Scleropages formosus (Asian bonytongue): 108937058
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Entry
108937058 CDS
T04919
Name
(RefSeq) sonic hedgehog protein A-like
KO
K11988
sonic hedgehog
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108937058
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108937058
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfm00536
]
108937058
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C46: hedgehog family
108937058
Glycosaminoglycan binding proteins [BR:
sfm00536
]
Heparan sulfate / Heparin
Morphogens
108937058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF7764
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
108937058
NCBI-ProteinID:
XP_029110377
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All DBs
Position
9:complement(28547739..28556635)
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AA seq
428 aa
AA seq
DB search
MLLLLPPLPLTRVALVGFVCAALLSHAWACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEK
TLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVM
NQWPGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVY
YESKAHIHCSVKAENSVAAKSGGCFPGSASVTLEGGGRKRVHELRAGDRVLAADARGKLL
YSDFVMFADRDETTRRLFHVIETREPRRQLVLTAAHLLFVLDNATDAVHAMRATFASRVR
PGQHVLVVADEARGRLEAAAVERVYVEERRGSFAPVTAHGTVVVDRVLASCYAVVEDHRL
AHWAFAPVRLVHALTSLFRAEEPRWEQRNSTSSQGGGVHWYPQVLYHVGRWVLGGNSLHP
LGMPVTSS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctgccgccgctgccgctgacgcgcgtcgcgctggtgggcttcgtgtgc
gcggcgctgctgtcccacgcgtgggcctgcggaccgggcaggggctacggcaggaggaga
caccccaagaagctgacacctctcgcgtacaagcagttcatccccaacgtggccgagaag
acgctgggcgccagcgggcgctacgagggcaagatcacgaggaactcggagaggttcaag
gagctgacccccaattacaaccctgacatcatcttcaaggatgaggagaacaccggcgcc
gacaggctcatgacacagagatgcaaggacaagttgaactctctggccatatcggtcatg
aaccagtggcccggggtgaagctgcgggtcacggagggctgggatgaggacggtcatcac
ttcgaggagtccctgcactacgagggcagggcggtggacatcaccacctcggaccgggac
aagagcaagtacggcacgctctcgcgactcgccgtggaggccgggttcgactgggtctac
tacgagtccaaggcgcacatccactgctccgtgaaagcagagaactcggtcgccgccaaa
tcagggggctgcttccccggctccgcctccgtcaccctggagggcggcggcaggaagcgc
gtgcacgagctgcgcgcgggcgacagggtgctggcggccgacgcccgcgggaagctcctc
tacagcgacttcgtgatgttcgcggaccgcgacgagaccacccgcaggctcttccacgtc
atagagacccgcgagccgcgccggcagctcgtgctcaccgccgcgcacctgctcttcgtc
ctggacaacgccacggacgccgtgcacgccatgcgcgccaccttcgccagccgcgtgcgg
cccgggcagcacgtgctggtggtggcggacgaggcgcgcggacggctcgaggcggcggcc
gtggagcgcgtgtacgtggaggagcgccggggctcgttcgcgcccgtcaccgcgcacggg
accgtggtggtggaccgcgtgctggcctcgtgctacgcggtcgtggaagaccaccggctc
gcgcactgggccttcgcgcccgtgcggctcgtgcacgcactgacctccttgttccgagcg
gaagagcctcgatgggaacagcggaacagcacgtcgtcgcaggggggcggggtgcactgg
tacccccaggtgctgtaccacgtggggcggtgggtcctgggcgggaactcgctgcacccc
ctcggcatgccggtgacctcgagctga
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