Scleropages formosus (Asian bonytongue): 108937575
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Entry
108937575 CDS
T04919
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04144
Endocytosis
sfm04517
IgSF CAM signaling
sfm04520
Adherens junction
sfm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108937575
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108937575
09144 Cellular community - eukaryotes
04520 Adherens junction
108937575
04530 Tight junction
108937575
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108937575
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108937575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108937575
NCBI-ProteinID:
XP_029109205
UniProt:
A0A8C9W7B8
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All DBs
Position
7:10057051..10158658
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AA seq
1349 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGHMTVQCLIQQAVMRYKKAIAKEPGYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQDPHHGGDGTSTSSTGTQSPDPFHAASEIEVTTSILRTN
MPLQVRRSSDPALAGLSTSFRDVQVTRAEPSRQQPTRWSTTAGFLKPRSTVDSLECRGRA
SETYRSLPRDSSAWGSHRTFQRESARTSIGAAPPLEDPWLERQDKGEEVGEGENGRIEPV
GRADSGLERVSSPSLDDIVTLVEVSNDGGPLGIHVVPFSSRDRRTLGLLVKRLEIGGKAE
EQGLFRENDCIVRINNGDLRNVRFEQAQQMFRQAMRCPVILFHVVPVARKVQYERLSQSE
RSPACSPGPCGVETRLGETGGLSGRGDRAACRVSQTGPRPQRKPDPQGNAPSEPSGFRST
LPHAAAAGPAGKPPPGPPLSPQRPRSSTPTVGFARRVGRKLDIQLKKGPEGLGFSITSRD
VPLAGSAPIFVKNILPRGAAIQDGRLKAGDRLLEVNSVDLSGRTQEQVVGLLRATPMGGT
VDLVVLRQEQEDTFPSREANTAPWMQSPRDPKRLAREGVCPEEPCSQIEKTEEEELVLTP
DGTREFLTLEIPLNDSGSAGLGVSVKGNRSKENHADLGIFVKSIIHGGAACKDGRLHIND
QLIAVNGESLLGKTNQDAMETLRMSMSAQGNKRGAIQLIVARRVAKLNGSDLPLDGSADD
HERRISHSLYEGLDVAPIPVSPSTGRIMGNYQLSPTVNMPQDDTVIIEDDGPTAVPTHLS
DQSSCSSHDDVGVAMQSPARWAPEMQSDCLEQDQDIDPADAFQREGFGRQSVSEKRTKQC
GDPSQPEAVKTRKSKSMDLAAAEDNTASRSEYAEGSSTQDVGPSLGLKKSSSLESLQTAV
AEAMLNGDVPLHRPRPRIIRGRGCNDSFRAAIDKSYDRMPPEQDDEDVETLEEDTEGSSR
SGRDSVSTVEACERQFNGGRLKDDRKKEKGGKEKKKQEKEKGKPMKSVLKGLGDMFRFGK
HRKEERLGEGAEPQETGGPRVGSTQASEEETLRMKQEQERIQAKTRELRERQARERDRPE
LRDIDRAFGPELEHGRVATRPSEPSPHGGHQRLQNPRDEPLYTHVGVSRNGRPPSADSNR
LAPSNHDRIRRLRQEFQQARQDDEGDEEQQQGYAHDQQWGGAGPYTPTGRHSVSVEIQLQ
RQRQDEREAFQQTQRKYSSLPRQPRKNLSTASQDSWDAGYPGGPGFSMAKADPRYASYQG
PRNGYLGAAGGGAGGGGFNARVLLEAQELLRQEQRRREQEAKAAATPPAQPPAPPASKGL
FRQDVPPSPSQLTRIGRLQALEKGHLFYS
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgcttcgggcggacccgcgtggtggtcccgtgcggagacggacac
atgacggtccagtgcctcatccagcaggccgtgatgcgctacaagaaggccatcgccaag
gagccgggctactggctacaggtgcaccgtctggagcacggcgatgggggcatcctggac
ctggacgacgtgctgtgcgacgtggccgatgacaaagaccgcctggtggcagtgtacgat
gagcaggacccccatcacggtggagacgggaccagtaccagttccaccggcacccagagt
cccgaccctttccatgcggccagtgagatcgaggtcaccacgtccatcctcaggaccaac
atgcctctgcaggtgcggcgaagcagcgatcccgccctggctggcctcagcacgtccttc
cgcgatgtccaggtgacgcgggcagagccgtcaaggcagcagcccacgcgctggtccacg
acggccggcttcctcaagccacgctccaccgtcgacagcctcgaatgccggggtcgggct
tcggaaacgtaccgcagccttcctcgggacagcagcgcctggggctcccacagaacgttc
cagagggaaagcgctcgcacctccatcggtgccgctccgcctctggaggacccctggttg
gagcgccaggacaagggcgaagaggtgggggagggggagaacggccgcatcgaacctgtt
ggcagggctgactccgggttggagcgcgtatcgagtccatccctcgacgacattgtcacg
ctggtggaagtgtccaacgatggcggccctttgggaatccacgtcgtgcctttcagttcg
cgtgaccgcagaacgctggggctcctggtgaagcgcctggagataggaggcaaggccgag
gagcaaggcctgttccgcgagaacgactgcatcgtccgcattaataacggggacctgcgc
aacgtccgcttcgagcaagcacagcagatgttccgccaggctatgaggtgtcccgtcatc
ctcttccacgtagtcccggtggcgaggaaggtccagtacgagcgactctctcagagcgag
aggagccccgcctgctcgcccggaccctgcggggtcgagacccggctcggcgagacgggc
ggcctgtcgggccgcggcgatcgcgccgcctgccgcgtgtcgcagacgggtccgcgcccc
cagcgcaagcccgaccctcaaggcaacgccccctccgagcccagcggcttccgctcgacc
ctacctcacgccgccgccgccggccccgcgggaaagcccccgccgggcccccctctgtcc
ccccagagacctcgaagctccacgcccacggtaggattcgccaggagggtcggccgtaag
ctcgacatccagctcaagaaaggtccggaagggctaggcttcagcatcacatcccgggac
gttcccctcgctggctccgcccccatattcgtgaagaacatcctcccacgtggggcggcg
attcaggatggccggctgaaggcgggtgaccgcctgctggaagtgaacagtgtggacctg
agtgggaggacgcaggagcaggtggtgggtcttctccgggccacgcctatgggcggaaca
gtggacctggtggtacttcggcaggaacaggaggataccttcccgagtcgggaagcgaac
accgcgccttggatgcagagtcctcgagatccgaagcgcttggcaagagaaggggtgtgt
cccgaggaaccctgcagccagattgagaaaacggaggaggaggagttggttctgacgccc
gacggaacccgcgagttcctgactctggagatcccgctcaacgactccggctcggccggc
ctgggcgtcagcgtcaagggcaaccgctccaaagagaaccacgctgacctgggcatcttc
gtcaagtccataatccatggtggagcggcgtgcaaggatgggcggctccatatcaatgac
cagctcattgcagtgaacggggaatcgttgctggggaagacgaaccaggacgccatggaa
acgctgcggatgtccatgtcggcccagggcaataagcggggcgcgatccagctcatcgtc
gcaagaagggttgcaaaactcaacgggtcggacctaccgctggatggttctgcggacgac
cacgagcgccgtatctctcactccctctacgagggtttggacgtggccccgataccagtg
agccccagcacggggaggattatgggtaactaccagctgtcgcccacggtgaacatgccc
caggacgacaccgtcatcatcgaggacgacgggccgactgctgttcccacccacctttct
gaccaatcgtcttgcagctcccacgacgatgtgggcgtggccatgcagtctcctgcccgc
tgggccccggagatgcagagcgactgcctggagcaggaccaggatatagatccggccgat
gccttccagagggagggcttcggacgccagagcgtgtcggaaaagcggaccaagcagtgt
ggtgacccctcccagccggaggccgtcaagacccgcaagtccaagagcatggacctagca
gctgctgaggataacaccgcttcccgctcggagtacgctgaaggatcctcgacacaggat
gtgggtccctcccttggccttaaaaagtccagctccctggagagcttgcagaccgccgtt
gccgaggcgatgctcaacggggacgtacccctccaccggccacgcccacggatcatacgt
gggaggggctgcaacgacagcttccgcgccgccatcgacaagtcttacgacaggatgccc
ccggagcaagacgatgaggatgtggaaacactcgaggaggacacggagggcagctcccgc
tcgggacgagactcggtgtccaccgtggaggcctgcgagaggcagttcaatggagggcgc
ctcaaggatgatcgcaagaaggagaagggagggaaggagaagaagaagcaggagaaggag
aagggcaagcccatgaagagcgtcctcaaaggcctgggggacatgtttcggttcggcaag
cacaggaaggaggagcgactgggtgagggggcggagcctcaggagacgggcggacccagg
gtggggtccacgcaggcctcggaggaggagacgctgcgcatgaagcaggagcaagagagg
atccaggccaaaaccagggagctccgcgagcggcaggcccgcgagagggaccgccctgag
ctccgggacatcgaccgggcgtttggccccgagctggaacacggacgcgttgcgaccaga
ccctcggagccctctccgcacggcggccaccagcgccttcagaacccccgagatgaaccg
ctgtacacacatgtgggcgtgtcgcgcaatggccgccctccctctgcagacagcaaccgc
ctggcgcccagcaaccacgaccggatacggcggctcaggcaggagttccagcaggccagg
caggacgatgagggggacgaggagcagcagcagggatacgcccatgaccagcagtggggg
ggcgccgggccgtacacaccgacgggacgccactcggtctctgtggagatccaactacag
cggcaacggcaggacgaaagggaggctttccagcagacacagaggaagtacagctcactg
ccacggcaaccccgcaagaacctgagcacggcgtcgcaggactcgtgggatgcgggatac
ccggggggcccgggcttctctatggccaaggcggacccccgctacgccagctaccagggt
cctcgcaacggctacctgggagctgccgggggcggggctgggggcggcggcttcaacgcc
cgtgtgctgctggaggcgcaagagctgctgaggcaggagcagcgccgcagggaacaggaa
gccaaggctgcggcgacaccccctgctcagcctcccgccccgcccgcctccaaggggctg
ttccggcaggatgtgccgccctcgccctcgcagctcaccaggatcggcaggctgcaggcg
ctcgagaagggccaccttttctattcgtga
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integrated database retrieval system
