Scleropages formosus (Asian bonytongue): 108936181
Help
Entry
108936181 CDS
T04919
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04142
Lysosome
sfm04144
Endocytosis
sfm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108936181 (cltc)
04142 Lysosome
108936181 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108936181 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108936181 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108936181 (cltc)
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108936181 (cltc)
Exosome [BR:
sfm04147
]
Exosomal proteins
Proteins found in most exosomes
108936181 (cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
108936181
NCBI-ProteinID:
XP_018610866
UniProt:
A0A8C9S1L0
LinkDB
All DBs
Position
4:15246645..15282321
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPNN
PIRRPISADSAIMNPASKVIALKASKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQALTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRRDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAASHSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRSVNFFT
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
GKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGTPQLMLTAGPSVAVPPQQAYGYGYTAPPAYGQHPQPQP
GFGYGM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccatccgcttccaggagcacctccagcttcaaaacctgggaata
aatccagccaacattgggttcagtaccctgactatggagtcggacaagttcatctgcatc
cgggagaaggttggagagcaggcgcaagtagtgatcatcgacatgaatgaccccaacaat
cccatccgcaggcctatctctgcggacagcgccatcatgaaccctgccagcaaagtcatt
gcactgaaagcatcaaaaaccctccagatcttcaatattgagatgaagagcaaaatgaag
gcccataccatgacagatgatgtcaccttctggaagtggatctccctcaacacagtggct
ctagtcacagacaatgctgtctaccactggagcatggaaggagactctcagccagtcaaa
gtgtttgaccgccactcaagcttggctggctgtcaaataatcaactaccgtactgatgcc
aaacagaagtggctgcttctcattggcatttcagcacagcaaaaccgtgttgttggtgca
atgcaactgtactcggtggacagaaaggtgtcccagcccattgagggtcatgctgcaggc
tttgctcaattcaaaatggagggaaatgcagaggagtccactctcttctgctttgctgtt
cgtggccaggctggaggaaagctgcacataattgaagtggggactcctcctacggggaat
cagccttttcctaagaaagcagttgatgtgttctttccacctgaggcccagaatgacttc
cctgttgcaatgcagataagctccaagcaggatgttgtgtttctcatcaccaaatatgga
tacatccacctgtatgaccttgagacgggcacctgtatctacatgaatcgaatcagtggt
gagaccatctttgttacagcccctcatgaagccaccgctgggatcattggggtcaacaga
aaaggacaggttctctctgtgtgtgtggaggaggagaatatcatcccctacattacaaac
gtgctacagaaccctgacctggctctgcgcatggctgtacgcaacaatctagctggtgct
gaagagctctttgctcgcaaattcaacaatctctttgcaggagggaactactctgaggca
gcaaaggttgcagctaatgcaccaaagggaattctacgcaccccagataccatccggcga
ttccaaagcgtgcctgcccagcctggccagacctcccccctgctccagtacttcggcatc
ctgctggaccaaggccagcttaacaagtttgagtccctggagctatgtagacctgtcttg
cagcaaggccgcaagcagctgttggagaaatggctgaaagaagacaaacttgaatgctca
gaggaactgggggatctggtgaaatctgtggacccaactctggctctcagtgtctatctg
agagcaaatgtccccaacaaagtcatccagtgttttgctgagactgggcagtttcctaaa
attgtactgtatgccaaaaaggtgggctacaccccggactggatcttcttgttgaggaat
gtgatgcgcattagcccagagcagggcctacagttttcccaaatgttggtccaggatgaa
gagccacttgctgacattacacagattgtggatgtgttcatggagtataacctgatccag
cagtgcacctcctttctgttggatgcacttaaaaacaaccggccatctgagggacctttg
caaactcgccttctggagatgaacctaatgcatgccccacaggttgcagatgccattcta
gggaaccagatgtttaccaactatgaccgtgctcacattgcccagctgtgcgagaaggcg
ggactgctgcagagagccttggagcactacacagacttgtatgacatcaaacgagcagtg
gtccatacccatttgctgaaccctgagtggctggtaaacttctttggctcgctgtctgtg
gaggattcccttgagtgcctgagggctatgctgtcagccaacattcgccaaaacctgcag
atctgtgtccaagtggcctccaagtaccatgagcagttgtccacccaggccctgactgaa
ctgtttgagtccttcaagagctttgagggtctgttctacttcttgggttctattgtaaac
ttcagccaagaccctgaggtccacttcaagtacattcaagcagcctgtaaaacgggccaa
atcaaagaggttgaaaggatctgccgagagagcaattgctatgatccagagcgggtgaag
aacttcttgaaggaggctaagctgacagaccagctacccctcatcattgtgtgtgaccgg
tttgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaaatacata
gaaatctatgtgcagaaggtgaaccccagcagacttccagtagtgattggtgggcttctg
gatgtggactgctctgaggatgttatcaagaatctcattttggtggtgcgaggccagttc
tccactgatgagctggtggctgaagttgagaagaggaacaggctgaagctcctgcttcct
tggttggaggcccgcatccatgagggctgcgaggagccagccactcacaatgccttggcc
aagatctacattgacagtaacaacaacccagagcgcttcctgcgggagaacccatactat
gacagccgtgtggtgggcaagtactgtgagaagagagaccctcacttggcctgtgttgct
tatgaacgaggacagtgtgaccaagagctcattcatgtctgcaatgaaaattccctcttc
aagagtctgtcccgctacctggtacgtcgtcgagaccctgagctgtgggctagtgtgttg
ctggagagcaacccctacagaaggcctcttattgatcaggttgtccagactgctctgtca
gaaacgcaagacccagaagaggtgtctgtcacagtcaaggccttcatgactgcagacctt
cccaatgaactcattgaacttttggaaaagattgttttggataattcagttttcagtgag
cacagaaatctacaaaacctcctcattcttacagctattaaagctgacaggactcgtgtg
atggagtacatcaaccgtttggacaattatgatgccccagatattgcaaacattgcaatt
agcaatgaactgttcgaggaagcctttgcaattttcaggaagtttgatgtcaacacctct
gcaatacaagttctcattgagcatattgggaaccttgatcgggcctatgaatttgctgag
cgctgcaatgagccagctgtgtggagccagctggctaaggcacagctgcagaagggcctg
gtgaaagaagccatcgactcctacatcaaagctgatgacccctctgcctatatggaggtg
gtgcaggcagccagccatagtggaaattgggaggatctggtgaagttcctgcagatggcc
cgcaagaaagctcgtgagtcgtatgtggagactgagctaatatttgctctagccaaaacc
aaccgcctggctgagcttgaggaattcatcaatggaccaaacaatgctcacatccagcaa
gttggtgaccggtgctatgatgagaaaatgtatgaagccgctaagttactgtacaacaat
gtttccaactttggacgattagcttctactctggtccaccttggagaatatcaggctgcg
gtggatggggcccgaaaggctaacagcacacgcacatggaaggaggtgtgctttgcctgt
gtggatggcaaggaattccgtttagctcagatgtgcggccttcacattgtggtccatgct
gatgagctggaggagcttatcaactattaccaggaccgtggctactttgaagaactgatc
accatgttagaggctgccctggggctggagagggctcacatgggtatgttcactgagctg
gcaatcctctactcaaagtttaagccacagaagatgagggaacacctggagctcttctgg
tcccgtgttaatattcctaaggttttgagggctgctgaacaggctcacttgtgggcagag
ttggtgttcctgtatgataaatatgaggagtatgacaatgccattatcaccatgatgaac
cacccaacagatgcttggaaagaaggacagtttaaagacattatcacaaaggttgccaat
gtggagctttactataaagcagtccagttctacttggagttcaagcctctgctcctgaac
gatctgcttatagttctgtccccacgacttgaccactctcgttctgtcaacttcttcacc
aaggtcaaacaactgccactggtaaaaccttacttgcggtctgtacagaaccacaacaac
aagtcagttaatgaggcactcaacaatcttttcatcacagaggaagattatcaggctctg
cgaacatccatagatgcgtatgataacttcgataacatctccctggctcagcgcttggag
aagcatgaactcattgaattcaggagaattgctgcctaccttttcaaaggcaacaaccgc
tggaagcaaagtgtggagctttgcaagaaggacaaactctacaaggatgccatgcagtat
gcatcagagtccaaggatacagagttggcagaggagctgctccagtggttcctgcaggag
gggaagaaggagtgctttgctgcatgcctgttcacatgctatgatctactgcggcctgac
gtggttttggagacggcatggaggcacaacatcatggacttctccatgccctatttcatc
caggtcatgcgggagtatctgaccaaggttgatgcaattaaggaaaaggtggacaaactg
gatgcctcagagtcactgaggaaagaagaggagcaggctacagagactcaacccatcgtt
tatggcacaccccaactgatgctcactgcagggcccagtgtggctgtccctccacagcaa
gcttatggctacggctacacagcaccacctgcctacggccagcaccctcagccccagcca
ggctttggctacggcatgtaa
DBGET
integrated database retrieval system
