Scleropages formosus (Asian bonytongue): 108937799
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Entry
108937799 CDS
T04919
Name
(RefSeq) lumican-like
KO
K08122
lumican
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfm00535
]
108937799
Proteoglycans [BR:
sfm00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
108937799
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRRNT
LRR_6
LRR_9
LRR_Zer-1
DUF7743
DUF7409
LRR_EndoS
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108937799
NCBI-ProteinID:
XP_018613473
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All DBs
Position
5:20428293..20429940
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AA seq
437 aa
AA seq
DB search
MGYLHITVIVALVITTLCQDYDSGQYDTLVEEYDRYPLPEPDYDRFPQRQTDYDREPRPH
PDYDGFPQRQTDYDREPRPYPDYGRYPEPHPDYDRYRAQPDYESYIQPQPDYDSYAQPQP
DYDSYIPSTYPVIPRCALECDCPFHFPTAMYCNERNLHFIPVVPSGIKYLYLQNNMIQDI
KASVFENATDLLWLILDRNHISSENIEKGVFEKLVHLEKLFINYNNLTELMGPLPMSLNE
MSLIGNRLSKLPSETLVGLENLTALYLEGNELTSQTISGAFNGLKSLVYLDISNNNLKEL
PLGISNSLEVLYADQNIISSISSGYLQNLPVLQYLRISHNQLTDAGVPAGVFNLSSLLEL
DLSFNNLQSIPEVNENLENLYLQVNNINKFNISSFCGFSGASSRLTHLRLDGNHITRRDL
PLEIPMCLRRVTMFLID
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggttatctgcatataactgtcatagtggctctggtcatcaccaccctatgtcaagac
tatgactctggtcagtatgacacacttgtggaagaatatgaccgctatcccttacctgag
ccagactatgaccgctttcctcaacgtcagacagattatgaccgggaaccccgccctcat
ccagactatgatggctttcctcaacgtcagacagattatgaccgggaaccccgcccttat
ccagactatggccgctatcctgaacctcatccagactatgaccgctatcgtgctcagccg
gactatgaaagttacatccaacctcagccggactatgacagctacgcccaaccacaacct
gactatgacagttacattccaagtacttaccctgtgatccctcgctgtgctctggagtgt
gactgcccctttcatttccccactgccatgtactgcaatgaacgtaatctccacttcatt
cctgttgttccctctggaatcaagtacctgtacctgcagaataacatgatccaagacatc
aaggccagtgtttttgaaaatgctaccgacctcttgtggcttatcctagaccgcaatcac
atcagtagtgaaaacattgaaaagggtgtatttgagaagctagtccacctggagaagctg
tttatcaactacaacaacctgacggagctaatgggcccattaccaatgtccttaaatgag
atgagcttgattgggaacaggttgtcaaaattgccctcggaaacactggtggggttggaa
aatctaactgctttgtacctggaaggtaatgaactaacgtctcagactatttctggggcc
ttcaatggactcaagtctctcgtgtatctggacatcagtaacaacaacctcaaggagcta
ccccttggaatttccaactccctagaggttttatatgctgatcaaaacattatcagcagc
atctcaagtggctacctgcagaacctccctgtcctgcagtacctccggatctcccacaac
cagctgactgatgcaggggtccctgctggtgtcttcaacctctcctctctccttgagctt
gacctctcattcaacaacctgcagtccatccctgaggtgaatgagaacttggagaatctc
tacctccaggtcaacaacattaacaagttcaacatatctagtttctgcggattttcagga
gcttcctccagactgacacacctgcggcttgatggcaatcatataacgcgcagagacttg
cctttggagattcccatgtgcctccgtagggttactatgttcctaattgactag
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