Scleropages formosus (Asian bonytongue): 108936904
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Entry
108936904 CDS
T04919
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03250
Viral life cycle - HIV-1
sfm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108936904 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108936904 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108936904 (samhd1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108936904 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
108936904
NCBI-ProteinID:
XP_018612066
UniProt:
A0A8C9SAZ8
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Position
2:28257573..28268253
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AA seq
626 aa
AA seq
DB search
MDGRKRPRDGASSSDSFYTPKKQLADCRPPIPDFREWDVEGTCRFLREEGFAGDLEGKFR
AEKITGVCLPYLTEPQLENMGIGPLGVRLQLLSSLKKLWQIFADAIKVFNDPIHGHIEMH
PLLVRIIDTPQFQRLRYIKQLGGTYFVFPGACHNRFEHSIGVGHLAGRLVQALNERQPEL
LISPRDMLCVQIAGLCHDLGHGPFSHMFDGMFIPKMRPDYKWKHEMASVQMFDHMVKVNS
LEPVMKEHGLVLPTDLLFIKEQIAGPLDPPHPGTANQMEGWPYQGRSEEKGFLYEIVANK
RNGIDVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCEVDNKKHICTRDKEVGNLYDMFH
TRNCLHRRAYQHKVGNIIETMITEALEKADKHIKILGSGGKIFSISTAIDDMEAYTKLTD
HVFEQILYSSSKELAEARAILNNVVVRKLYKCVGQTQPKRPLDITMNNLLQWAKDVSVAK
PRSGTDVTFQGEDFVISVIDMDYGMKEKNPINNVRFYCKNDPSKAIKIRKNQVSQLLPEK
FAEQLIRVYCKRTDAKSLEAAKKYFVQWCINKDFIKPQDGDVIAPELTPLKDSWVADDNS
DDDGNSQDKHHHPSRNGIHSVKVRLF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatggcagaaagcgtccccgggatggagcttcgagctccgactccttctataccccg
aagaagcagctggctgactgccgcccgcccatccccgacttcagggagtgggatgttgag
ggaacgtgccggtttctgcgggaagaggggttcgccggagacctcgaagggaagttccga
gcggagaagatcactggggtgtgcttaccgtacctcacggagccgcagctagagaacatg
ggtatcggcccactaggggtgcggttgcagcttctctcctccttgaagaagctctggcag
atatttgctgatgccattaaggtgttcaatgaccccatccatggccacatcgagatgcac
cctctgcttgtgcgcatcatcgacaccccacagttccagaggctgcgctacattaaacag
ctgggtggcacctactttgtttttcctggagcctgtcacaaccgctttgagcactccatc
ggggtgggtcaccttgctggccgcttggtccaggccctgaacgaacgtcagccggagctg
ctcatcagccccagggacatgctgtgcgtgcagattgccggcctgtgccacgacctcgga
catggccccttctctcatatgttcgatggaatgtttatcccaaaaatgcgtcctgattac
aagtggaagcacgagatggcgtctgtgcagatgttcgaccacatggtcaaggtgaacagt
ctggagcctgtcatgaaggagcatggtctggtacttccgacggacctattgttcatcaag
gagcagattgctggacccctggaccccccccacccagggacagccaatcagatggaagga
tggccgtatcaaggtcgctcagaagaaaagggcttcctctacgaaattgtggcaaacaaa
aggaatggcatcgatgtggacaagtgggattactttgccagggactgttatcatcttggg
atccagaacaattttgactacaggcgcttcctcaaatttgcacgtgtttgtgaggtggac
aacaagaagcacatctgcaccagagacaaggaggtggggaacttgtatgacatgtttcac
accagaaactgcctccatcgcagggcgtaccaacacaaagtggggaatatcattgaaacc
atgataacagaggctcttgagaaggctgataagcacatcaagattttaggctctgggggc
aagatcttctccatctccactgctatagatgacatggaggcctacaccaagctcacagac
catgtgtttgagcagatcctgtactcctcaagcaaggagcttgctgaggcacgggccatc
ctcaacaacgtcgtcgttcgaaagctctacaaatgtgtgggccagacgcagcccaagcgg
cccctggacatcacaatgaacaacttgcttcagtgggccaaggatgtttccgttgccaag
cctcgtagcggcacagacgtgacctttcagggggaagacttcgtcataagtgttatcgac
atggactatggcatgaaggagaagaacccgattaataacgtgcgcttctactgcaagaat
gaccccagcaaagctatcaagatccggaagaaccaggtctcccagctcctgcctgagaag
tttgcggagcagctgatccgtgtgtactgcaagcggacggacgccaagagcttggaagcg
gcaaagaagtactttgtacagtggtgcatcaacaaagacttcattaagccgcaggatggg
gatgtgatcgcacctgagctcaccccgctgaaggacagctgggttgctgacgacaacagc
gatgatgacggcaactcccaggataaacaccaccacccttccaggaacggcatccatagt
gtaaaagtccgacttttctaa
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