Scleropages formosus (Asian bonytongue): 108937002
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Entry
108937002 CDS
T04919
Symbol
top1
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfm03032
]
108937002 (top1)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108937002 (top1)
DNA replication proteins [BR:
sfm03032
]
Eukaryotic type
DNA Topoisomerases
108937002 (top1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
108937002
NCBI-ProteinID:
XP_018612245
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Position
2:28342996..28369620
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AA seq
758 aa
AA seq
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MSGDHGHKDSKVIDSGSRVNESHKHKDKHKDKEHRHKDHKKDREREKSKYSNSEHKEFSE
KKHRDKDKVKHKDGSLERHKEKHKEKRKEEKIKSFSFDEKPKKEKENGFASPPRIKTETD
GDSFYYSPKYEKSLKREHDDDDIEFKPKKIKVENEKKAKKRKQEEEDIEPKKKTKDKKTD
ETDGKKKAKKEPEEKWKWWEEERYTDGSKWKFLEHKGPVFAPPYEPLPSNVKFYYDGKHM
KLSPQAEEVATFFAKMLDHEYTTKEVFRNNFFKDWKKEMTPEEKSKITNLSKCDFTEMSE
YFKAQTEARKQMSKEEKQKIKEENERIVQEYGFCVMDNHKERIANFRIEPPGLFRGRGDH
PKMGMLKRRIRPEDVIINCSKDSKHPKPPPGTKWKEVRHDNKVTWLVSWTENIQGSIKYI
MLNPSSRIKGEKDWQKYETARRLKKCVDQIRAQYRDDWKSKEMRIRQRAVALYFIDKLAL
RAGNEKEEGETADTVGCCSLRVEHIKLYPELNGQEFVVEFDFLGKDSIRYYNTIPVEKRV
FKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKELTC
PEDNTPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQSKIDAKKDQLADARRELKS
AKADAKVRKDEKTKKAVETKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPR
ITVAWCKKWNVTIEKIYNKTQREKFAWAIDMADKDFEF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgatcatggacataaggactccaaggtaattgattccggatcccgggttaac
gaatctcacaaacacaaagacaagcataaggacaaagaacacaggcataaagaccacaaa
aaagaccgggaacgggagaaatccaaatacagtaacagtgaacacaaggaattctcagaa
aagaaacacagagacaaagacaaagtgaagcacaaagatggcagcttggagagacacaag
gaaaagcacaaggagaagaggaaagaggagaagatcaaatcattcagttttgatgaaaaa
ccgaagaaagagaaagaaaatggatttgccagccctccccgtataaaaactgaaacagat
ggtgatagcttctactattctcccaaatacgagaagtcactaaaacgggaacatgatgac
gacgacattgaatttaagcctaaaaaaattaaggtggagaatgagaagaaggcaaaaaag
aggaaacaagaagaggaagacatagagccaaagaagaagacaaaggacaagaaaacagat
gaaactgatggcaagaagaaggctaagaaagagccagaggaaaagtggaaatggtgggaa
gaggagcggtacactgatggctcaaaatggaagtttctagaacacaaaggtcctgtcttt
gcccctccctatgaaccacttcccagcaatgtcaagttttattatgatgggaagcacatg
aagcttagcccccaggccgaggaagtggccacattctttgccaaaatgctggaccacgag
tacactaccaaggaagtcttccgcaacaacttttttaaggactggaagaaggaaatgaca
ccagaagagaaatccaagataacaaacttaagcaaatgtgattttactgaaatgagcgaa
tacttcaaggctcagacagaggcccgaaaacaaatgtcaaaagaggagaagcagaaaata
aaagaggagaatgagcggatcgtgcaggagtacggcttctgtgtgatggacaaccacaag
gagcgaattgccaacttccgtattgagccaccaggcctgttccgtggccgaggggaccac
cccaagatgggcatgctgaagcgacgcatccggccagaggacgtcatcatcaactgcagc
aaggattccaagcaccctaaacctcctccaggcaccaagtggaaggaagtgcgacatgac
aacaaagtgacatggcttgtatcctggacagaaaacattcagggctccatcaagtacatc
atgctgaaccccagctccaggatcaagggagaaaaggactggcagaagtatgagacagct
aggaggctaaagaagtgtgtggaccagatccgagcacagtaccgtgatgattggaagtcg
aaagagatgcgaatccgacagagagccgtagcactttacttcatcgacaagctggccctg
agggcagggaatgagaaggaggagggagaaacggcagacactgtgggctgctgctcactg
cgggtggagcacattaagctctaccccgagctgaatggccaagagtttgtggtggagttt
gacttccttggaaaagactccatccgctactacaacaccattcctgtggagaagagggtt
tttaagaatttacagttattcctggaaaacaagcagcctgaggatgacctttttgaccgc
ctcaatacctctattcttaacaagcaccttcaggaactcatggacggactgacagctaaa
gtgttccgaacctacaatgcctccatcaccctgcagcagcagctgaaggagctgacctgc
cctgaagacaacacacctgcaaagatcttgtcctacaaccgggccaaccgtgctgtggcc
atcctgtgtaaccaccagcgagccccccctaagacctttgagaaatccatgcaaaacctg
cagagcaagatagatgcaaagaaagatcagctagctgatgccagaagagaactaaaaagt
gccaaggctgatgccaaagtacggaaagatgagaagaccaaaaaagctgtggagaccaag
aaaaaggctgtgcagagaatagaggagcagttaatgaagcttgaagtacaggcaaccgac
cgtgaggagaataagcaaattgctttgggcacctctaaactcaattatctggacccccgg
attacagtagcctggtgcaagaagtggaatgtgaccattgagaaaatctacaataaaacc
cagcgagagaagtttgcctgggccattgacatggcagacaaagactttgagttttaa
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