Scleropages formosus (Asian bonytongue): 108937228
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Entry
108937228 CDS
T04919
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108937228
03036 Chromosome and associated proteins [BR:
sfm03036
]
108937228
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108937228
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108937228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
108937228
NCBI-ProteinID:
XP_029110102
LinkDB
All DBs
Position
8:complement(19148036..19165550)
Genome browser
AA seq
1626 aa
AA seq
DB search
MAPIRDSVSHSPNQTDLSHGSLGAQYENPSWSTGSPGSDSDIPWCDVVLHGCERESWPVI
RDGNLELTSECVDGDSASSTGSERNLHGTASGSCSGGDDSGISVQSHGPSTCFGLAGGSD
PTGSGSLRGPWGVSLSPAGSTCEGSSESDLGTQANEGHSKALPWGSTGSSANRDMNPSTS
APNTSLSTWSATQSSGPLGNSNVAWNTLQDDNTEPAANGTSGKPLNLNTETNGPNTTNVI
TSSLPNSTSSAQTSEPSTWHVSSASSCVGEGGSGAAWGEKSATPPEDHSAADTVNTSLTQ
AGLSAPASCRSSDNANRGWESGPKSSPSLSWSAGSAATQHPWGSVSSSSSTSVTSHAGGR
SSNSEWTSLPSAGLCEGDNGTGKQTSAWRSLEDDALGRGGAASHSSSSASTWPRPVEASE
GSSESSVGSRTERDTHRSIRKKGSSPSGLVQSMLSRGDIDPRVLSNTGWGQTPIRQDNAW
DLAALQTRTKPEISTGAKGTKGSSAQDSWGDALTASGSVKNGQAVGSNKGDCSWSNGQKS
KQGWVPPAGGEEWAGVGHWVEPQKPGSGSWESDSDRSGSGWSEAGHGSTGSTWDGSSEGR
APSRSDGVSVWSDATKFDNGQHKGGVENGNPKQSTQCWGEDTASCSSAEWCRMQDSSGVQ
SKASGWLGGPMPSPPRENEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNSGNVNMWNA
SSGLNTALPKAQPQHTAPAAEIAPPPCSLSSKAKSSSSSWGEPYETAQKCESSWVVPVTI
DNGTSAWGKPVDTGASWEEPASCGWAGPKPAQDTWGGEGLPAPGAHPPSWEPEEEVEIGM
WSNNTSAEMSQTGSWSGTKKAGPKYNKGTNKPDDTWMNQFSKQFNDINFTREPSEEAMRS
NRMEIAGGVLADKHMDVEKHGQSLEYNGMMRKGVGTRQQMAKDDRSPYFDKNMSPVFGGG
NTALPGRASQQLPSQPNLRSQVPPLLPSQVPASLLKYPPASGGLGPLLAPQQMAMLSQLS
QLSQLNQLNQLSQLQRLLLQQQKIQQQQRNMTVGSRQQPDLQGRSVGSNVQPLTAPSRHL
DPPQPKRQSSPLPPSALASYMETLVPQAGSEPSREQHTLGAFSSFPLGSYPIHSGLRQAE
ALLQQAVKPPTPMLTSDGHSLLNNGLACPESPIQPRTRRPLTTLDTTTASARGLSSSLNV
NNLDINFKEPQSRLKKWTALDMSVSSPLDPTPGKPGALSSGLRLEDPAFISYDFRNGSSS
PVSPPGSVGDSWSTRAKSPHGISQASWPPEFRPGEPWKGYPNIDPETDPYVTPGSVMNIL
SINTVRDVEHLRDRNNGSTSSLNTTLPSTSAWSSIRAYSSSLSSTAQSISARSGDSKSAW
SSGAGANSSLAHELWKVPLPSRSVSTPSRPPPGLTGQKQPAPWDDGPLRLGTWGGSDSRF
TPGSNWSDSNSGRAATNWLVLKNLTPQIDGSTLRTLCMQHGPLMTFHLNLPHGNAVVCYS
SKEEAAKAQTSLHMCVLGNTTILAEVAGEEEVSRFFAQGQSSVTTSPGWQALGVPPGRGS
SMDGSHPYPGHWSGAGDLQASPLWGAPNYSTSLWGNPGGGESRGMASSSPLASFLPDHLT
GGGDGM
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggcacccattcgagactcagtcagtcactctcctaaccagacagatctgagccatggc
agcttgggtgctcagtacgaaaatccttcttggagtactggttctcctgggagcgactct
gacatcccctggtgtgatgttgtgctgcatggctgcgaaagagagtcttggcctgtgatc
cgcgatggcaacttggaattgacctctgaatgcgtggacggtgactctgcctcaagcaca
gggtctgagaggaacttgcatgggacagcctcagggagctgcagtggtggagacgactct
ggcatcagtgtgcagagccacggcccctctacttgttttggcttggctggtggcagtgac
cctaccggcagcgggagcctgagaggaccttggggtgtaagcctgagtccagcaggaagc
acatgtgaagggtcttcagagagcgacctgggcacacaggctaatgaaggacacagcaag
gcgctgccgtggggctccactggctcctcagccaatcgggatatgaaccccagcacctcg
gccccaaacaccagcctcagcacttggagtgcaacacaaagcagcgggcccttaggcaat
tcgaatgtggcctggaacacccttcaggatgacaacactgagcctgcagccaacggtaca
agtggaaaacctttaaaccttaacactgagacaaacggaccaaacactactaatgtgata
acctctagtttaccaaactctaccagttcagcgcagacgagtgaaccgtccacatggcat
gtttcctcggcttctagttgtgttggtgagggaggaagtggcgcagcatggggagagaag
agtgccacccccccagaagaccacagtgcagctgacactgtgaacacctctctcacacaa
gcagggctgagtgcccctgcttcttgcaggagcagtgataacgctaatagggggtgggag
tctggacctaagtcttctccaagtttgtcctggtcagcaggcagtgctgcaacccaacat
ccctggggaagtgtctcatcgtcgtcctcaacatctgtcacgtcacatgctggcggaagg
tcctcgaacagcgagtggacatccctccccagtgctgggctgtgcgaaggtgataacggc
accgggaagcaaacgagcgcctggaggtcattggaagatgatgctttgggcagagggggg
gccgcatcccacagtagcagctcagctagcacctggcccaggcctgtggaggcaagtgaa
ggtagcagtgagagcagcgtaggcagccgcacagagagagacacgcaccgcagcattcgt
aagaaggggagcagcccatcgggactggtgcagagcatgctttcaaggggagatattgac
ccccgtgtcctgtctaacacaggctggggccagaccccaattcgacaggacaatgcttgg
gatttggctgctttacagactcgcacaaagccagagatcagtacaggagccaaaggaacc
aaaggctccagtgcacaggatagctggggggatgcgctgactgcatcaggatcagttaaa
aatggccaggctgtggggtccaataagggggattgctcttggagcaacgggcaaaaatca
aagcaaggatgggtgcctcctgctgggggtgaggaatgggctggggttggccactgggtt
gaaccccagaagccaggttccggcagctgggagagcgacagtgaccgctcggggtctggc
tggagcgaggcaggccatggcagcactggcagtacctgggacggcagcagcgaggggcgc
gcccccagcagaagtgacggtgtgtctgtgtggagcgatgccactaaatttgataatggc
cagcataaaggtggcgtggagaatgggaatcctaaacagtctacccagtgctggggggag
gacacggcctcctgcagttctgcagaatggtgtaggatgcaggattcttcaggggtccag
agcaaagcctcagggtggttggggggacccatgccatcaccacctagagagaatgagccc
acaggctgggaggagccctcgcctgagtctatccgccgcaagatggagattgatgatggc
acctctgcctggggcgaccccagcaagtacaacagtggcaatgtaaacatgtggaacgca
agcagtggtcttaatacggcgctgcccaaagcccagcctcagcacactgcaccggcagca
gagattgctccacccccctgctctttatccagcaaagcaaagtcctccagctcaagttgg
ggggaaccatacgaaacagcacagaaatgcgagtcctcgtgggttgttccggtcaccatt
gacaacggcacctcggcatggggtaagccagtagacacgggtgcgagctgggaagagcct
gcatcttgcggatgggcaggtccaaaacctgcgcaagacacctgggggggtgagggactt
cctgcccctggtgcccatcccccaagttgggagccagaggaggaggtggaaattgggatg
tggagcaataacacttcagctgagatgagtcagactggcagttggtcaggcacaaagaag
gctggtccaaagtacaacaaaggaacgaataagccagatgacacttggatgaatcagttt
tcaaaacaattcaacgacataaatttcacaagagagccttctgaggaggccatgagaagc
aacaggatggagatagcaggtggagtgctggccgacaagcatatggatgttgagaagcac
ggacagagcctggagtacaatggcatgatgaggaaaggggttgggacacggcagcagatg
gccaaagatgatcgcagcccctactttgacaagaacatgagccctgtgtttgggggtgga
aatacagctctgcctgggagggcctcccagcagcttccctctcagcccaacctgcgcagt
caagtgcctcctctgcttccctctcaggtcccagcatccttactgaagtatccccctgcc
agtggtggtcttggccctctgttggcaccccagcagatggccatgctcagccaacttagc
caactcagccaactcaaccaactcaaccaacttagccagctgcagcgcctcctactgcag
cagcagaagatccagcagcagcagagaaacatgactgtagggagtcgtcagcagccagat
ctgcagggtcggtctgtaggctctaatgttcagccattaacagcaccttcgcgacacctc
gacccccctcagcccaaaaggcagagttctccactgcctccgtcagcactagcctcctac
atggagacattggtgccccaggcagggtctgagccgtctagagagcagcacacacttgga
gcattttccagtttccccctgggcagctaccccatccacagtggcctgaggcaggctgag
gccctgctgcagcaggctgtcaaaccccctactccaatgctcacatcggatggccacagc
ctcttgaacaatggtcttgcatgccccgagtcacctatccagcctcggacacgaaggccg
ctcaccacccttgacactactacagcatctgcccgaggcctgagctccagcttgaatgtc
aataatctggatatcaactttaaggagccacagagtcggctgaagaagtggacagcattg
gatatgtccgtcagctcccctctagatccaacccctggcaaacctggtgcactctcctct
gggctcagactggaggaccctgcttttatttcgtacgacttccgcaacggcagcagttcc
cctgtcagcccacctggttcagtgggggacagctggtccacccgtgccaaatctccccat
ggtatcagtcaggccagctggccaccagaatttcggcccggtgagccctggaaaggctat
ccaaacattgaccctgaaactgacccgtacgtcactcccggcagcgtgatgaacattctc
tccatcaatactgtccgggacgttgaacacctcagggacagaaacaatgggtcaacctcc
tctcttaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctacagcagt
tctctcagcagcacagcacaaagcatttcagccagaagcggtgactccaagtctgcctgg
tcatctggagctggcgccaactcctctctggcccatgagctgtggaaggtcccgctgccc
tccaggagtgtctccactccatcccgaccaccacctggcctcacaggccagaagcagcct
gccccctgggatgacggccctctgcgtcttgggacttgggggggctccgactctaggttc
acacctggttccaattggagtgacagcaactcaggaagggcagccaccaactggcttgtt
ctgaaaaatctcacccctcagattgacggctccaccctgaggaccctgtgcatgcagcat
ggccccctcatgacattccacctgaacttgcctcacggcaatgcagtcgtctgctacagt
tcgaaggaggaagccgccaaggcacagacatctctgcacatgtgcgttttagggaacact
accattcttgctgaggttgccggtgaggaggaggtcagccgtttctttgcacaaggccag
tcgtcagtgaccacttcaccaggctggcaggccctcggcgtccccccaggccgtggtagt
tccatggacggcagtcatccctatcccggacactggagcggtgctggggatctgcaggcc
tcccccctctggggggctcccaactattccacgagcctgtgggggaaccctgggggcggg
gagagccggggcatggccagctcctccccacttgcatccttcctccctgaccacttgacg
ggaggtggggacgggatgtaa
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