Scleropages formosus (Asian bonytongue): 108937226
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Entry
108937226 CDS
T04919
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfm01001
]
108937226 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfm04054
]
108937226 (ciita)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108937226 (ciita)
Protein kinases [BR:
sfm01001
]
Serine/threonine kinases: Other
TAF1 family
108937226 (ciita)
Pattern recognition receptors [BR:
sfm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108937226 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
WHD_NOD2
TsaE
Motif
Other DBs
NCBI-GeneID:
108937226
NCBI-ProteinID:
XP_029109972
LinkDB
All DBs
Position
8:complement(19345181..19360375)
Genome browser
AA seq
1324 aa
AA seq
DB search
MIPFEDVLTQVRKTLEGTTPGKVQAILAELVEAQVLSWDFYQSLIQERDTDDVARRISLV
AWQNWDLCQAAIGSTMGKEQDLEGLCAVESALDNPALDSSRLCSVDSVLDNGKLCSFDSV
LDSRDSALNSGGLSFVDPTLDSEGLCSGDPALDSEELCSIDSVLDSGHVCSGNSALDSGR
LCSGAAVLESRGPYHSAFRRPGMQEFTMDFPMDIPLDNVLDQDIYFDDLNLGTVFSPNPY
DSLDDWTLNQSIDNLIRSLSDELDNFIQSNELTLSEPALAEPILPETMSSTPPTIEMPSL
TARPVKRAADLESTNLTCEAKDKKQKKKGPGSRPWKTRRKSMQHNRSKSGRSQEDIPCGF
PNQAVSQGILQINPNMIPQLVPVSIPNVPTLGSTAFFNPCANGPTIQLIPAVTYPQQLIN
ISVPSSLAPGTPTYVFVPPPPVTPTAHPMPQSPGTGAVVPSDFVVSTPVSSSSDTAFQAS
SPEAGSTPSPTSESPIQAPQLEPPPELPKYVEDYVQLAKSTIKETYQATNTETEKNTSME
SLYINVPLVQRHIQIKTGTGTNKCLEKELVVLSDNDRKKGMLFRSQLFEDTGRKPNQIIA
LMGKAGMGKTMFVHRLCLDWSIGDLPRFDYVFLLKCKALNLPQGNYSLKTLLFDLSTSPP
CKDMDAVFRYILSFPQRVLIIFDGFDDFKDHEGLLHSPATSNNKENFSIKQLISGLLQRK
LLLGCTVLITARPKEVFNQFMGKVDRIMELCGFSQQEVEMFVSKYFRDASTRDKALMDLT
SQPFILSLCSNPLICRYTCFLLEKPEGKQLPSTFTGLFQRVINQKLYLDSQRQDPLKSQQ
KVQMAKLCRIAWEGVKTHCSFLTQKDAALLKEFGLSTGMLSSYLVKEKKGSAELAYGFAD
PITQTFLGAMHLVQSTVVSDKALVAQTTAPQKRRRPQAEGLDATRRFALGLLFQKTAQDE
KGGAAATAKRGAAAAHLRGMKPREMGPGRLLELLHCAYETANAAVIQDLVKRLPDDLTFS
GVQLTPSDVFVLQHMLLKAKNAKRTFSINLEETGIDIQGLKELLGMKCILSFRASIADII
SLWEGLQRSKEDKLLKITVAKFTICPFKATQLCHVDHLVTLVQIYKGRKLPNCDISPMEE
LPDGDTFDLPAVKNLRKLELGLGSSKGLSGLFRLLEVLPALHWLQHLDLDDNKIGDDGAG
KLAEVLPALSSLEMLNLSQNCIGDKGMEKLAPALPSLTSLRSLSLYSNLIGDSGAENLAK
VLPHIASLTDLDVKDNRFTDFGAQKLSDGLRNSPKMKTVRMWNHYIPHGVLEHLKQQDSR
IKSL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgatcccctttgaggatgtcctcacccaagtgcggaagaccctggaggggacgacacct
gggaaagttcaggccatcctggcagagctggtggaggctcaggttctctcatgggacttc
tatcagtctctcatccaggagagggacactgacgatgttgccaggaggatatcgctcgtg
gcatggcagaactgggacttgtgccaagctgccattggctcaacaatgggcaaggagcaa
gatttagaaggactgtgtgctgtggaatcagctctggacaacccagcactggacagcagc
cgtctgtgttcagtagactcagttctggacaatggaaaactctgttctttcgactcagtg
ctggacagtagagattcagcactgaacagtggaggtctgtctttcgttgacccaacactg
gatagcgaaggtctgtgttctggagatccagcactggacagtgaagaactatgttctata
gactcagtactggacagtggacacgtatgttctggaaattcagcactggacagtggaaga
ctatgttctggagctgcagtgctggagagcagaggtccttaccactctgcatttcgcaga
ccagggatgcaagaatttacaatggattttcctatggacattcccctggataatgtttta
gatcaagacatctactttgatgatttgaacttgggcactgttttctccccaaacccgtat
gattcactagatgactggacattaaatcaaagcattgacaacctcatccggtctctaagt
gatgaattggacaactttatccaaagcaatgaattgacactgtctgagcctgcactggca
gagcccattttgccagagaccatgagctcaaccccacctaccatagaaatgccatcgctg
actgccaggcctgtgaagagagctgcagatctggaatccactaacttgacctgtgaagca
aaagacaaaaaacaaaagaagaaagggcctggaagcagaccatggaaaacaagaaggaag
agcatgcagcataaccgctcaaaatctggcagaagccaggaggacatcccctgtgggttt
cctaaccaggctgtctcccagggcatcctccagatcaacccaaacatgattccccagctg
gttccagtctctatccccaatgtgccgactctcgggagcaccgccttcttcaacccttgt
gccaatggtccaaccattcagctcatcccagcggttacctatccgcagcaactcatcaac
atctcggtacccagctccctggccccaggaacgcctacttacgtgtttgtgccaccaccg
cctgtgacacccacagcccaccccatgccccaatccccaggcactggggctgtggtaccc
tctgactttgtggtctccacccctgtgagttcctcctctgacactgcattccaagcatca
tctccagaagctggctccaccccatctcccacctcagaatcaccaatccaggctcctcaa
cttgaacctcctcccgaattaccaaagtacgttgaggattatgtacaattggctaaatcc
acaataaaagaaacctaccaagccacaaatacagaaacagaaaaaaacacatccatggaa
tcactctacataaatgtacccctagtgcaaagacacatccagatcaagacaggcacaggt
accaataagtgtctggaaaaggagcttgtggttctcagcgataatgacaggaagaagggc
atgcttttcagaagccagctctttgaagacacaggacggaaaccaaaccagatcattgcc
ttgatggggaaagccgggatgggcaaaactatgtttgtacacaggctctgcctggactgg
tccatcggcgacctcccacgctttgactacgttttcttactgaagtgcaaggcattgaat
cttcctcagggaaactatagtcttaagaccttgctatttgacttgtccacttctcctccg
tgtaaagatatggatgccgttttcaggtacattctttcctttccccagcgggtcctcatc
atatttgatggttttgatgacttcaaggaccatgaaggtctcctccattctcccgccacc
agcaacaataaggagaacttcagcattaaacagcttatctcaggactgttgcagaggaag
ctactccttggctgcactgtcctgatcacagctagacccaaagaagtttttaaccagttt
atgggtaaagtggacagaattatggagctgtgtggtttctcgcaacaggaagtggagatg
tttgtatcaaagtactttagggatgcctcaactcgtgacaaggcactgatggacctaacg
agccaaccattcatactcagcttgtgttccaatccacttatatgtaggtacacttgcttc
ctacttgagaagcctgaaggcaagcagttaccctcaacattcactggtctcttccagagg
gtaattaaccaaaaactatatctggattcccagagacaggatcctctgaagagccaacag
aaggtacaaatggcgaagttgtgtcgtattgcctgggaaggagtgaaaacccactgctct
ttcttgacccagaaggatgctgcactgctgaaggaattcgggctgagcactgggatgctt
tcatcttaccttgtgaaagagaagaaaggatcagctgagctggcctatgggtttgctgat
cccatcactcagaccttcctgggtgcaatgcacctcgtccagtccacagttgtgagtgac
aaggccctggtggcacagacaacagcaccacagaaaagacggagaccccaggcagaaggg
ctggatgccacacgtcgctttgccttgggcctgctcttccagaagaccgcacaagatgaa
aagggtggagctgctgctacagcaaagaggggagcagcagcagcccacctgaggggcatg
aaacctcgtgagatgggccctggtcgactcctggagctgttacactgtgcctacgagact
gccaatgcagcagttattcaggacttagtcaagcgccttcctgacgatttgacgttcagt
ggagttcaactcaccccgtccgacgtctttgttcttcagcacatgctactcaaagcaaaa
aatgccaaaaggaccttctccatcaatcttgaggaaactggcatcgacatccagggatta
aaagagctacttggaatgaaatgtatcctgtcattcagggcatcaatagcagatattata
agcctatgggaaggtctgcagagaagcaaggaggacaagcttctgaaaatcacagtagca
aagttcaccatatgccctttcaaagccacacagctgtgtcatgtcgatcatttggttacc
cttgtgcagatctacaaaggaaggaaattgcccaactgtgatatcagccccatggaagag
ttgccagatggagatacctttgacctccctgctgtgaaaaacctccggaagctggaactg
ggtctgggctcatctaaaggcctcagtggtctctttcggctcctcgaagtcttgcccgcg
ttgcactggctccagcacctggacctggacgacaacaaaattggagatgacggggcagga
aagcttgcagaagttctgcctgctttgtcttcactggaaatgctcaacctgtcgcagaac
tgcataggagacaaaggtatggagaagctggccccagcgttgccatcactcacctcactg
cgcagcctcagtttgtacagtaacttgattggcgacagtggggccgagaacctggcgaaa
gtgttgccacacattgcttcactgaccgatctggatgtgaaggacaacaggtttactgac
tttggtgctcagaagttgagtgatggtttaagaaactctcccaagatgaagactgtaagg
atgtggaaccattacattccccatggggttcttgagcacctgaagcaacaggattcaaga
atcaaatccctgtag
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