Scleropages formosus (Asian bonytongue): 108936463
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Entry
108936463 CDS
T04919
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108936463 (taf1c)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
108936463 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
108936463
NCBI-ProteinID:
XP_018611345
UniProt:
A0A8C9SAU6
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All DBs
Position
6:complement(27111807..27125123)
Genome browser
AA seq
1031 aa
AA seq
DB search
MLNERRSLGEACEPVRQRWKRGAVVVPCRHVRTCCGTETESRRLLLLIIIMMDSSKFPQQ
LFPSFYYIGPPERTSGCAVEGWGTYGQLLPLGAEEEEEEEEEEGPAHLNDWKFQAQHTAK
GQKWVPMEPITIPLLAPNKVGKCTDFGRPSDAMDFPKHMKNFYLDNPQDAFGTMSSLLEE
HFYFGSGTLKAHARKTAVSMKKMKHFLRHSKYEKCSLTYFGKRARLYSHLLGDAIHDIPP
GLLAELLHEELAQRWQQQHFNEVTTGGAIGYFQLRASDTFQEGCLIYPRKSALNSLEFQQ
VVLKVKNSNSPQLSLQNKPITYKLNGTVRQISVGRMEESVHVGVRSDYCCGVWMATHALR
PVPREVIKTEDRSSCLAVSPHIPGELLVATESGAAYLWTVGRCLSKFREEEGNLYFNAQS
QWRWCDFSAHPRVVLYADRTGLELTDIRSKEKYSHTLFRIGQTPDCKSGERVMMSKYLFD
VNTYHHLVTTQYSAYIMDERFPCLPMVKWDHMMAGPPVFAQVVGRPSQGGSNKMLLGSQH
SQEVMLLQYSGGDVLACHSVGSPQQLISPMKSLKHLPVQIPHRKVKVQERLEVPLAGVAS
IYHAEKRECLCVLQLSEGGDIFYQILKPAGNESQPSKNSMGGKQPTAELSDSLLYQSQKQ
MSDSTVNEEQRTRALQVELSDNQSAATTSEMEIHGVSETSVSQTLVAQSTQVGTSLAKHS
TAQEKASKEVLMQWKSWLNILHSNQKQKRRKYEKCHWTLTTKSLISLDDGQKDSLEKGRL
SSLRNDMKELMKRKKVLIHGVTSLPPQGVLPTPDPVDTESWDNDLSQRLSMSWDGQWKSW
WEEKLGLNREKKVKELRRKRRRQKQARVRSRVCLSESFTSSVGYPSDFDFSATSSFGDSQ
PPDLGTDFGYLSSQEDLFSESECVRRVDVDKESQSSKPNLVQLDSGKARLVGNKTKTQEA
RCLNQESYLSSLFSSQEEPKEATVESSFSFPLSLSSQMSSISVSQRKPCVGASSLTSTPS
RPMKKRSRMGF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgaacgtagatcgctaggtgaagcgtgtgagcccgtcagacagaggtggaag
cgtggcgccgtcgtcgtcccgtgcagacatgtccgcacatgttgcggcactgagactgag
tcgcgccggttgctcctgctcatcatcatcatgatggacagtagtaaattcccgcagcag
ctcttccccagcttttattacattggcccccctgaacggacaagcggctgtgcggtggaa
ggctggggtacgtacggccagttactcccactgggagccgaggaggaggaggaggaggag
gaagaggagggtcctgcccatttgaacgactggaaatttcaagcacagcacacagcgaaa
ggtcagaaatgggtacccatggagcccatcacaataccactcttggccccaaacaaagtt
ggcaagtgtacagattttggccgtccttctgatgcaatggacttcccaaaacatatgaag
aacttttacctggataaccctcaggatgcctttggtacaatgagcagtttacttgaggag
cacttctattttgggagtgggaccttaaaagcacatgcaagaaagactgctgttagtatg
aagaagatgaagcattttttaagacattcaaaatatgaaaagtgctctctgacgtacttt
gggaaaagagccagactgtacagccatctgctcggggatgcgatccacgacattcctcct
ggactcctggctgagctccttcatgaagagttggctcagcgctggcaacagcagcacttc
aatgaagtgaccacagggggcgctataggctattttcagctcagggcgtcagatacattt
caagaaggctgcctcatatatcccagaaagtctgccctcaactcacttgagttccagcaa
gtggttttaaaggtaaaaaacagcaattctccgcaactcagcttgcagaacaaacccatt
acttacaagctcaatggcaccgttcgccagatcagcgttggccgcatggaggagagtgtg
cacgtgggggtgcgttctgactactgctgtggagtttggatggccacgcacgctctgaga
cccgtgccacgtgaagtcattaaaactgaggataggtccagctgcctcgctgtcagcccc
catattcctggagaactgcttgtggccactgaaagtggagctgcctatctctggactgta
gggcgatgcctttctaaattccgtgaagaagaaggaaacctgtattttaatgctcagtcc
cagtggcgatggtgtgacttttctgcacaccccagagtggtgctgtatgctgaccggaca
gggctggagctgacagacatcagatctaaagaaaaatacagccacactctgtttcgcata
ggacagacaccggactgcaagagtggggagagggtgatgatgtccaagtacctgtttgac
gttaacacataccaccaccttgttaccacacagtattccgcatatatcatggatgagcgc
tttccatgcttgcctatggtcaagtgggaccacatgatggcaggcccacctgtatttgca
caagtcgttggaaggccttcacaaggtgggagcaataaaatgctgcttggctcccagcat
tcccaggaggtaatgcttctgcagtactccggtggtgatgtccttgcctgccattctgtg
ggatctcctcagcaactcatctcacccatgaagagcctgaagcatctgccagtccagatt
ccccacaggaaggtgaaagtccaggagaggctggaggtgcctcttgctggtgttgcatcc
atctaccatgctgagaaacgtgagtgcctttgtgtgctacagctctctgaaggaggggac
atcttctaccagattctgaaaccagctggaaatgaatcgcaaccctcaaagaactctatg
gggggtaagcaacctactgcagaactatccgattcattgttgtaccaaagccagaagcag
atgagcgacagtactgtgaatgaggagcaaagaacacgtgcgttacaggtagaactgagt
gataaccaaagtgcagcaacaacttctgagatggaaatccatggtgtttctgaaacctct
gtgagtcaaactcttgtggcccagtctacacaagtaggcacaagtcttgcaaaacacagt
acagcccaagaaaaggccagcaaagaggtcctaatgcagtggaaatcatggctgaatatt
cttcacagcaaccaaaaacaaaagcgcagaaaatatgaaaagtgtcactggactttaaca
accaaatcacttatttcccttgacgatggccaaaaagactctcttgagaaaggtcgactt
agcagtctaagaaatgatatgaaagagctcatgaaaagaaagaaggtgctcattcacggt
gtcaccagccttcctccacaaggggtgctcccaactccagaccctgtggacactgaatct
tgggacaatgacctgagccagcggctctccatgtcttgggatggccagtggaaaagctgg
tgggaagagaagctgggactgaaccgtgagaagaaggtcaaggaacttcgccgaaaacgt
aggcgacaaaaacaagctcgagttcggtctcgtgtttgcctttctgaaagcttcacctcc
tctgtaggctatccatctgactttgacttctcagctacaagtagttttggagacagccag
cctcctgatttgggtacagactttggatatctgtcttctcaggaggaccttttctcagag
tctgagtgtgtgaggagagtggatgtagacaaggagtctcagagttctaaacccaacttg
gtgcagctggattctggcaaagcaagacttgtgggcaacaaaactaaaactcaagaggca
agatgcctcaatcaggaatcctacctcagttctctgttcagttcccaggaagaacctaag
gaagccactgtggagagtagcttctccttcccgctgtcattgtcttctcaaatgtccagc
atttcggtgtcccagaggaaaccctgtgttggagcttcttcgttgacctccaccccttcc
cgtcccatgaagaagaggtcacgcatgggtttttaa
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