Scleropages formosus (Asian bonytongue): 108936190
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Entry
108936190 CDS
T04919
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108936190
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Cadherin related
108936190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
CADH_Y-type_LIR
TMEM154
TCL1_MTCP1
Motif
Other DBs
NCBI-GeneID:
108936190
NCBI-ProteinID:
XP_018610897
UniProt:
A0A8C9UZM7
LinkDB
All DBs
Position
4:23675854..23762865
Genome browser
AA seq
3287 aa
AA seq
DB search
MKMMLKGPGEAVISQLKQHGTCNKKVLLLLYVALELIVVHSSAVLGTLNLQLDEEQPAGT
IVGDINAGLPQGTTATLFFISDVEGTGVGTDLNIDETTGIIKTNRVLDREVRDHYSFIAV
TMTGVTVEVSIQVNDINDHAPQFPRERVVLRIPEHTAVGTKFSLDPASDADKDQLTTQGY
LIKDGNVGQAFRLESKRGSNMVLYLDLVVNAVLDREKRSSYSLILESFDGGSPRKTGQMI
LDVSVQDINDHAPVFNQSRYHAIISESMQPGSNILQVFASDEDEGDNGLVLYEINRRQSD
PENYFVVDPRSGMITLNKPLDYEMRKVHELVVQARDNASQPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPRISEGAQPGQYVARISVSDPDYGEYANVNVSLEGGDGKFALTTKDSI
IYLIYVDQMLDREERDSYELRVMATDSGTPPLRAESSFTIQVTDINDNPPLFDQQAYKQA
IPEVVFPGSFVLQVTARDKDQGSNGEVHYSILLDPGTHSNWFTIDPVTGIITTATELDYE
TDPRPQIKVVATDGGRPSMSSTAVVDIILQDMNDNEPVFGSNFYNVSLSENTAAGTCFLE
VTATDADGGSYGTVSYSIGSGIGMAVPAQFTIDKETGQLCTTMDLDRDQGPASYDFTVTA
VDGGGLNSMTYVKVSLVDINDNNPTFYPVHYAVSLSTQSTPGTSVVRVTANDPDAGANGK
VTYRTTPDGSSPYFTLNKDTGVISLSRSLHGKANSVISMVITAQDGGGLTALVNAQVNIS
VVAGSVAPPMFEQVQYFFTVSEDVLRGTEVGVVRAISRNDVSRDISYTISGGDPEGYFTV
DPHTGALRTSRPLDHETRPSLELEVQARSGSPPAFGQTRVHISVADVNDNAPTFLPSSSE
SLLLPEATRMGTVVYRVRAEDPDSGPFGQLSFDLVSPSGQRTFGVERSNGEIRLIGTLSY
ENTPRYDLLVMARDGGTPQLSATFTLVVHVQAEDDQGPVFDTLTYRVELKESTPLSTHFL
QVRALSREAAGTGGSTPSGPLAYHLRPDGDAAGFGIIPDSGWLFVKSALDRETKDLYLLT
VLATSGSGQLKKTGSATVRVSVTDENDNAPRLTQERVFLAVRENLPPGTGFGRVSATDRD
AGLNSRLTYRLLHADRNFQINSQTGEISTRTALNRELQSSYQLVVVVQDGGTPPRSATGT
AHVTVLDENDNAPAFVQVQPGRELVLQVQEGQPSGFLIGTLHAKDPDEGENGTVFYSLSG
SRAERFSLNPSTGELRTASPMSRTERAEYSLTLTATDRGVPPQSTDCALRIQVLMSSKTS
PKTTSLSMTLNSVEGAKPGSIIGSVRSHDHQKGQITYLVVGGTDRDGTFMVDHQTGDVYL
VRELDFEHGARYTLQIEVDDFSQVYPSSHLVHLDINVQDSNDHAPQFPEDPITIVIPENM
PPGSSVYTFQAVDKDGSGHNSEIRYSIQHRWPNSPDLLSLDPFIGVLTVTQGLDHETIPS
LYLVVHATDSAPDVAQRRWGSVTARIFVTDENDNEPIFSSPAAVSVMEDQPVGFVVLYVM
ARDADQGENGRVSYRIQAGNTGGRFSLNPNTGSLSILKALDREEQSLYNLTIVAEDHGMP
PCSTSQLLSVQVIDVNDESPWFEKTEFEAQILENQRPGTTVLTVFASDRDQGTNGQVTYG
GISEEGFAIDPVTGVIIATKALDREVQDRYAFTVYAKDGGIPANFATAMVRITVLDENDN
APAFGRLFYNLEVPENLEPVELSTLRATDQDTGDSGEVEYRIIAGDPDSDFSLDSSSGEL
SSSRALDREKKPSYLLTVVAQDRGTPPLTSTATVEVTLLDINDNSPRFERDSYTVDVSED
VVVGSPLLEMTATDADEGLNGKVLYFLSPDSMGAFAIDQDTGRITIAAVLDREKRAFYSF
QVWAVDSSPAVPHNSTAQVTVNVLDVNDNAPFFVQDPLVINISSGSVSSHQVVATMKAED
KDFGANGSVFYRFANPVQGFTINSLTGAIQVAENLQSLNQHQRTLIVEAVDQGSPAQSSL
GVVIIYIREEEYKGIRFSRTARDISLQENAAKGTTVVQELAQYLEGSRKGITYSIFSGNR
MKSFSISATTGEIQVQSSAGLDYEDTPKIRLVVKAETSTSNSYMAINLILQDVNDNLPRF
QLQNYIAYMREAQGYDLPIIQVLANDPDQGPNGQVTYSIKSSSMSGLFKINPSTGGITTA
AIMDREIWTQTKLVVTATDRGNPRLVGSATLTVIIVDLNDNSPTIPLPQEIRVPENTLIG
TEITQVTGNDVDSGPALSYSLLLDGYSSGKFGIHRYGGGVSLTGLLDFEERTWYTLTIRA
SDSQHQSEANLTVLVEDINDNAPTFTQDLYQVTLPEHSPPGSPVVTVTATDRDSGMNGKV
TYRVMSSTRDGFYIDPRNGTLFISRKAEFDPEHPSVSVVIEARDGGTPALSSVTTVQVHL
SDVNDNAPTFHQSEYRATISEDILPGATILTLEAVDTDMSRENCGFDFAIASGNVGNAFQ
IESSVRYLEGRGFQTVGTLILAERLDFESASRYNLTIVVSDRGVPQRSSSVAAVINVADA
NDNPPVFSRAEYSVALSEGAVAGTEILRLTATDPDSTPNAEIQYTISSGDEMELFSVDQW
TGALRLRQSLDRERQSSHVVIVQASDGLGHFALVPVIVEVKDINDNRPYFPIQTLTASIR
ENQPPNTLVTVLHAIDYDKGIYGQLQYSMVEKSGEGRDFFLVDQNTGEVRARITFDYEKV
KSFNFIALAMDAGNFSASVTVQIYVTGEDEYDPLFTSPTFSFEVPEGAKKGQSIGQVQAS
DEDSGVDGIILYSFPSPSPYFDVNRTTGVVFLKMDSSSRHSGTGRSKREARLMTLDVAAH
SPLDTSRVATAQLTIDVTYTSFGLAPDVNILLIVVIAVSLGVIIILVIIAVVLFLVKARQ
RKKGQGANNRASSPQGTALQKLDDTAGGDRIYHQTLPGYAGDQGGAGGGPYARGGSLDPS
HSSGRGSAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPDSGIQQDADQLSDISCEPG
VLEAGQWFKGKKLGSLSGTLLSGQHPIYRDEGGGYLGVGRGLNISHPKDYAFPEDGKPSV
DGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDESAPPSNPRQPFQAK
AKADPKPRIDPPPLITSVAHPGAKSVPPKPAVARTFPHLASLRRSPISHEGSISSAAMSP
SFSPSLSPLAARSPAVSPFGVTQGPSASMISTAEHSLEHSEEPELRI
NT seq
9864 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgttgaaaggaccaggggaggcagtgatcagtcagctgaagcaacatggg
acctgcaacaagaaagtgttgctgctgctctatgtggccttggagcttattgtagttcac
tcatcggctgttctggggacactgaacctgcagctagatgaggagcagccagcaggtacc
attgtgggtgacatcaatgcaggcctgccacagggcactacagcaacactcttcttcatc
tcagacgttgagggcacgggtgtgggcactgacctgaacattgatgaaaccactggcatt
atcaagaccaaccgtgtcctggaccgggaggtgagggaccactacagcttcattgccgtc
accatgactggtgtgacggtagaggtgtcgatacaggtgaatgacattaacgaccatgct
ccacagttcccccgggagagggttgtcctcagaatcccagagcacacagcagtagggaca
aagttttcattggaccccgcatctgatgcagacaaagaccaactgaccacccagggctac
ttgattaaagatgggaatgtgggacaggctttccgcttggagtccaagagagggtcaaac
atggttctttaccttgatctggtggtcaatgctgttctggacagagagaaaaggtcctct
tattctttaattctggaatcgtttgatgggggctctcccaggaagacaggacagatgatt
ttagatgtgtctgtccaggacattaatgaccatgctcctgttttcaaccagagtcgctac
catgccattatctcagagagcatgcagccaggcagtaacattctccaagtatttgcatct
gatgaagatgaaggtgacaatgggctagtgctgtatgaaatcaacagaaggcagagtgac
ccagaaaattactttgttgtggatccccggtctggtatgatcacccttaacaagcccctg
gattatgagatgaggaaagtccatgagttggtagtgcaagcccgggacaatgccagtcag
ccagaggttacaaatgcatttgtcactatccatgtacgcgattacaatgacaaccagccc
accatgaccataatcttccttagtgaggatggctccccccgtatttcagaaggtgcacag
cctggtcaatatgtggcaaggatctctgtctcagacccagactatggggagtatgccaat
gttaatgtgtcccttgagggaggagatggaaagtttgctttgactaccaaggatagcatc
atttaccttatttatgtggaccagatgcttgaccgagaagagagagactcctatgagctg
cgggttatggctacagactcaggcacaccacctcttcgggccgagtcttccttcaccatt
caggtcactgacatcaatgacaaccctcctctctttgaccagcaagcctacaaacaggcc
atcccagaggtggtgttcccagggagctttgttctacaggtcacagcaagggacaaggac
cagggctccaatggggaggtccactacagtattctcctagaccctggtacccactctaat
tggttcactattgacccagtaacggggataatcaccacagcaacagagctggattacgaa
acagaccccagaccccagataaaagtggtggccactgatgggggcaggccgtctatgtcc
tccacagctgtagttgatatcatcttgcaggatatgaatgacaacgaaccagttttcggg
agcaacttctacaatgtatccctcagtgagaacacagctgcaggaacctgttttcttgag
gtgacagcaactgatgcagatgggggctcttacggcaccgtatcttactctattggttct
ggcattggaatggctgtgcctgcccagttcaccattgacaaagagactggccagctctgt
accactatggatctggaccgggaccaaggcccagctagttatgacttcacagtcaccgca
gtggatgggggtggcttgaattccatgacctatgtgaaggtttcccttgtggacatcaat
gacaacaacccgaccttctatccagtgcactatgctgtcagtctgagcacacagagcaca
ccaggaacctccgttgtacgggtgacagccaatgatccagatgcaggagccaatgggaaa
gtgacctaccggacaactccagatggcagctcaccctacttcactctcaacaaggataca
ggtgttatctccttgtctcgctccctccatggcaaggccaattctgtcatctccatggtg
atcactgcacaggatggaggtgggttgacagcactggtcaacgcccaggtgaacatcagt
gtggtcgctggttcggtggcgccccccatgtttgagcaggtgcagtacttctttaccgtg
tcagaagacgtccttcgtgggacagaggtgggcgtcgtgagggccatcagcaggaacgat
gtctccagagatatctcctacaccatttccggtggtgatccagaaggctacttcacagtg
gacccgcatactggtgccctgcggactagccggccactagatcatgagacgcggccctct
ctggagctagaggtgcaagctcgcagtggctcaccacctgcatttggacagacgcgtgtg
cacatcagtgtggccgatgtcaatgacaatgctcccaccttcctaccctcctcttctgag
tcactgctgctgcctgaggccacgcggatgggcacggtggtgtaccgtgtgcgggcagaa
gatcctgactcaggcccctttggtcaactcagcttcgatctagtgtcgcccagtggccag
cgcaccttcggagtggagcgcagcaatggcgagatccgcctgattggtacactatcgtat
gagaacactccacgatatgacctgctggtgatggcacgggatggtgggacaccacagttg
agtgccaccttcacgctagtggtgcacgtgcaggctgaggatgaccagggccctgtcttt
gacactctcacataccgtgtggagctgaaggagagcacaccactcagcacccacttcctg
caggttcgagcactgagccgtgaggctgctgggacaggaggctccactccttctggccca
ctggcataccatctgcgtcctgatggtgatgcagctggcttcgggatcatcccagatagt
ggctggctgtttgtgaagagtgccttagatcgtgagacgaaagacctgtacctactgaca
gttttggccacctcaggcagcgggcagctcaagaagacggggagtgccactgtgagagtg
tcagtgacagatgagaatgacaatgcaccacggcttacgcaggagcgggtattcctggcc
gtgcgggagaacttgccacctggcactggcttcgggagggtgtcagccactgatcgagat
gcaggcctaaacagtcgactcacataccgtctgctgcatgctgacagaaacttccagatc
aactcccagacaggggagatcagcacacggacggccttgaaccgcgagcttcagtccagc
taccagctggtggtggtggtgcaagatggtggcacgcccccccgaagcgccacagggacc
gcccatgtcacagtgttggatgagaacgacaatgcacctgcttttgtacaggttcaacca
ggacgggagctggtgttgcaggtgcaggaaggccagccctctggctttctaattgggaca
ttacatgccaaagatccagatgagggagaaaatggcactgtcttctactcgctatcaggc
tctagagctgaacgtttctccttgaatcccagcactggtgaacttcgcactgcctccccc
atgagccgtaccgaacgggctgagtacagccttactttgacagctacggaccggggggta
cccccacagagtacagactgtgcccttcgcatccaggttctcatgtccagcaaaacttct
ccaaaaaccacctccctatccatgaccctcaactcagtggagggagccaaaccaggctcc
atcattggttctgttcgctcacatgatcaccaaaagggccagataacctacttggtggtg
ggtggcacagaccgtgacggcacattcatggtggaccaccagactggcgatgtgtaccta
gtacgagaactagactttgaacatggagctcgctacactttacaaattgaggtagatgac
ttctcacaagtttatcccagcagccacctggtccatttggacataaatgtgcaggacagt
aatgaccacgcaccccagttccctgaggaccccatcaccattgtcatcccagagaatatg
cctcctggatcatctgtctacactttccaggcagtggataaagatgggagtggacacaac
agcgaaattcgctactccatccagcaccgctggcccaacagcccagaccttctgtctttg
gatccattcattggggttctgactgtcactcaggggctggaccatgagaccattccctct
ctctacctagtagtacatgccaccgactctgcccctgatgtggcccagcggcgctggggt
tcggtgacagcccgtatctttgtgacggacgagaatgacaacgagccaatttttagctca
ccagctgctgtcagcgtcatggaagaccagcctgtgggctttgtggtgttgtatgttatg
gcccgcgatgctgaccaaggcgagaatggacgcgtatcttaccgcatccaggcaggaaac
actggagggagattcagcctcaatcccaatacaggctctctgtctatccttaaggccctg
gaccgtgaagaacagagcctctataacctaaccattgtggctgaggaccatggaatgcca
ccgtgctccacttcacagctgctgtctgtccaggtgattgatgtcaatgatgagtccccc
tggtttgagaagactgaatttgaggcccaaatcctagagaaccaacggcccgggaccact
gtgcttactgtgtttgcctcagatcgggaccaagggactaatggtcaggtgacctatgga
ggcatttcagaggagggatttgccattgaccctgtgacgggtgttatcattgctaccaaa
gcccttgacagggaagtccaggaccgctatgcttttacagtctacgcaaaagatggtggt
attccagctaactttgccacagcaatggtgaggataacagtgttggatgagaacgataat
gcacctgcttttggaaggcttttctacaacctagaagtgccagagaacctggagcctgta
gagctgtccaccttaagggctactgaccaggatactggagacagtggagaggttgagtac
aggatcatagctggggaccctgacagtgactttagtcttgacagcagctcaggggagctg
tcctcttctagagcccttgatcgagaaaagaaaccaagctatttgctcactgtggtggcc
caggaccgtgggaccccaccactcaccagcactgccactgtggaagttaccctccttgat
atcaatgacaacagccctaggtttgagcgtgacagctacacagtggatgtctcagaagat
gtggtagtagggtctccactgctggagatgacagctacagatgctgatgagggtctcaat
gggaaggtgctgtacttcctgagcccagattctatgggcgcctttgctattgaccaggat
acagggcgcattacaatagcagcagtgctggaccgggaaaagagggccttttacagcttc
caggtatgggctgtggattcttcccctgcagtcccacacaacagtacagcacaggtcacc
gtcaatgttctggatgtgaacgacaatgctcccttctttgtccaagacccattagttatc
aacatctccagtggcagtgtctctagccaccaggtggtggccactatgaaggccgaggac
aaggactttggggccaatgggtctgtcttctatcgctttgccaatcctgtgcaaggcttc
accatcaactctctgacaggagctatccaagtggcagagaatctgcaatcactcaatcag
caccagcgaaccctgattgtagaggctgtggatcagggcagtcctgcccagtcatccctc
ggagtagtgatcatctacatcagagaggaagagtacaagggcattcgcttctcacgaaca
gcccgggacattagtcttcaggagaatgcagctaaaggtaccactgtggttcaggaacta
gcacaatacctagagggctcgcgcaaaggcattacctatagcattttcagtggcaaccgg
atgaagtcattcagcataagtgctactacaggtgaaattcaggttcagagctctgctggc
ctcgactatgaggatacccccaaaatccgtctggtggtgaaggctgagacatcaacctcc
aactcctacatggccattaatctgatcctgcaggacgtcaacgacaacctcccacgcttc
cagctacagaactacatagcatacatgcgcgaagctcaaggctacgaccttccaatcatc
caggttttggctaatgaccctgaccagggtccaaatggtcaggtgacctactccatcaaa
tcatccagcatgagcggcctcttcaaaatcaacccctcaactggcggtatcactacagca
gccattatggatagagagatctggacacagacaaaacttgttgtcacggcgacagaccga
ggtaatcctaggttggttggctctgcaaccctcacagtaatcattgtggaccttaatgac
aacagccccacgatccccttaccacaagagatccgcgtgcctgagaacaccctgattgga
acagagattacgcaggtgaccggcaatgatgtggattctggcccggccttgtcctactct
ctgctactggatggctactctagtggaaaatttggaattcatcgctatggtggaggagtg
tccttgactggcctattggactttgaggagcggacttggtacactttgaccatccgtgcc
tctgactctcagcatcagagtgaggccaatctgaccgtccttgtggaagacattaatgac
aatgcaccaaccttcacccaagatctctatcaggtaacactgcctgagcattctccacca
ggcagtcctgttgtcacagtgactgctacagatcgtgattctgggatgaatgggaaggta
acctacagagtaatgtcatcaaccagggatggcttttacatcgaccccaggaatggcact
ttgttcatcagtcgtaaggcagagtttgatccagagcatccctcagttagtgtggtgatc
gaggcaagggatggtggcaccccagcgctgtcatctgtcaccactgtccaggtgcatctc
tctgatgtaaatgacaatgccccaacattccatcagtcagaatacagggcaacaatatca
gaagatattctgcctggtgccaccattctcaccctggaagcagtggacactgacatgtca
cgggaaaactgtggctttgactttgccattgcaagtggcaatgtgggcaatgcctttcag
attgagagcagtgtacggtacttggagggacggggcttccagacagtgggaaccctgatt
ttagccgaaagacttgacttcgagtcagcatcacgctacaacctcaccattgttgtgtca
gatcgtggcgttccccagcgcagttcaagcgtagcagcggtgatcaatgttgctgatgcc
aatgataaccctccagtcttcagtcgtgcagaatacagtgtggcgctgagcgagggggca
gttgctggcacagagattttacgtctgactgcaactgacccagattctacccccaatgct
gaaattcaatacaccatcagctcaggagatgaaatggagctcttttctgtggaccagtgg
acaggagcccttcgacttaggcagtcactggaccgcgagcgacagtcttcccatgtagtc
attgtacaggcttctgatggccttggtcactttgccttggtccctgttattgtggaggtg
aaagatatcaatgacaacagaccttatttccccatccagacgttgacagcaagcattcgt
gaaaaccagcctccaaacactctggttactgtactgcatgccattgactatgacaaggga
atttatggccagctgcagtattccatggtggaaaaatcaggtgagggcagagacttcttc
ctagttgatcagaatacaggggaggtaagggccaggataacttttgactatgagaaggtg
aagtctttcaacttcattgcccttgccatggatgctggaaacttttcagcttctgtcacg
gtacagatttatgtgacaggggaggatgagtatgacccactctttacttcaccaaccttc
tcttttgaagtgccagaaggggcaaagaaaggccaaagcattggccaggtacaagcaagt
gatgaggacagtggtgtagatggcatcatcctatactcttttcccagcccatcaccctac
tttgacgtgaatcggaccacaggagtagtctttctgaagatggatagctccagtcgtcac
agtggaacaggccgctctaaaagagaggcccgactaatgacactggatgtggcggcccac
agccccctggatacctcacgtgtggccactgcacaactaaccattgatgtcacatatact
tcctttgggcttgcgcctgatgttaacatcttgctaattgttgtcattgctgtttccctg
ggcgtcattattatcctggtgataattgctgtagtgttgttcctggtgaaggctaggcaa
agaaagaaggggcaaggggccaacaacagggctagctctccccaaggaacagctctgcag
aaattggatgacactgcaggaggtgatagaatctaccaccagactcttcctggctatgct
ggagatcaaggtggtgctggtgggggaccctatgctagaggagggtcgctggacccctcc
cattccagtggaaggggttctgctgaggctgccgaggacgatgaaatacggatgataaac
gaatacccacgtgtctccagcatctcctcctccatgcaggagcacatctcagcacgaggt
ccagactctggtatccagcaagatgctgaccaactctcagatatttcctgtgaaccaggg
gtattggaggcaggccagtggttcaagggaaagaaattaggaagcctcagtggaactcta
ctatctggtcagcatccaatctacagggatgaaggtggaggctaccttggggttggaagg
ggcctaaacatctcacaccctaaggactatgccttccccgaggatgggaagccctctgta
gatggctccctcactgccattgtagccagtgatgaggagctacgcggtagctataactgg
gactacctgctcaactggtgccctcagttccagcccctggctaatgtctttacagagatt
gcccggttgaaagatgaaagcgctcctcccagcaatccccgtcagcccttccaggccaaa
gctaaggctgaccctaaaccccggattgatccaccacctcttatcacctccgtggctcac
ccaggagctaagtcagttcccccaaagccagctgtcgcacggacgttcccacacttggca
tcattgcgacggtcacccatcagccatgagggctccatctcttcagctgccatgtcccct
agcttctccccctcattgtctccgcttgctgcccgctcgccagctgtctccccttttggg
gttacacagggcccctcagcctcaatgatcagcacagcagagcactctctggagcacagt
gaagagccagagctaaggatctaa
DBGET
integrated database retrieval system