Scleropages formosus (Asian bonytongue): 108936550
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Entry
108936550 CDS
T04919
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108936550 (rbm39)
Spliceosome [BR:
sfm03041
]
Common components
Common spliceosomal components
General mRNP proteins
108936550 (rbm39)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
RRM_5
DUF8400
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
108936550
NCBI-ProteinID:
XP_018611494
UniProt:
A0A8C9R301
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All DBs
Position
24:9306921..9317762
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AA seq
540 aa
AA seq
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MADDFDIEAMLEAPYKKDDIKSSSANGHEERSKKKKKSRSRSRSRDKRRSKSRERKRSRD
RKRSRSRERRRSRSKERRRSRSRSRERGGRYRARRSPFSGPKFNGGSRGKIGPPPTVKLS
RRRSRSRSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRD
VRIISDRNSRRSKGIAYIEFVEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANN
LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSIPFGAMAAVSDLQARLTQPAEAGISPALNLNLNNLNV
NTALNLPTQPLATQCFQLSNMFNPQSEEEPGWDVEIQDDVIEECNKHGGVVHIYVDKNSP
QGNVYVKCPSIPVAMAAVSALHGRWFAGNMITAAYVPLPTYHNLFPDSVVATQLLVPSRR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgattttgatattgaagctatgctggaagcaccttataaaaaggatgacatc
aagtccagtagtgccaatggacatgaagagcgtagtaagaagaaaaagaagagtcgaagt
cgcagccgaagccgcgacaaacggagaagcaagagtcgtgaacgcaaaagaagtagagac
cgcaagcgaagccgcagccgcgaaagaaggcgtagccgcagcaaagagcggcggcgcagt
cgctcccgcagccgggagcgcggcggtcgataccgagctcgcaggagtcccttttctggg
ccgaaatttaacggtggttccagagggaagattggcccaccacctaccgtcaaactaagc
aggagacgttccagaagccgaagccctttcaggaaagacaagagcccagtgcgggaaccg
attgacaatttgactccagaagagagagatgcacgcacagtcttctgcatgcagctggct
gctcgaatccggcctcgcgatctggaagagttcttctcagccgtgggaaaagtaagagac
gtcagaataatttctgaccggaactcaagaagatcgaaggggatagcttacatcgagttt
gtggaagccaactccgtaccactggcaattggcctgactggccagaggcttctgggggtg
cccattattgtccaggcctcacaggcggagaagaaccgggcagctgcagcagccaacaac
ttgcagaaggggagtgctgggcctatgagactctatgtgggctctctgcacttcaacatc
acagaggacatgctgcgaggcatctttgagcctttcggacggattgaaagtatccagctg
atgatggacagtgaaactggaagatccaaaggatatggctttatcacttttgctgatgct
gaatgtgctaagaaagccctagagcagctgaacggctttgagttagctggtcggcccatg
aaggtgggccacgtgacagagcgcacggatgcttcaactgccagctccttcctcgacagc
gacgagctggagaggactgggattgacttgggaaccacgggccgactacagctgatggcc
aggcttgctgaaggtactggcctgcagattcctccagcagctcagcaggccctacagatg
agtggatcgattcctttcggtgccatggcagccgtctcggatttacaagcaaggttgact
caaccagctgaagctggcatcagtcctgcattgaacttgaaccttaacaacctgaatgtg
aacactgctttaaacctgccaacacagccactggcaacacaatgcttccagctctccaac
atgttcaacccacagtctgaagaggagcctggctgggatgtggaaatccaagacgatgtc
attgaagaatgcaacaaacatggaggtgttgtacatatatatgtggacaagaattcacca
cagggcaatgtgtatgtgaagtgtccctctatacctgttgctatggctgcagtgagcgcg
ctacatggtcggtggtttgcaggaaatatgatcacagcagcttatgttcctctcccaact
taccacaacctcttcccagactctgtggtggctactcagctcctggtgccctctcgccgg
tga
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