Scleropages formosus (Asian bonytongue): 108936262
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Entry
108936262 CDS
T04919
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108936262 (scaf4)
03041 Spliceosome [BR:
sfm03041
]
108936262 (scaf4)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108936262 (scaf4)
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
108936262 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
ATP_sub_h
Motif
Other DBs
NCBI-GeneID:
108936262
NCBI-ProteinID:
XP_029107205
LinkDB
All DBs
Position
4:complement(23549853..23567975)
Genome browser
AA seq
1088 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMISITKSAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVVDSIVRQSRHQFGADKDVFGPRFTKNITGTFENLCLCPTEDRSKIVRVLNLWQKN
GVFKIDVIQPLLDMAAGTSSSAPVTDVDHEGPDGGSPSTPVKAPADPLPSVPTNSIVAAV
PQLQNSDAFAAVAQLFQSSQGQQLQQMLQTFQQPGKPQSPALENNMMAQLQAASAPLAQI
AQHASLTQHTPVGPQPVVQKAAFDKKLLDRFDYDDEPEGIEDTKKDELTTVTSVTTASTT
TVSAVPQVFPVALQQPVYQQLAAQNPHTEHFQGPLLGMPQDPTHQVSLPPNGQLQGYSLI
PPQSYPGMMPQMGQTLLPQQATGLPPGFPAGYPPQNEAYAQHMAQQPQEVSMEIDPPQME
GKHRSDGRRSRSRSGSRSPKRRRSRSNSRNRRSRHRRSRSRSRDRRRHSPRSRSQERRDR
ERERERRQKGLPHIKSETLSVCSTTLWVGQLDKRTQQQDVACLLEEFGQIESINMIPPRG
CAYIVMVHRQDAFRALQKLSRGSFKVNQKAIKIAWALNKGIKPEYKQYWDIELGVTYIPW
SKVKVDDLDSFCQGGMLDPETLCPEWKTSQNDLDKPEEVAQNGRSDSAQAEENPASGAVQ
VQPSVQSMGTVGSLQPPSFPTHMGLPPPAFPPGVPPPPPPPFMRPGFNPMQMPPGFLPPS
AMPPMGSTGPPPPASSVNMPSSTVPGSSAEEPSKDPSSTVGTRNTGDAVDGSKLYGSVPG
MSQASSLPGSVPQPIAGMGNQVGAPAGPPSGGLLGARPGMIPLQRPPGVPPPHMQRFPLH
PPRPNMPPMPPQMMHRGPPQMMHREPPPGGYGIPPPHPIRGPFPPHGPPFIRPGGPRGPE
VPDDREGRPFRSERPGFGRDREQERFGGRRPPYGSGGSGSEGRSGERPEGRERFANRHEE
FEQRGGWERDRRDWGRSPEHERGREVEDRGRRASGHRDREPGTRERSTRWDRDDRREKVD
EVDGADRYRDSNSTDAPANSDKELTQPESEGLPGPEPLAPSTEVTADLVASVAPVSTEPA
EKPQEAES
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcgttcaaccaggagttattctccttaatggacatgaagcctccc
atttctcgagcaaagatgatatcgataacaaaatcggctataaaggctataaagctgtac
aagcatgttgtccaaattgttgaaaagttcatcaaaaagtgcaaaccagaatacaaagtt
ccagggctctatgtggtggactccatcgttcgacagtcacgacatcagtttggggcagat
aaagatgtatttgggcccaggttcacaaaaaacatcacagggacatttgagaacctctgc
ttgtgtcccactgaagacaggagtaagattgtacgggtgctgaacctttggcagaagaat
ggggtatttaagattgatgtcatccagcccctactggacatggcagctggtacaagcagc
agcgccccagtgaccgatgtggaccacgaaggcccagatggcggatccccctccactcca
gttaaggcacccgcagatcctcttccctcagtccctaccaactctattgtggcagctgtt
ccacagctgcagaactcagatgcctttgctgctgtggcacagttgttccagtcttctcaa
ggacagcagcttcagcagatgcttcagacgttccagcagccagggaagcctcagtcccca
gcactggagaacaatatgatggcccagctccaggctgccagtgctcctcttgcccagatt
gcccagcatgcctcactcacccagcacaccccagttggtccacagcctgtggtgcagaaa
gctgcctttgacaagaagcttctggatcgctttgactatgacgacgagcccgaaggcatc
gaggacaccaaaaaggatgaattgacgactgtcacttctgttactacagcctcaaccaca
actgtctctgctgtgccccaagtgtttcccgtggccctgcagcagccggtgtaccaacaa
ttagctgcacagaacccccacacggaacactttcagggaccattgctgggaatgccacag
gaccccacccatcaggtttccctaccccctaacgggcagctccaaggctatagtcttata
cccccacagtcgtacccagggatgatgccacagatgggtcagactctcctaccccagcag
gcaactggcctgccaccaggtttccctgcgggataccctccacagaatgaagcctatgcc
caacacatggcccagcagccccaggaagtgtcaatggaaatagaccccccacaaatggag
ggaaagcaccggtccgatggcaggagatctcgatcacgttcaggctccagatccccaaag
agaaggcgttcccggtccaactcccgcaatcgcaggtctcgccacaggcgatcacgttcg
cggtccagggaccgccgacgccactcaccccgctctcggtcacaggagcggagggatagg
gaacgggaaagagaacggcggcaaaaggggctgccccatatcaagagtgagacccttagc
gtgtgcagtacaactctgtgggtgggccagctggacaagcggacacagcagcaggacgta
gcctgcctgctggaggagtttgggcagattgagtcgatcaacatgattcccccacggggt
tgtgcatatattgtgatggtccacagacaggacgcctttcgtgccctacagaaactcagc
aggggatccttcaaagtgaaccagaaagccattaagattgcatgggccttgaacaaaggg
atcaagccggagtacaagcaatattgggacatcgaactgggtgtcacctatatcccatgg
agcaaagtcaaggtcgatgacttggacagcttctgtcaggggggcatgctggaccctgaa
acactttgtccagaatggaagacctctcagaatgacttggataaaccagaggaggtggca
cagaatggccgctcagactctgcacaggctgaggagaacccggcttctggcgccgtccag
gtacagcctagtgtccagtccatgggaactgtaggaagccttcagcctccatcctttccc
acacacatggggcttccaccccccgccttcccaccaggagtgcccccacctcccccacca
cccttcatgcgtcccggattcaaccctatgcagatgcctccaggattccttccacctagt
gccatgccccccatgggttccacaggaccccctccacctgcttcatctgttaacatgcct
tcttcaactgtgcctggcagttcagccgaagagccctccaaggacccttccagtaccgtg
ggaaccaggaacactggagatgctgttgatggctccaagttgtatggctctgtcccaggg
atgagccaggcgtctagcctgccaggatccgtgcctcagccaatcgccggaatgggtaat
caggtgggtgctccagcaggtccaccatcaggtggacttctgggtgccaggcctggcatg
attcccctgcaacgccccccaggagtcccaccccctcacatgcagcgcttccctctgcac
cctccacggcccaacatgccacctatgcctccgcagatgatgcacaggggccctccccag
atgatgcatcgagaacctccacctgggggttatggcataccaccaccccaccccatcagg
ggacccttccccccccatgggccccccttcatacgcccagggggtcccaggggcccagag
gtgcctgacgaccgggaaggcaggccatttagaagcgagcggcctgggttcgggcgggac
agggaacaggagcgttttgggggccgtcggcctccttatggcagtggcggcagtggtagc
gaagggcgcagtggagagagaccagaaggacgagagcgctttgccaaccgacatgaagag
tttgagcagcgaggtgggtgggagcgagaccgcagggactgggggcgcagcccagagcat
gaacgagggagggaagtggaggaccggggtcggcgtgccagcgggcacagggaccgggag
cctggaacacgggagaggagcactcgttgggacagggatgaccgccgcgaaaaagtggac
gaggtggatggtgccgaccgttaccgtgactccaatagcactgatgcccctgcaaactct
gacaaagaactgacccagccagagtctgaagggctgccaggtccagagcctttagccccg
tccacagaagtgactgcggatctggtggcctcagtggccccagtatcaactgaacctgca
gaaaaaccccaggaagcagagtcctag
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