Scleropages formosus (Asian bonytongue): 108937734
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Entry
108937734 CDS
T04919
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108937734 (ttf2)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108937734 (ttf2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
108937734
NCBI-ProteinID:
XP_029112461
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Position
12:13208058..13218389
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AA seq
1118 aa
AA seq
DB search
MELVVCDSHGRPCLLKTGVRDGATKGRSFYVCSARHGTPCDFTRAADIPPSHCLHHEDSL
VELQALIDRKQQAGYRLFFRCVLGKSEGKKWCGSVPWMEQKHCSSPPLNGESLLPSFPCE
RNPFKASKKTEKPSEWRNIQEGGDRTGEKTSVRQEEEGESEAERSNHSNDEHLKSNWRNE
QLPPGVRLKKKVTDEAQGSADLPPDSGPRQRPVIANAAKDLRPTSFDDRERRTGKKDQIQ
REQPLISKVQGKECGAGDQRWHKDAAKRAPKEGSSDLKMNHRSQESRRAEKGKEREILDK
GDRPEMDDEVLLVSVEPGTKQNFPAVTVSTNPVQTALTSFPGFQLTSRDKAKEEDPRVLH
NQLSIQLKQKKATLSTVNILALPDKGERLKNQVKELEVALESLSLTVATSSDDGEPESHT
SGEGVRTPAVAKQTKPLSNHGGTILLPDPPVSFPAGASCLALDLSQGNSQMYGVNAQGQA
LYGGRMTDSRLLAVHNATTEAIDHLHRSLESCPGPHTEERDPTGLKVPLLPHQRRALAWL
LWRETQKPCGGILADDMGLGKTLTMIALILAQKKTEEKVKKLEGWISKNDLSLVASHSTL
IICPASLIHHWKKEIERHVKSRHLSVYLYHGPNRKRNATFLAEHSVVVTTYSIVSKEVPA
EKDVEKPMQDSVGELPDVSPLLCVVWSRVILDEAHNIKNPKVQTSIAVCKLRAQARWAVT
GTPVQNNLLDMYALLKFLRCSPFDEYKLWKAQVDNGSKRGGERLNILTRALLLRRTKDEL
DLHGKPLVPLPERVCEVHQLKLSDDEQAVYDVIFARSRSTLESYLKRHEGGGSVTKKDTN
PFQKVAHEFGMSVPDAASSQHSGASNTVHILSLLLRLRQCCCHLSLLKKTLDESELQGDG
LTLSLEEQLSALSLSEHSSSHDPKGTVSLNGSRFRSELFDNTCASTKISAVLVELSKIRK
TNEAQKSVIVSQWTSMLHIVAVHLKKLGLRFAVIDGTVNPKQRMDLVEEFNTNPKGPQVM
LVSLCAGGVGINLVGGNHLFLMDMHWNPALEDQACDRIYRVGQTRNVTIHRFVCEGTVED
KISSLQQTKKELAKKVLSGTSASFTKLSLADLKIIFGV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggagctggttgtctgtgattcacatgggcgcccgtgcctgctgaagaccggggtgcga
gacggagccaccaagggcaggagcttctacgtgtgcagcgcgcgccacgggacgccgtgc
gacttcacgcgagcggccgacatccccccatcgcactgcttgcatcacgaagactctctt
gtggaactccaggctcttattgaccgcaaacagcaggcgggttacagattgttcttccga
tgtgttttgggaaaaagtgaagggaagaaatggtgtgggagtgtcccgtggatggagcag
aaacactgcagcagtcccccactaaatggagagtcactgcttcccagtttcccttgtgag
aggaacccattcaaagcctcaaagaaaactgaaaagccttcggagtggaggaacatccag
gaaggaggggataggacaggagagaagacgagtgtaaggcaagaagaggagggagaaagt
gaagcagagagaagcaatcattctaatgatgagcatttgaaatccaactggagaaacgag
cagctccctccgggtgtgagattaaagaagaaggtgacagatgaggctcagggcagtgct
gacctgccccctgacagtggacccagacaaagaccagtaattgcaaatgctgccaaagac
ttgcgtcctacttcgtttgatgacagagagaggagaactggcaagaaggaccagatccag
cgggaacagccactgatctctaaggttcaggggaaggaatgtggagctggagatcagcgt
tggcataaagatgctgctaagcgagctccaaaagaaggttcatcagatttaaaaatgaat
cacaggtctcaggaaagcagaagagcggaaaagggcaaagaaagggaaattctggataaa
ggagacaggcctgagatggacgatgaagtcctgttggtgtcagttgagccaggaaccaag
cagaactttccagctgttacagtatcaaccaaccctgtacagacagctctgacttcattc
cccgggttccagctgacgtcacgggacaaagcaaaggaggaggacccccgggtcctgcac
aatcagctctccatccagctcaagcagaaaaaggcaaccttgtcaacggtgaacattctg
gccttgcctgataaaggtgaaagactgaagaaccaagtaaaagagctggaggtagcgctg
gagtctttaagtctgactgttgccacatccagtgatgacggggaaccggaatcgcacaca
tccggtgaaggtgtaaggacacctgccgttgccaagcaaacaaaacctctcagcaaccat
gggggcaccatccttttgcctgatcctcctgtgtctttcccggctggtgccagctgtctg
gcgcttgacctcagccagggcaattcgcagatgtatggagtgaacgcacagggccaggca
ttgtacggggggaggatgacggacagtaggctgctagcagtgcacaatgctaccacggag
gcaatcgaccacctgcaccgctctctggagtcctgccccggcccgcacaccgaggagcgg
gaccccacgggactgaaggtccccttacttcctcatcaaagacgtgcgctggcctggctg
ctgtggagagagactcaaaagccgtgtggaggaattctggcggatgatatgggtctggga
aagactcttacgatgattgctctaattttggctcagaagaaaactgaagaaaaggttaag
aagctagagggatggatttccaaaaatgatttgtccctggttgcctcccacagcactttg
attatatgtcctgcttcacttatccaccattggaaaaaggagattgagagacacgttaag
agcaggcatttgagtgtgtacctttatcacgggcccaaccgaaagaggaatgcaaccttc
ttggcagaacacagtgtggttgttaccacctatagtattgtctctaaggaggttcccgct
gagaaagatgtggagaaacccatgcaggattcagtgggagagttgccagacgtgtctccg
ctcttatgtgttgtctggtcccgagtgattttggatgaggctcacaacattaagaacccc
aaggttcagacctcaatagctgtgtgcaaactcagggcccaggcccgctgggctgtcact
ggaactcctgtccagaacaacctcctggacatgtacgcgctactcaagtttctaaggtgc
tctccttttgatgaatacaaactgtggaaggctcaagttgataatggttccaagagggga
ggagaaaggctgaatattctcaccagggctctcctgcttcgcagaaccaaggacgaactg
gacttgcacggcaaacctctggtacctctgccagaacgagtctgtgaagtgcatcagtta
aaactgtcagatgatgaacaagctgtttatgatgttatttttgcacgatccagatcaact
ctggagtcgtacctgaagcgtcacgaagggggcgggtcagtcaccaaaaaggacacaaat
ccttttcagaaagtggctcatgagtttggcatgtctgtcccagatgctgcatcctcccag
cattctggagcctccaatactgtgcacattctgtcactgctgctgcggctgaggcagtgc
tgctgccacttgtccctgctgaagaagacgctagatgagtctgagctgcagggggatggg
ctcacactgtccttagaggagcagctgagtgccctatccctatcagaacactcttctagt
catgaccccaaaggcacagtatccctcaacggtagccgtttccgctctgagctctttgac
aacacctgcgcgagcaccaagatttctgcagtccttgtagaattatccaaaattagaaaa
acaaatgaggctcagaaaagtgtaattgtgtctcagtggaccagcatgctacacattgtg
gctgttcatttgaaaaagcttggcttgcgatttgctgtcattgatggcacggtcaacccc
aagcagcgaatggacctagtagaggaattcaacaccaaccccaagggaccacaggtgatg
ctggtgtcactatgtgctggaggtgtgggtattaacctggttggagggaaccaccttttc
cttatggatatgcactggaacccggctttggaggaccaggcctgcgaccgtatatacaga
gtggggcagacccgcaatgttaccatacacaggtttgtgtgtgagggtactgtcgaggac
aagatctcctcactgcagcagacgaagaaggagctagctaagaaggttctgtcagggaca
agtgcttccttcaccaagctctcacttgccgacctcaagattatctttggtgtatga
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