Scleropages formosus (Asian bonytongue): 108936399
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Entry
108936399 CDS
T04919
Symbol
taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108936399 (taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108936399 (taf4)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108936399 (taf4)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108936399 (taf4)
Coactivators
SAGA/TFTC/STAGA complex
108936399 (taf4)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108936399 (taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
108936399
NCBI-ProteinID:
XP_029104426
LinkDB
All DBs
Position
24:9599297..9609270
Genome browser
AA seq
980 aa
AA seq
DB search
MAAGSDLLDEVFFNTEVDEKVVSDLVGSLECELAGPGHANAGARPQALANHVGGPTAGAN
VRESRAGLAAQEAAAAGKAGTRAQPQGGVINSTRSPASAAVDSGAPGVPASSALAAAPDT
PASSASSASAPGQGGKPGVSVRVKTLNGGGVPNSHGSGSAAEQRAAEQRADSAGPAATPV
NNGPGAGATPQGSVIQASFVSVQSAAAPAPAAASAPGSSVGPTVALARPPVHLVAAAAPG
TTTPNGSGAVVASCVTGATPQMVQTAALSSGQSPKGAPPAVPQPAAPAGVSKSPVLQSSP
RTATPTPVAAVAAAAPAAGIRPIAPQVLAPRLPQATQNPPNIQNIQLPPGMVLVRSDSGQ
LLMIHQQTLAQMQAQSQSQSAMTPRPATPTSTPQVQIAPVQGPGTSILTRQMTPTTIIKQ
TSPGQASVPATTTLQRPPVLQNPIVIGGAATATSIGTPAAAQPGAAQRAVAATPGATVTT
TTETMENVKKCKNFLSTLIKLASSGKQSSETAANVKDLVKSLLEGKIEAEDFTSRLYREL
NSSPQPYLVPFLKRSLPALRAMTPDSAAFIQQSQAQQPSGTASGTTLTTVVLGSSVQRPP
APSTASASVVSAAGTFQQPVISLPQTGHAKPGQTAPLVLHQSQQQGAVVRPPQVTLTQTP
MVTLRPPHSRIVLGQPQVQVKPLQTVPLVKQSALAGAKVPAPPVATLSAAQKNKPKDAGG
GTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTRSCKDEAFLYTATLHRRLLEI
GKKYGIVELGPEVVNLVSHATQQRLQDLLEKVSQVAQQKNISFKDDSRHEQISDVRAQLK
FFEQLDHMEKQKKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDAN
LTALAAIGPRKKRKLDWPGGGAGAEGSGSSPSLSGGSGAAASRQFTRQRITRVNLRDLLF
CLENEKGTSHSHLLYRAFLK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggctccgatctgctggacgaggttttcttcaacacagaggtggacgagaaa
gtagtgagtgacctcgtggggtctctggagtgcgaactcgcggggccaggacacgcaaac
gccggcgcgcggcctcaggccctggccaaccatgtcggcggccccacagcgggcgcgaat
gtccgtgagagcagagcgggtctcgcggcgcaggaggcagcggcggcggggaaagcaggg
actcgcgcgcagccgcagggaggtgtcatcaacagcaccaggtctccagcctcagccgcc
gtcgactccggagccccgggggtccctgcttcttctgcactcgcagccgcccccgacacc
ccggcttcttcggcttcttcggcttcggcgcccggacagggaggaaagcccggcgtgtca
gtccgggtgaagacgctgaacggcggaggggtgccgaactcgcacggctcggggagcgcc
gcggagcagcgcgcggcggagcagcgcgcggacagcgcgggacccgccgccacacctgtc
aacaacggcccgggagcgggcgcgaccccccagggctccgtcatccaggcctccttcgtg
agcgtgcagagcgccgccgcccctgcccccgccgcggcctcggcgccgggttcgagcgtc
ggacccactgtggcgctcgcgaggccgcccgtgcatttggtggcggcggcggctccgggc
acgacgacacccaacggcagcggcgcggtcgtcgcgtcctgcgtcacgggtgcgaccccg
cagatggtgcagacggcggcgctgagcagcggacagtcgcccaagggcgcccccccggcg
gtcccccagcccgcggccccggcaggggtctccaaaagcccggtgctgcagagttccccg
aggactgcgacccccacgcccgtagcggcggtggctgcggcggcccccgctgcggggatc
cgacccatcgctccccaggtgctggccccgaggctcccccaggcgacccagaacccgccc
aacatccagaacatccagctgcccccaggcatggttctggtgcgcagcgacagtgggcag
ttgctgatgatccaccagcagacgctggcccagatgcaggcgcagtcgcagtcgcagagc
gctatgaccccccggccggccacgcccaccagcaccccccaggtccagatcgccccagtc
caaggtccgggcacctccatccttactaggcagatgacccccacgaccatcatcaagcag
acgtcgcccggccaggcctccgtgccggccactaccacgctgcagagaccacctgtcttg
cagaaccccattgtgattggcggcgcagccacagccacctccatcggcaccccggcggcg
gcgcagccgggcgcagcccagagggcggtcgcagcgacgcctggggctaccgtcaccacg
acaacggagaccatggagaatgtgaagaagtgcaagaacttcctgtccacgctcatcaag
ctggcctccagtgggaagcagtcctcggaaactgcggccaacgtgaaggacttggtgaag
agcctcttggaaggaaagatcgaagcggaagatttcacgagcagattataccgggagctc
aactcgtcacctcagccataccttgtgcctttcttgaagaggagcctccccgccctccgg
gcgatgactcccgactcggcggccttcatccagcagagccaagcgcagcagccgagcggc
acggcgagcggcaccaccctcaccaccgtcgtgctgggcagctctgtgcaaaggcccccc
gccccctcgacggcctccgccagcgtcgtcagcgctgccggcaccttccagcagcccgtc
atcagcctgccccaaacgggacacgccaagccgggccagaccgcgccactggtgctgcac
caatcccagcagcaaggggccgtggtacgaccgccccaggtgacgctgacccagacccct
atggtgaccctccggccgccgcacagtcgcatcgtgctgggtcagccgcaggtgcaggtg
aagccgcttcaaacagtgcccttagtgaagcaaagtgccctagcgggggcgaaggtgccg
gcgcccccagtggccacgctgtctgccgcccagaagaacaagccaaaggatgcggggggc
ggcacctttcgggatgacgacgacatcaacgacgtggcgtccatggccggcgtgaacctg
tcggaggagagcgcccgcatcctggccaccaactcggagctggtcggcgctgtgacgcgc
tcctgcaaggatgaggccttcctgtatacagcgacgctgcaccgcaggctcctcgaaata
ggtaagaagtatggcatcgtggagctgggacctgaggtggtgaacttggtgtcccacgct
acacaacagaggctgcaggacctgctggagaaggtgtcccaggttgcccagcagaagaac
atctccttcaaggacgacagccggcacgagcagatcagcgatgttcgtgcacaactcaag
ttcttcgagcagctggaccacatggagaagcagaagaaggaggagcaggagagggagatt
ctcctgaaggcggcaaagtctcgatcgcggcaggaagacccagagcagctgcggctgaag
cagaaggccaaggagatgcaacaacaggaactggctcagatgaggcagcgggatgcgaac
ctgacagcgctggctgccatcggacccaggaagaagcggaagctggactggcctgggggt
ggggctggagcggagggctcgggttctagcccctctctgtcgggcggctctggtgcggca
gcctccagacagttcacccgtcagcgtatcacccgtgtcaacctcagggacctgctcttc
tgcctggagaacgagaagggcaccagccactcgcacctgctctatcgcgcctttctcaag
tag
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integrated database retrieval system
