPPAAVSQGS
TRYSTAADALAALVDAAACAPQIDVAKAKDGKLEAGRTDEAASRQQQEVERRTMQSPYSA
VALPGGKPHTAYTESGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDSR
ERGSQSSDSSSSLSSSRYEGPGGGAIEVISPASSPAQSQEKQESGFSQEKQAHATGSVRG
FDLSRYRQPMESSCPQPLPTSQTDMYGQIPKTHRVMTLADHISHIITQDFARNQETTQIL
PVASSAAAFQSSSASSMSVRAKIPSRYSPENQGQTAHHSRPSSRVSPESVSDKTRNRPGK
SPERGSGAIEGYEPISPPQSYPNMEKQETVMQQAQRRDVESTEQRNDSRSPGSMSYLPSF
FTKLESTSAMVQSKKQEIFRKLNSSGGSDSDVASAQPGTEIFNLPAVTSSSSINPRNHPV
SDPASNLGLEDIIRKALMGNFEDKTEEHQGGGLQPSNSIPAGVMEVRQDASPSPNTGLSG
NKQKMMGKGSSRKSKSPNPGQGYAGTERPSSVSSVHSEGDYHRQAHSWAWEDRPSSTGSM
QFPYNPLTMRMLSSTPPSSITCASPSLQAQQQQPSQSQTPLQQGQPGNVPQSRVWEREPL
LSEQYETLSDSDD
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttcggggtacccaaccagccagggagctttcagcagtgagcagaaccgctac
ccaccccattcggtccagtacactttcagccccggacgtcaccaaccggagtttggagtc
tcagactaccgggctcaccttcaggatgtcagctcagcctcccaactccttcagcagcag
agacgacggccctccttgctctcagaattccatccaggagccgaacggccccctgagagg
aggcatggctatgagcagtcattccatccagcttctgccccatctgagcatgagaccctt
gagcccaagcggcctcgtattgagacgggcgcctcagagggtcactttcctcgcgcacca
gcaggggctgttgtgttaccccacccccaaactgcacaggatggcttgaggactgtaggg
gaggtcaagaaggaggtgcctctcaacatgaaagcagaggcttcctcccctgtagcccca
cacatgcctgatgagcaggatgcttccccctccaaactgtctaaggaggaactcattcaa
agtatggaccgtgtggaccgagaaattgccaaagtggagcagcaaatcttcaagttgaag
aagaagcagcaacaactagaggaagaagcagcaaagccaatggagccagagaggccggtg
tctcctccgccggtggaactcaaacatcggagcattgtgcagatcatttacgacgagaac
aggaaaaaggctgaagaagctcataagatacttgaagggcttgggccaaaggtggaattg
ccactttataaccaaccatcagacacaaaagtctaccatgacaacattaagactaatcaa
gtgatgagaaaaaaactcattctgttcttcaagcggaggaaccatgcacgcaaacagaga
gagcagaagatctgtcagcgttatgaccagctcatggaggcatgggagaaaaaggtggag
cgcatggagaacaacccacggcgcaaggcaaaggagagccgcacccgcgaatactacgag
cgccagttcccagagatccgcaagcagcgtgaacagcaggagcgcttccagagggttggc
caacgaggcactggcctctctgcaaccattgcacgaagcgagcatgagatttctgaaatc
atcgatggactatctgaacaggagaacaatgagaagcagatgcgtcagctctcagtcatt
ccacccatgatgtacgactcagagcaacggcgggtgaagtttatcaacatgaacggcctc
atggacgaccccatgaaggtgtacaaggctcgccagtttatgaatgtctggactgaccac
gagaaggaaatcttcaaagagaagtttgtacagcatccaaagaactttggtctgattgct
tcatatttggagagaaagtgtgtctctgattgtgttctatattactacttgacaaagaag
aaccagaattacaagacgctggtcagacgcaactatggtagacggcgaggaagaaatcag
caacagatagcacgaccctcacaagaagagaaaactgaagacaagactgaggaggacaaa
tcagaaaagacagagaaaaaagaagatgaggagaagaaggaagatgaagataaagatgaa
aaagaggaatccaaggacatcagcaaagacaaagagaagtgcgaaggtggcggtgaagac
gacgaagggaaagagcagagtgctccccgtgggcggaagaccgccaacagccagggccgg
cgcaagggtcgcatcaccacccgctctatggctaatgaggcggcctctgtggtggtggag
gagcctccacctccagcccctgagccagtgctgccagagaccacccagctgcccaagcca
gagcctgttcaaaggagtgtgcgagagcaggcaaaagctccccctgtagccatggaccct
caggcagccagaggcactgttgaggcaggggaaacctctcggtggactgaggaggaaatg
gaagttgctaaaaaagggttagtggagcatgggcgcaactggtcagccattgccaagatg
gtgggtaccaagagtgaagcacagtgcaagaacttctatttcaactacaagcgacggcac
aacctcgacaacctgctgcagcagcacaaacaggactcgcgccgttcacgtgtggatcgt
gatgtgtctcagagtgagagcgtagcatccaccacctcagctgccgatgaagaggacaac
gagggctccaatgaagaggagaaccaagaggacagtgaaggtgtagagaacagctctgac
acagagagtgccccttcaccttctcaggggggttccagtaaggccagtgagcaacggcca
gactgccccaatggagcttcaggtcctggcgctacttctgagcaggacagtgtatcaaag
atccgtgagctgccctatggggagcttcgtgtgaagctggagaagagtcctgagtcaggt
gagctagcagccttagaagagaggccccgccctccatacgaaaaccaggtgcagactaag
acagaacccctggatgtgagcgaagtgcaggtcaagctggagcctgaagccaaagaaaaa
ggagagcgtgatgagctgatggagccaggggtcagcctctcccagaggggtctacccaga
gacttgcactctgataacgactccagtgccacctgcagtgctgatgaagatgtggacact
gagccagagaggcagagattctccatggacaaaccatcattgctcagctcacctggttca
gtgctggtgtcctcagccaagagccacctgaatgttcagcagctccagcagcgtgctgca
tccattccaccaatggtaccgaccccctttggtcctggcagcatagccccattaagcggc
tacgccatgttccaacatcaaatcaaggctgtgcatgagtcggcccaccaggaggagaag
cagcggcaagaccagactgacacagagaggcggcagccccgctttgccagccggagccct
accatcctggacagggatgggaagcctttctcctacataccatatgacatgaagctggca
ctggaacaagaggcccaatgtcatggtagctctggcaggtctgcttcaccattcctgctt
tccccacgagaactggccaaggccccagcacagactgatacaaacacctcccgttacagc
gttccaccagttcttcagccggctccgaatcaggtggtgcagaacctggttgatggagca
cgtgtgacgttctccaggcacagtcggcctgccaacattccatccccacccccactcatt
cccacctccaagccctcagacaagccttctttcatccagggaggctccatctcccaggga
actcctggcacatatttgccctcccacagccaagccgtgtatggccaggagactgcaaag
agctcagtgggttccatatctctggggttgccgaggcagcaggaccccaccaagcctgtg
tcctacatcaagcaggaggaatgttcaccacgggcagagggccttctctccagggcccag
ttcgagggtgtggtcagaggaaacaccatttctgccattcaggagggaagtatcacccga
ggcactcctgccaaggtctccgccgaggccctgccatatcgcgggggatccattactcag
ggtacaccagcacttccacagtccagcatagcagcagatatcctgctgaagggcactatc
accaagttggccactgaggacctgagtagtccagaaaagtccaggggcgaggcattgtcc
aagggccacgtcatctatgagggcaagagcggccacatcctgtcctatgactccatcaag
aatcccagagaaggccccagaagccccaggatgggtcctgagctaaagcgcacatatgaa
atgatggagggctccataactaggggccaccctgtccgagagggtgctccctacgaaggt
ttgatcagccgtgctatgccaagggaagggccacactctgaatccaaggatcgcgcagtt
cttgcaggctctatcatgcaggggacaccaagaacatcttctgaagcatttgaggagggg
cacaagtatggtaaacagataaagagagaaagtccccccatccgctcttttgaaggaggg
atcacaaagggaaaaccctatgaaggggtgaacaccatcaaggaaatgggccgctccatc
cacgagatcccccggcaagacctttctggccaggacacccgcaagactccagacatggca
ccaaacccccgctccctattggaagggtctatatcccagggcacacctctgaagtacgag
agcggaagttcaagccagtcagccattaagcataatgtgaagtcactgatcacgagcccc
agcaaactgggtcatagtgtgtctcagctggatgctgcagatcgtggtaaatacgaagag
ggcagcaagggcacagagcgtgtgcggcatacctctgtggtcagctccacatcggtgtta
cgctccacacacatggagactggcaaagcacaggttagccctggtgtgtatgatgacccc
ggtgcccgcagaacgcctgtcacttacagcaacagctccatttcacgtgggtcgcccctg
ctgaaccgctcacaggaagggggcatcacctctgggaaaccagtcaacaaccatgagagg
aagagcactgtcactcctactcagcgtgacagtgtgcctgccaagtcacctgtgtcaggg
actgaccccttatctgctcacagcccctttgaccctcaccatcgaccagtggttccaggc
gaaatctatcgagcccaccttgggccccccttggatccagccatggcttttcaccgggct
cttgacccagcctacctattccagagacagccatcccccactggttacaacacatatcag
ttgtacaccatggagaacacgcgacagacgatcctcaacgattacatcacctctcagcag
atgcaagttatcccgcggcctgatgtggccagggggctgtctccaagggaacagcagatt
gccatcccttaccctcctggtgctcgagggattattgatctggcccagatgcctcccact
atcctgttgcctcaccctggggaaacaggtacaccccccatggaccgcatcacctacatc
cctggagctcaagcccctttccctcctagggctttcaacccagcttccatatctccaggt
cacccagctcacatggcagcaacagcagccagtgtagagagggatagggagcgtgagcgg
gagaaggagcgtgaacgggagcaaagagagcgggagaaggagcgggagcagagggaacaa
cgggagcagagggaacgagaccgcatggcagcagcagctgctgccagcgattacatgcgt
ggaggctctgagcagccaggcaggccaggtagccgtggttacctgcgttccccttctcca
tctgtgagaccacaggagtccgtggtgcagcagaggcccagtattttccagggcaccaac
agcaagagtgtaatcactcaaatcatgcaaatgccccctgctgcagtttcccagggaagc
acacggtacagcacggctgctgatgcacttgctgccctagtagatgccgctgcctgcgcg
ccccagatagatgtggccaaggccaaggacgggaaactggaggcaggccgcaccgatgag
gcggcttcacgccagcaacaggaggtggagcgtcgtaccatgcagtcgccctatagtgct
gtggccctgcccggcgggaagccccacacagcctacacagagagtggcaaggacaagggc
ccacccaccaagtcacgcattgaggaggagctgcgcacccgtggaaagaccaccatcact
gctgcaaatttcattgatgtcatcatcactcgacagattgcttcagacaaggactcgcgt
gaaaggggctctcagagctcagactcctccagcagcttgtcttctagccgatatgaaggc
ccagggggtggggccatagaggtcatcagccctgccagctcccctgcacaaagtcaggag
aagcaggagagtgggttttctcaggagaaacaggcccatgctacaggcagtgtccgtggt
tttgacctgagccggtaccgccagcccatggaatcttcttgcccccaaccgctgcccact
tcccagacagacatgtatggacagatccccaagacgcatcgcgttatgacccttgcagac
cacatttcgcacatcattacccaggactttgcccgaaaccaggagaccactcagatcctg
cctgtcgcctcctctgcggccgcattccagagctcttcagcttcatccatgtctgtccgt
gccaagatacccagccgctacagcccagagaaccaaggccagacagcacaccactcaaga
ccttccagtagagtgtccccagagagtgtatctgacaagaccaggaacaggcctggtaaa
tccccagagcggggtagcggggccatagagggctacgagcctatttctcctccacaaagc
tatccaaacatggagaagcaggagactgtaatgcagcaggctcagaggcgtgatgtggag
agcacagagcagaggaatgattcccggtcccctggaagtatgagctatctgccctctttc
ttcacaaaactggagagcacatctgcgatggtgcagtctaagaagcaggagatcttccgt
aagctgaactcttcgggtggcagcgattctgatgttgcaagtgcacagccaggcactgag
atctttaacctgcctgcagtgacaagctcgagtagcatcaaccccagaaatcatcctgtc
agtgaccctgcaagtaacctgggtctggaggacatcattcgcaaagccctgatgggtaac
tttgaggacaagacagaggagcaccagggcggaggcttgcagcccagtaacagtatccca
gctggtgtgatggaagtgaggcaggatgccagtccctcacccaacacaggcctgtcaggt
aacaagcaaaagatgatgggcaaaggtagtagcaggaagtccaagtctccgaacccaggg
caaggctatgctgggactgagcggccctcctccgtgtcatccgtgcactctgagggagac
taccatcggcaagcccattcttgggcctgggaagacaggccttcgtccactggctccatg
cagttcccctacaacccgctaaccatgcgcatgctgagtagcacaccaccctcctccata
acgtgtgcttcaccttcacttcaagcccagcagcagcagccatcacagtcacagacaccg
ctccagcaggggcagccaggcaatgtgccccagtcacgcgtgtgggagcgggagccgctg
ctttcggagcagtacgagaccctgtcagacagtgacgactga
DBGET
integrated database retrieval system
